RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 NUDCD1Q96RS6 583 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 EIF3CQ99613 913 aaKnown RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 SH3GL3Q99963 347 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 ORAI3Q9BRQ5 295 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 THUMPD3Q9BV44 507 aaKnown RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 KIFC3Q9BVG8 833 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 CRNKL1Q9BZJ0 848 aaKnown RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 ANKRD2Q9GZV1 360 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 PAIP1Q9H074 479 aaKnown RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 BTBD1Q9H0C5 482 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 INTS2Q9H0H0 1204 aaKnown RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 WDR26Q9H7D7 661 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 EMC7Q9NPA0 242 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 DLL4Q9NR61 685 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 POLE3Q9NRF9 147 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 IARS2Q9NSE4 1012 aaKnown RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 CATSPERZQ9NTU4 200 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 ATAD3AQ9NVI7 634 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 RIC8BQ9NVN3 520 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 HSPBP1Q9NZL4 362 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 EMC3Q9P0I2 261 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 VPS18Q9P253 973 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 ARHGAP20Q9P2F6 1191 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 MORF4L1Q9UBU8 362 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 ANAPC5Q9UJX4 755 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 CPSF3Q9UKF6 684 aaKnown RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 CBLCQ9ULV8 474 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 MYO6Q9UM54 1294 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 CAMK2AQ9UQM7 478 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 NIP7Q9Y221 180 aaKnown RBP eCLIP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 REXO2Q9Y3B8 237 aaKnown RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 ATP23Q9Y6H3 246 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 ROBO1Q9Y6N7 1651 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 MYO3BQ8WXR4 1341 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 MYH6P13533 1939 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 LAMB1P07942 1786 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 STRCQ7RTU9 1775 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 TTC26A0AVF1 554 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 POM121BA6NF01 834 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 H0YAE9 185 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 H0YCG3 227 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 GOLGA8SH3BPF8 625 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 SNAP23O00161 211 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 UBE2CO00762 179 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 PJA2O43164 708 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 PROM1O43490 865 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 SULT1B1O43704 296 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 B3GALT2O43825 422 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 EXTL3O43909 919 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 ZNF623O75123 536 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 ERAL1O75616 437 aaKnown RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 PRDM1O75626 825 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 FGF18O76093 207 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 KLHL18O94889 574 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 CRTAMO95727 393 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 OLFM2O95897 454 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 IFNB1P01574 187 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 IVLP07476 585 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 LTA4HP09960 611 aaKnown RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 UBTFL6P0CB48 400 aaPredicted RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 CSH1P0DML2 217 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 CSH2P0DML3 217 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 EPB41P11171 864 aaKnown RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 PRG2P13727 222 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 HNRNPLP14866 589 aaKnown RBP eCLIP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 PTPN2P17706 415 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 FGFR4P22455 802 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 CCNE1P24864 410 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 TNFRSF8P28908 595 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 CYLC1P35663 651 aaPredicted RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 PRCPP42785 496 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 HSPA7P48741 367 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 STAT5BP51692 787 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 ZNF41P51814 821 aaPredicted RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 HADHBP55084 474 aaKnown RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 HNRNPH2P55795 449 aaKnown RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 STX17P56962 302 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 MAP3K7CLP57077 242 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 JAM2P57087 298 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 ARPC4P59998 168 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 CKAP4Q07065 602 aaKnown RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 DMPKQ09013 629 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 TRAP1Q12931 704 aaKnown RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 MAMLD1Q13495 774 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 ITPK1Q13572 414 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 STIM1Q13586 685 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 DOC2AQ14183 400 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 LRRC32Q14392 662 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 GALNT3Q14435 633 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 NFE2L1Q14494 772 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 SQLEQ14534 574 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 CASP8Q14790 479 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 LASP1Q14847 261 aaKnown RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 KARSQ15046 597 aaKnown RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 ZNF174Q15697 407 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 HADHQ16836 314 aaKnown RBP4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 FLYWCH1Q4VC44 716 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 C12orf60Q5U649 245 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 BTBD8Q5XKL5 378 aa4.14□□□□□ -1.75
PRPF38B-205ENST00000485810 JMJD6Q6NYC1 403 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms