RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 TMEM95Q3KNT9 176 aa4.38□□□□□ -1.71
SMC4-215ENST00000484799 ZNF718Q3SXZ3 478 aa4.38□□□□□ -1.71
SMC4-215ENST00000484799 CCDC38Q502W7 563 aa4.38□□□□□ -1.71
SMC4-215ENST00000484799 TTC22Q5TAA0 569 aa4.38□□□□□ -1.71
SMC4-215ENST00000484799 WBP2NLQ6ICG8 309 aa4.38□□□□□ -1.71
SMC4-215ENST00000484799 DSTYKQ6XUX3 929 aa4.38□□□□□ -1.71
SMC4-215ENST00000484799 OTULINQ96BN8 352 aa4.38□□□□□ -1.71
SMC4-215ENST00000484799 ADGRG7Q96K78 797 aa4.38□□□□□ -1.71
SMC4-215ENST00000484799 RMDN3Q96TC7 470 aa4.38□□□□□ -1.71
SMC4-215ENST00000484799 WDR12Q9GZL7 423 aaKnown RBP4.38□□□□□ -1.71
SMC4-215ENST00000484799 PTPRHQ9HD43 1115 aa4.38□□□□□ -1.71
SMC4-215ENST00000484799 FBXO40Q9UH90 709 aa4.38□□□□□ -1.71
SMC4-215ENST00000484799 TARSL2A2RTX5 802 aaKnown RBP4.37□□□□□ -1.71
SMC4-215ENST00000484799 F5H423 210 aaPredicted RBP4.37□□□□□ -1.71
SMC4-215ENST00000484799 KRT36O76013 467 aa4.37□□□□□ -1.71
SMC4-215ENST00000484799 ITGB8P26012 769 aa4.37□□□□□ -1.71
SMC4-215ENST00000484799 PNPLA4P41247 253 aa4.37□□□□□ -1.71
SMC4-215ENST00000484799 BLMHQ13867 455 aa4.37□□□□□ -1.71
SMC4-215ENST00000484799 BYSLQ13895 437 aaKnown RBP4.37□□□□□ -1.71
SMC4-215ENST00000484799 MYBPC2Q14324 1141 aa4.37□□□□□ -1.71
SMC4-215ENST00000484799 PDCD2Q16342 344 aaPredicted RBP4.37□□□□□ -1.71
SMC4-215ENST00000484799 TIGD6Q17RP2 521 aa4.37□□□□□ -1.71
SMC4-215ENST00000484799 ANO1Q5XXA6 986 aa4.37□□□□□ -1.71
SMC4-215ENST00000484799 KLHL24Q6TFL4 600 aa4.37□□□□□ -1.71
SMC4-215ENST00000484799 SMAP1Q8IYB5 467 aaPredicted RBP4.37□□□□□ -1.71
SMC4-215ENST00000484799 RBFAQ8N0V3 343 aa4.37□□□□□ -1.71
SMC4-215ENST00000484799 ANKRD44Q8N8A2 993 aa4.37□□□□□ -1.71
SMC4-215ENST00000484799 DNAAF1Q8NEP3 725 aa4.37□□□□□ -1.71
SMC4-215ENST00000484799 RASSF8Q8NHQ8 419 aa4.37□□□□□ -1.71
SMC4-215ENST00000484799 OR1F2PQ96R84 312 aa4.37□□□□□ -1.71
SMC4-215ENST00000484799 PPCSQ9HAB8 311 aa4.37□□□□□ -1.71
SMC4-215ENST00000484799 GRHL1Q9NZI5 618 aa4.37□□□□□ -1.71
SMC4-215ENST00000484799 UPB1Q9UBR1 384 aa4.37□□□□□ -1.71
SMC4-215ENST00000484799 ERRFI1Q9UJM3 462 aaPredicted RBP4.37□□□□□ -1.71
SMC4-215ENST00000484799 AGO1Q9UL18 857 aaKnown RBP4.37□□□□□ -1.71
SMC4-215ENST00000484799 NFS1Q9Y697 457 aa4.37□□□□□ -1.71
SMC4-215ENST00000484799 SAA2-SAA4A0A096LPE2 208 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 A0A0A0MQY5 61 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 CCDC189A1A4V9 331 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 CLEC18AA5D8T8 446 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 PRSS47A8MTI9 375 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 FAM157AC9JC47 383 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 H0Y3Z8 333 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 NPHP1O15259 732 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 CLDN7O95471 211 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 METTL18O95568 372 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 CSTBP04080 98 aaKnown RBP4.36□□□□□ -1.71
SMC4-215ENST00000484799 TFPIP10646 304 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 ZNF12P17014 697 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 PDIA3P30101 505 aaKnown RBP4.36□□□□□ -1.71
SMC4-215ENST00000484799 MCM2P49736 904 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 HDAC4P56524 1084 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 CYP4A11Q02928 519 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 AP5B1Q2VPB7 878 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 XKR9Q5GH70 373 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 GSG1LQ6UXU4 331 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 ZNF329Q86UD4 541 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 ANKRD42Q8N9B4 389 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 CLEC18CQ8NCF0 446 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 MYRIPQ8NFW9 859 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 RBM17Q96I25 401 aaKnown RBP4.36□□□□□ -1.71
SMC4-215ENST00000484799 NAP1L4Q99733 375 aaKnown RBP4.36□□□□□ -1.71
SMC4-215ENST00000484799 MMTAG2Q9BU76 263 aaKnown RBP4.36□□□□□ -1.71
SMC4-215ENST00000484799 NPFFR1Q9GZQ6 430 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 PLEKHA2Q9HB19 425 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 SLC22A11Q9NSA0 550 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 TMEM51Q9NW97 253 aa4.36□□□□□ -1.71
SMC4-215ENST00000484799 IGLV5-37A0A075B6J1 123 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 A0A1B0GUV1 79 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 hCG_1642624A0A1W2PR95 340 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 TYW5A2RUC4 315 aaKnown RBP4.35□□□□□ -1.71
SMC4-215ENST00000484799 SRRM3A6NNA2 597 aaPredicted RBP4.35□□□□□ -1.71
SMC4-215ENST00000484799 ACKR2O00590 384 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 SLC25A17O43808 307 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 MTA2O94776 668 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 SOX30O94993 753 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 GAS8-AS1O95177 125 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 PPP1R3DO95685 299 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 ACP5P13686 325 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 AVPR2P30518 371 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 TRAPPC10P48553 1259 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 POU5F1BQ06416 359 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 IL13RA2Q14627 380 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 CPXCR1Q8N123 301 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 POC1AQ8NBT0 407 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 LILRB1Q8NHL6 650 aaPredicted RBP4.35□□□□□ -1.71
SMC4-215ENST00000484799 WFIKKN2Q8TEU8 576 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 CRB3Q9BUF7 120 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 NPLQ9BXD5 320 aaPredicted RBP4.35□□□□□ -1.71
SMC4-215ENST00000484799 ABHD16BQ9H3Z7 469 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 DDX31Q9H8H2 851 aaKnown RBP4.35□□□□□ -1.71
SMC4-215ENST00000484799 CHODLQ9H9P2 273 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 ZNF556Q9HAH1 456 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 SAYSD1Q9NPB0 183 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 KCNG2Q9UJ96 466 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 RCE1Q9Y256 329 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 CNPY2Q9Y2B0 182 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 PCDHAC2Q9Y5I4 1007 aa4.35□□□□□ -1.71
SMC4-215ENST00000484799 IGLV5-52A0A0A0MRZ9 124 aa4.34□□□□□ -1.71
SMC4-215ENST00000484799 ANP32CO43423 234 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms