RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 ANKRD52Q8NB46 1076 aa7.07□□□□□ -1.28
UBR3-210ENST00000484596 DNAAF1Q8NEP3 725 aa7.07□□□□□ -1.28
UBR3-210ENST00000484596 ADAMTS15Q8TE58 950 aa7.07□□□□□ -1.28
UBR3-210ENST00000484596 CLSTN3Q9BQT9 956 aa7.07□□□□□ -1.28
UBR3-210ENST00000484596 LMAN2LQ9H0V9 348 aa7.07□□□□□ -1.28
UBR3-210ENST00000484596 SPAG4Q9NPE6 437 aa7.07□□□□□ -1.28
UBR3-210ENST00000484596 ATP8A2Q9NTI2 1148 aa7.07□□□□□ -1.28
UBR3-210ENST00000484596 SLC25A10Q9UBX3 287 aaPredicted RBP7.07□□□□□ -1.28
UBR3-210ENST00000484596 POLG2Q9UHN1 485 aa7.07□□□□□ -1.28
UBR3-210ENST00000484596 TRBV5-7A0A0A0MS05 114 aa7.06□□□□□ -1.28
UBR3-210ENST00000484596 C17orf102A2RUQ5 167 aa7.06□□□□□ -1.28
UBR3-210ENST00000484596 PGPEP1LA6NFU8 196 aa7.06□□□□□ -1.28
UBR3-210ENST00000484596 TNPO2O14787 897 aaKnown RBP7.06□□□□□ -1.28
UBR3-210ENST00000484596 USO1O60763 962 aaKnown RBP7.06□□□□□ -1.28
UBR3-210ENST00000484596 YWHAQP27348 245 aa7.06□□□□□ -1.28
UBR3-210ENST00000484596 ABCD3P28288 659 aa7.06□□□□□ -1.28
UBR3-210ENST00000484596 BLKP51451 505 aa7.06□□□□□ -1.28
UBR3-210ENST00000484596 RPE65Q16518 533 aa7.06□□□□□ -1.28
UBR3-210ENST00000484596 PXDC1Q5TGL8 231 aa7.06□□□□□ -1.28
UBR3-210ENST00000484596 C16orf54Q6UWD8 224 aa7.06□□□□□ -1.28
UBR3-210ENST00000484596 BHLHA9Q7RTU4 235 aa7.06□□□□□ -1.28
UBR3-210ENST00000484596 CHD1LQ86WJ1 897 aa7.06□□□□□ -1.28
UBR3-210ENST00000484596 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.06□□□□□ -1.28
UBR3-210ENST00000484596 ZDHHC23Q8IYP9 409 aa7.06□□□□□ -1.28
UBR3-210ENST00000484596 TBC1D22AQ8WUA7 517 aa7.06□□□□□ -1.28
UBR3-210ENST00000484596 ELP4Q96EB1 424 aa7.06□□□□□ -1.28
UBR3-210ENST00000484596 ZNF419Q96HQ0 510 aaPredicted RBP7.06□□□□□ -1.28
UBR3-210ENST00000484596 TREX2Q9BQ50 279 aaPredicted RBP7.06□□□□□ -1.28
UBR3-210ENST00000484596 TMEM79Q9BSE2 394 aa7.06□□□□□ -1.28
UBR3-210ENST00000484596 PNRC2Q9NPJ4 139 aaKnown RBP7.06□□□□□ -1.28
UBR3-210ENST00000484596 MRC2Q9UBG0 1479 aa7.05□□□□□ -1.28
UBR3-210ENST00000484596 FSD2A1L4K1 749 aa7.05□□□□□ -1.28
UBR3-210ENST00000484596 ADAM10O14672 748 aa7.05□□□□□ -1.28
UBR3-210ENST00000484596 SPTLC2O15270 562 aa7.05□□□□□ -1.28
UBR3-210ENST00000484596 TMEM63AO94886 807 aa7.05□□□□□ -1.28
UBR3-210ENST00000484596 ADAP00813 363 aa7.05□□□□□ -1.28
UBR3-210ENST00000484596 NR4A2P43354 598 aa7.05□□□□□ -1.28
UBR3-210ENST00000484596 ENTPD8Q5MY95 495 aa7.05□□□□□ -1.28
UBR3-210ENST00000484596 NCAPH2Q6IBW4 605 aa7.05□□□□□ -1.28
UBR3-210ENST00000484596 B4GALNT4Q76KP1 1039 aa7.05□□□□□ -1.28
UBR3-210ENST00000484596 PRSS45Q7RTY3 260 aa7.05□□□□□ -1.28
UBR3-210ENST00000484596 MRPL10Q7Z7H8 261 aaKnown RBP7.05□□□□□ -1.28
UBR3-210ENST00000484596 TMC8Q8IU68 726 aa7.05□□□□□ -1.28
UBR3-210ENST00000484596 ZMIZ2Q8NF64 920 aa7.05□□□□□ -1.28
UBR3-210ENST00000484596 UBE2Q2Q8WVN8 375 aa7.05□□□□□ -1.28
UBR3-210ENST00000484596 ERP27Q96DN0 273 aa7.05□□□□□ -1.28
UBR3-210ENST00000484596 ZNF333Q96JL9 665 aa7.05□□□□□ -1.28
UBR3-210ENST00000484596 AAMDCQ9H7C9 122 aa7.05□□□□□ -1.28
UBR3-210ENST00000484596 TRNAU1APQ9NX07 287 aaKnown RBP7.05□□□□□ -1.28
UBR3-210ENST00000484596 IL1RAPL1Q9NZN1 696 aa7.05□□□□□ -1.28
UBR3-210ENST00000484596 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.05□□□□□ -1.28
UBR3-210ENST00000484596 GAGE12JA6NER3 117 aa7.04□□□□□ -1.28
UBR3-210ENST00000484596 ZNF500O60304 480 aaPredicted RBP7.04□□□□□ -1.28
UBR3-210ENST00000484596 CEP104O60308 925 aa7.04□□□□□ -1.28
UBR3-210ENST00000484596 CHMP24386 653 aa7.04□□□□□ -1.28
UBR3-210ENST00000484596 CCT4P50991 539 aaKnown RBP7.04□□□□□ -1.28
UBR3-210ENST00000484596 GAD2Q05329 585 aa7.04□□□□□ -1.28
UBR3-210ENST00000484596 MTX1Q13505 466 aa7.04□□□□□ -1.28
UBR3-210ENST00000484596 EDRF1Q3B7T1 1238 aa7.04□□□□□ -1.28
UBR3-210ENST00000484596 SHC4Q6S5L8 630 aa7.04□□□□□ -1.28
UBR3-210ENST00000484596 BRINP3Q76B58 766 aa7.04□□□□□ -1.28
UBR3-210ENST00000484596 RRM2BQ7LG56 351 aa7.04□□□□□ -1.28
UBR3-210ENST00000484596 R3HCC1LQ7Z5L2 792 aaKnown RBP7.04□□□□□ -1.28
UBR3-210ENST00000484596 MON1AQ86VX9 555 aa7.04□□□□□ -1.28
UBR3-210ENST00000484596 CAMK1DQ8IU85 385 aa7.04□□□□□ -1.28
UBR3-210ENST00000484596 NFKBIDQ8NI38 313 aa7.04□□□□□ -1.28
UBR3-210ENST00000484596 EME1Q96AY2 570 aa7.04□□□□□ -1.28
UBR3-210ENST00000484596 PDCL3Q9H2J4 239 aa7.04□□□□□ -1.28
UBR3-210ENST00000484596 KRT84Q9NSB2 600 aa7.04□□□□□ -1.28
UBR3-210ENST00000484596 DECR2Q9NUI1 292 aa7.04□□□□□ -1.28
UBR3-210ENST00000484596 ARHGAP10A1A4S6 786 aa7.03□□□□□ -1.28
UBR3-210ENST00000484596 TARSL2A2RTX5 802 aaKnown RBP7.03□□□□□ -1.28
UBR3-210ENST00000484596 FAM157AC9JC47 383 aa7.03□□□□□ -1.28
UBR3-210ENST00000484596 TCERG1O14776 1098 aaKnown RBP7.03□□□□□ -1.28
UBR3-210ENST00000484596 ZC3H11AO75152 810 aaKnown RBP eCLIP7.03□□□□□ -1.28
UBR3-210ENST00000484596 MYZAPP0CAP1 466 aa7.03□□□□□ -1.28
UBR3-210ENST00000484596 PTPN9P43378 593 aa7.03□□□□□ -1.28
UBR3-210ENST00000484596 ALDH7A1P49419 539 aaKnown RBP7.03□□□□□ -1.28
UBR3-210ENST00000484596 PLCD1P51178 756 aa7.03□□□□□ -1.28
UBR3-210ENST00000484596 CCR9P51686 369 aa7.03□□□□□ -1.28
UBR3-210ENST00000484596 YWHAZP63104 245 aaKnown RBP7.03□□□□□ -1.28
UBR3-210ENST00000484596 SRSF1Q07955 248 aaKnown RBP eCLIP7.03□□□□□ -1.28
UBR3-210ENST00000484596 RBMS2Q15434 407 aaKnown RBP7.03□□□□□ -1.28
UBR3-210ENST00000484596 INPP5JQ15735 1006 aaPredicted RBP7.03□□□□□ -1.28
UBR3-210ENST00000484596 PRICKLE4Q2TBC4 344 aa7.03□□□□□ -1.28
UBR3-210ENST00000484596 FAM69AQ5T7M9 428 aa7.03□□□□□ -1.28
UBR3-210ENST00000484596 ARFGAP1Q8N6T3 406 aa7.03□□□□□ -1.28
UBR3-210ENST00000484596 NANOGP1Q8N7R0 232 aa7.03□□□□□ -1.28
UBR3-210ENST00000484596 C11orf65Q8NCR3 313 aa7.03□□□□□ -1.28
UBR3-210ENST00000484596 CMASQ8NFW8 434 aaPredicted RBP7.03□□□□□ -1.28
UBR3-210ENST00000484596 MSRB1Q9NZV6 116 aa7.03□□□□□ -1.28
UBR3-210ENST00000484596 NLKQ9UBE8 527 aa7.03□□□□□ -1.28
UBR3-210ENST00000484596 CDH22Q9UJ99 828 aa7.03□□□□□ -1.28
UBR3-210ENST00000484596 HS3ST3B1Q9Y662 390 aa7.03□□□□□ -1.28
UBR3-210ENST00000484596 PDS5BQ9NTI5 1447 aa7.02□□□□□ -1.29
UBR3-210ENST00000484596 A0A096LPK6 155 aa7.02□□□□□ -1.29
UBR3-210ENST00000484596 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.02□□□□□ -1.29
UBR3-210ENST00000484596 PI4KAP2A4QPH2 592 aa7.02□□□□□ -1.29
UBR3-210ENST00000484596 ZNF814B7Z6K7 855 aa7.02□□□□□ -1.29
UBR3-210ENST00000484596 F9P00740 461 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms