RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 TC2NQ8N9U0 490 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 KLK6Q92876 244 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 LRIG1Q96JA1 1093 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 FEM1CQ96JP0 617 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 SLC6A18Q96N87 628 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 KLHL32Q96NJ5 620 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 CSPG4P5Q96PW8 444 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 CINPQ9BW66 212 aaPredicted RBP12.71□□□□□ -0.37
PTCD1-205ENST00000485746 OSBPL1AQ9BXW6 950 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 GAREM1Q9H706 876 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 PCDH18Q9HCL0 1135 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 PREBQ9HCU5 417 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 OSGEPQ9NPF4 335 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 ANKRD6Q9Y2G4 727 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 WASF2Q9Y6W5 498 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 SDK1Q7Z5N4 2213 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 RIF1Q5UIP0 2472 aaKnown RBP12.71□□□□□ -0.37
PTCD1-205ENST00000485746 CKAP5Q14008 2032 aa12.71□□□□□ -0.38
PTCD1-205ENST00000485746 EP300Q09472 2414 aaPredicted RBP12.7□□□□□ -0.38
PTCD1-205ENST00000485746 A0A1W2PQU0 124 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 SLC31A1O15431 190 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 IPO7O95373 1038 aaKnown RBP12.7□□□□□ -0.38
PTCD1-205ENST00000485746 TNNT1P13805 278 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 ITGB7P26010 798 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 CD38P28907 300 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 NUDT1P36639 197 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 ARHGAP25P42331 645 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 GRIA4P48058 902 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 PPP2CBP62714 309 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 PPP2CAP67775 309 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 MMRN1Q13201 1228 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 HLA-BQ31612 363 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 ZNF805Q5CZA5 627 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 PIP5KL1Q5T9C9 394 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 NEK5Q6P3R8 708 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 LAYNQ6UX15 382 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 TTC7BQ86TV6 843 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 TRIM69Q86WT6 500 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 CCDC170Q8IYT3 715 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 BBS5Q8N3I7 341 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 RFFLQ8WZ73 363 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 EXOC2Q96KP1 924 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 MAK16Q9BXY0 300 aaKnown RBP12.7□□□□□ -0.38
PTCD1-205ENST00000485746 KLHL11Q9NVR0 708 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 IPO11Q9UI26 975 aaKnown RBP12.7□□□□□ -0.38
PTCD1-205ENST00000485746 INTUQ9ULD6 942 aa12.7□□□□□ -0.38
PTCD1-205ENST00000485746 C16orf96A6NNT2 1141 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 GOLGA6L6A8MZA4 724 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 RNF103O00237 685 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 MAGEC1O60732 1142 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 NEBLO76041 1014 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 ADRB3P13945 408 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 AKT2P31751 481 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 MAN1A1P33908 653 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 NOVA1P51513 510 aaKnown RBP12.69□□□□□ -0.38
PTCD1-205ENST00000485746 RENBPP51606 427 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 TAS2R40P59535 323 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 IL10RBQ08334 325 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 SGCGQ13326 291 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 RFTN1Q14699 578 aaPredicted RBP12.69□□□□□ -0.38
PTCD1-205ENST00000485746 GRM3Q14832 879 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 SUZ12Q15022 739 aaKnown RBP12.69□□□□□ -0.38
PTCD1-205ENST00000485746 PDK2Q15119 407 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 KIF19Q2TAC6 998 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 ATP13A4Q4VNC1 1196 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 NAPEPLDQ6IQ20 393 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 ARHGAP36Q6ZRI8 547 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 PARS2Q7L3T8 475 aaKnown RBP12.69□□□□□ -0.38
PTCD1-205ENST00000485746 HORMAD1Q86X24 394 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 ARHGAP12Q8IWW6 846 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 ATPAF2Q8N5M1 289 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 NPWQ8N729 165 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 C1orf216Q8TAB5 229 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 MYOCQ99972 504 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 EBF2Q9HAK2 575 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 ETNK2Q9NVF9 386 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 RCOR3Q9P2K3 495 aaPredicted RBP12.69□□□□□ -0.38
PTCD1-205ENST00000485746 DMTF1Q9Y222 760 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 MFHAS1Q9Y4C4 1052 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 PCDHB9Q9Y5E1 797 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 SNX11Q9Y5W9 270 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 SLCO1B1Q9Y6L6 691 aa12.69□□□□□ -0.38
PTCD1-205ENST00000485746 PLXND1Q9Y4D7 1925 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 RALGAPA1Q6GYQ0 2036 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 PRAMEF26H0Y7S4 382 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 KCNK3O14649 394 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 TM4SF5O14894 197 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 INSIG1O15503 277 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 SPOPO43791 374 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 KCNK5O95279 499 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 PRLRP16471 622 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 NAP1L1P55209 391 aaKnown RBP12.68□□□□□ -0.38
PTCD1-205ENST00000485746 TAS2R38P59533 333 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 RPS21P63220 83 aaKnown RBP12.68□□□□□ -0.38
PTCD1-205ENST00000485746 FOXK2Q01167 660 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 ZNF235Q14590 738 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 LBRQ14739 615 aaKnown RBP12.68□□□□□ -0.38
PTCD1-205ENST00000485746 ANKRD20A8PQ5CZ79 823 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 AFMIDQ63HM1 303 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 PSAPL1Q6NUJ1 521 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms