RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 SCINQ9Y6U3 715 aa5.85□□□□□ -1.47
CUX1-208ENST00000485792 CEP295Q9C0D2 2601 aa5.85□□□□□ -1.47
CUX1-208ENST00000485792 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.84□□□□□ -1.47
CUX1-208ENST00000485792 EDDM13A0A1B0GTR0 161 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 MUSKO15146 869 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 LATO43561 262 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 RHOBTB1O94844 696 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 MOCS3O95396 460 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 IGHV4-34P06331 123 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 TPM3P06753 285 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 EPHX1P07099 455 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 MIPP30301 263 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 OXTRP30559 389 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 GKP32189 559 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 EIF4A3P38919 411 aaKnown RBP5.84□□□□□ -1.47
CUX1-208ENST00000485792 DPP6P42658 865 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 MARCKSL1P49006 195 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 ADKP55263 362 aaKnown RBP5.84□□□□□ -1.47
CUX1-208ENST00000485792 YBEYP58557 167 aaPredicted RBP5.84□□□□□ -1.47
CUX1-208ENST00000485792 PPP2CBP62714 309 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 PPP2CAP67775 309 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 INSM1Q01101 510 aaPredicted RBP5.84□□□□□ -1.47
CUX1-208ENST00000485792 GNA12Q03113 381 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 GFPT1Q06210 699 aaPredicted RBP5.84□□□□□ -1.47
CUX1-208ENST00000485792 SPEM2Q0P670 501 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 ZNF177Q13360 481 aaPredicted RBP5.84□□□□□ -1.47
CUX1-208ENST00000485792 DPYSQ14117 519 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 PIGHQ14442 188 aaPredicted RBP5.84□□□□□ -1.47
CUX1-208ENST00000485792 ELAVL3Q14576 367 aaKnown RBP5.84□□□□□ -1.47
CUX1-208ENST00000485792 ARL13BQ3SXY8 428 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 ATP13A4Q4VNC1 1196 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 INO80DQ53TQ3 878 aaPredicted RBP5.84□□□□□ -1.47
CUX1-208ENST00000485792 ERMARDQ5T6L9 678 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 LCE2CQ5TA81 110 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 KCTD16Q68DU8 428 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 SERPINA13PQ6UXR4 307 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 LRRC31Q6UY01 552 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 LINGO4Q6UY18 593 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 LEKR1Q6ZMV7 388 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 DBX2Q6ZNG2 339 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 ARMCX6Q7L4S7 300 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 ZSWIM9Q86XI8 627 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 VSIG1Q86XK7 387 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 DEFB119Q8N690 84 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 RTL3Q8N8U3 475 aaKnown RBP5.84□□□□□ -1.47
CUX1-208ENST00000485792 CHST14Q8NCH0 376 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 TMIEQ8NEW7 156 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 OR2A12Q8NGT7 310 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 CPLX3Q8WVH0 158 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 TEKT4Q8WW24 435 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 RNF34Q969K3 372 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 ARRDC3Q96B67 414 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 SIPA1Q96FS4 1042 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 CIPCQ9C0C6 399 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 CEP44Q9C0F1 390 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 MAGEH1Q9H213 219 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 CAPN10Q9HC96 672 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 VPS45Q9NRW7 570 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 SEMA4GQ9NTN9 838 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 KLHL11Q9NVR0 708 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 ZDHHC3Q9NYG2 299 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 UVRAGQ9P2Y5 699 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 GGT7Q9UJ14 662 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 INTUQ9ULD6 942 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 PNMA8BQ9ULN7 279 aaPredicted RBP5.84□□□□□ -1.47
CUX1-208ENST00000485792 FZD4Q9ULV1 537 aa5.84□□□□□ -1.47
CUX1-208ENST00000485792 ZZEF1O43149 2961 aa5.84□□□□□ -1.48
CUX1-208ENST00000485792 ACACBO00763 2458 aa5.84□□□□□ -1.48
CUX1-208ENST00000485792 MAP1BP46821 2468 aaKnown RBP5.84□□□□□ -1.48
CUX1-208ENST00000485792 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 LNP1A1A4G5 178 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 C3orf70A6NLC5 250 aaPredicted RBP5.83□□□□□ -1.48
CUX1-208ENST00000485792 METTL12A8MUP2 240 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 UPK3BL1B0FP48 263 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 PRR5-ARHGAP8B1AHC4 643 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 ZNF487B1APH4 448 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 UPK3BL2E5RIL1 263 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 CDX4O14627 284 aaPredicted RBP5.83□□□□□ -1.48
CUX1-208ENST00000485792 FGF10O15520 208 aaPredicted RBP5.83□□□□□ -1.48
CUX1-208ENST00000485792 KDELR3O43731 214 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 WNT1P04628 370 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 TMEM253P0C7T8 217 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 GM2AP17900 193 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 C5AR1P21730 350 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 ITPKAP23677 461 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 MSX1P28360 303 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 CD6P30203 668 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 OR1E1P30953 314 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 ACSL1P33121 698 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 GMPRP36959 345 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 ETFBP38117 255 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 MPLP40238 635 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 SERPINH1P50454 418 aaKnown RBP5.83□□□□□ -1.48
CUX1-208ENST00000485792 ZNF75DP51815 510 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 NDST2P52849 883 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 ARHGAP8P85298 464 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 ZNF33AQ06730 810 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 ADCY2Q08462 1091 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 SERINC3Q13530 473 aa5.83□□□□□ -1.48
CUX1-208ENST00000485792 FGL2Q14314 439 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms