RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 WDR6Q9NNW5 1121 aaKnown RBP4.52□□□□□ -1.69
SCAF11-207ENST00000484275 CHST12Q9NRB3 414 aa4.52□□□□□ -1.69
SCAF11-207ENST00000484275 THAP1Q9NVV9 213 aa4.52□□□□□ -1.69
SCAF11-207ENST00000484275 NDUFAF4Q9P032 175 aa4.52□□□□□ -1.69
SCAF11-207ENST00000484275 NLKQ9UBE8 527 aa4.52□□□□□ -1.69
SCAF11-207ENST00000484275 BAG5Q9UL15 447 aa4.52□□□□□ -1.69
SCAF11-207ENST00000484275 A0A087WV62 115 aa4.51□□□□□ -1.69
SCAF11-207ENST00000484275 MAGEA13PA6NCF6 341 aa4.51□□□□□ -1.69
SCAF11-207ENST00000484275 SYT5O00445 386 aa4.51□□□□□ -1.69
SCAF11-207ENST00000484275 XPNPEP2O43895 674 aa4.51□□□□□ -1.69
SCAF11-207ENST00000484275 CCNT1O60563 726 aaKnown RBP4.51□□□□□ -1.69
SCAF11-207ENST00000484275 SERPINF1P36955 418 aa4.51□□□□□ -1.69
SCAF11-207ENST00000484275 PTPN9P43378 593 aa4.51□□□□□ -1.69
SCAF11-207ENST00000484275 MTNR1AP48039 350 aa4.51□□□□□ -1.69
SCAF11-207ENST00000484275 MVDP53602 400 aa4.51□□□□□ -1.69
SCAF11-207ENST00000484275 HDAC1Q13547 482 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-207ENST00000484275 KLHL17Q6TDP4 642 aa4.51□□□□□ -1.69
SCAF11-207ENST00000484275 C9orf139Q6ZV77 190 aa4.51□□□□□ -1.69
SCAF11-207ENST00000484275 TMC8Q8IU68 726 aa4.51□□□□□ -1.69
SCAF11-207ENST00000484275 NAGSQ8N159 534 aa4.51□□□□□ -1.69
SCAF11-207ENST00000484275 ZNF527Q8NB42 609 aa4.51□□□□□ -1.69
SCAF11-207ENST00000484275 ARNT2Q9HBZ2 717 aa4.51□□□□□ -1.69
SCAF11-207ENST00000484275 TMEM51Q9NW97 253 aa4.51□□□□□ -1.69
SCAF11-207ENST00000484275 HDAC6Q9UBN7 1215 aa4.51□□□□□ -1.69
SCAF11-207ENST00000484275 ADAM18Q9Y3Q7 739 aa4.51□□□□□ -1.69
SCAF11-207ENST00000484275 KRTAP9-6A8MVA2 160 aa4.5□□□□□ -1.69
SCAF11-207ENST00000484275 FAM157AC9JC47 383 aa4.5□□□□□ -1.69
SCAF11-207ENST00000484275 CHL1O00533 1208 aa4.5□□□□□ -1.69
SCAF11-207ENST00000484275 CBX6O95503 412 aa4.5□□□□□ -1.69
SCAF11-207ENST00000484275 PAK4O96013 591 aaPredicted RBP4.5□□□□□ -1.69
SCAF11-207ENST00000484275 YWHAQP27348 245 aa4.5□□□□□ -1.69
SCAF11-207ENST00000484275 SSTR2P30874 369 aa4.5□□□□□ -1.69
SCAF11-207ENST00000484275 SKIV2L2P42285 1042 aaKnown RBP4.5□□□□□ -1.69
SCAF11-207ENST00000484275 BTKQ06187 659 aa4.5□□□□□ -1.69
SCAF11-207ENST00000484275 AP5B1Q2VPB7 878 aa4.5□□□□□ -1.69
SCAF11-207ENST00000484275 STPG1Q5TH74 334 aa4.5□□□□□ -1.69
SCAF11-207ENST00000484275 FAM69BQ5VUD6 431 aa4.5□□□□□ -1.69
SCAF11-207ENST00000484275 SULT6B1Q6IMI4 303 aa4.5□□□□□ -1.69
SCAF11-207ENST00000484275 ATG16L2Q8NAA4 619 aa4.5□□□□□ -1.69
SCAF11-207ENST00000484275 STT3BQ8TCJ2 826 aa4.5□□□□□ -1.69
SCAF11-207ENST00000484275 PLEKHA2Q9HB19 425 aa4.5□□□□□ -1.69
SCAF11-207ENST00000484275 ARFGAP3Q9NP61 516 aa4.5□□□□□ -1.69
SCAF11-207ENST00000484275 NFS1Q9Y697 457 aa4.5□□□□□ -1.69
SCAF11-207ENST00000484275 NOTCH3Q9UM47 2321 aa4.5□□□□□ -1.69
SCAF11-207ENST00000484275 CLGNO14967 610 aa4.49□□□□□ -1.69
SCAF11-207ENST00000484275 CH25HO95992 272 aa4.49□□□□□ -1.69
SCAF11-207ENST00000484275 CSF1P09603 554 aa4.49□□□□□ -1.69
SCAF11-207ENST00000484275 AMD1P17707 334 aa4.49□□□□□ -1.69
SCAF11-207ENST00000484275 FMO4P31512 558 aa4.49□□□□□ -1.69
SCAF11-207ENST00000484275 GLIPR1P48060 266 aa4.49□□□□□ -1.69
SCAF11-207ENST00000484275 FAM27E3Q08E93 113 aa4.49□□□□□ -1.69
SCAF11-207ENST00000484275 RPE65Q16518 533 aa4.49□□□□□ -1.69
SCAF11-207ENST00000484275 SYT13Q7L8C5 426 aa4.49□□□□□ -1.69
SCAF11-207ENST00000484275 DCUN1D3Q8IWE4 304 aa4.49□□□□□ -1.69
SCAF11-207ENST00000484275 AADATQ8N5Z0 425 aa4.49□□□□□ -1.69
SCAF11-207ENST00000484275 NEK9Q8TD19 979 aa4.49□□□□□ -1.69
SCAF11-207ENST00000484275 TBC1D22AQ8WUA7 517 aa4.49□□□□□ -1.69
SCAF11-207ENST00000484275 PGLYRP2Q96PD5 576 aa4.49□□□□□ -1.69
SCAF11-207ENST00000484275 TRAPPC9Q96Q05 1148 aa4.49□□□□□ -1.69
SCAF11-207ENST00000484275 NLRC4Q9NPP4 1024 aa4.49□□□□□ -1.69
SCAF11-207ENST00000484275 LRFN1Q9P244 771 aa4.49□□□□□ -1.69
SCAF11-207ENST00000484275 DHDHQ9UQ10 334 aa4.49□□□□□ -1.69
SCAF11-207ENST00000484275 A0A096LPK6 155 aa4.48□□□□□ -1.69
SCAF11-207ENST00000484275 OR6C68A6NDL8 312 aa4.48□□□□□ -1.69
SCAF11-207ENST00000484275 ACKR2O00590 384 aa4.48□□□□□ -1.69
SCAF11-207ENST00000484275 CAND2O75155 1236 aa4.48□□□□□ -1.69
SCAF11-207ENST00000484275 TFRCP02786 760 aaKnown RBP4.48□□□□□ -1.69
SCAF11-207ENST00000484275 RPL3P39023 403 aaKnown RBP4.48□□□□□ -1.69
SCAF11-207ENST00000484275 GPR12P47775 334 aa4.48□□□□□ -1.69
SCAF11-207ENST00000484275 CAPSQ13938 189 aa4.48□□□□□ -1.69
SCAF11-207ENST00000484275 IL13RA2Q14627 380 aa4.48□□□□□ -1.69
SCAF11-207ENST00000484275 LPIN1Q14693 890 aa4.48□□□□□ -1.69
SCAF11-207ENST00000484275 EXOC3L1Q86VI1 746 aa4.48□□□□□ -1.69
SCAF11-207ENST00000484275 CCDC117Q8IWD4 279 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-207ENST00000484275 ANKRD44Q8N8A2 993 aa4.48□□□□□ -1.69
SCAF11-207ENST00000484275 SETD9Q8NE22 299 aa4.48□□□□□ -1.69
SCAF11-207ENST00000484275 RASSF8Q8NHQ8 419 aa4.48□□□□□ -1.69
SCAF11-207ENST00000484275 DDX23Q9BUQ8 820 aaKnown RBP4.48□□□□□ -1.69
SCAF11-207ENST00000484275 TLR8Q9NR97 1041 aaKnown RBP4.48□□□□□ -1.69
SCAF11-207ENST00000484275 TMLHEQ9NVH6 421 aa4.48□□□□□ -1.69
SCAF11-207ENST00000484275 MORC2Q9Y6X9 1032 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-207ENST00000484275 WDR81Q562E7 1941 aa4.48□□□□□ -1.69
SCAF11-207ENST00000484275 H0Y3Z8 333 aa4.47□□□□□ -1.69
SCAF11-207ENST00000484275 STRNO43815 780 aa4.47□□□□□ -1.69
SCAF11-207ENST00000484275 SKAP2O75563 359 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-207ENST00000484275 VNN2O95498 520 aa4.47□□□□□ -1.69
SCAF11-207ENST00000484275 KRT18P05783 430 aaKnown RBP4.47□□□□□ -1.69
SCAF11-207ENST00000484275 IGHV4-30-4P0DP06 118 aa4.47□□□□□ -1.69
SCAF11-207ENST00000484275 SERPINB3P29508 390 aa4.47□□□□□ -1.69
SCAF11-207ENST00000484275 GJC1P36383 396 aa4.47□□□□□ -1.69
SCAF11-207ENST00000484275 PEX5P50542 639 aa4.47□□□□□ -1.69
SCAF11-207ENST00000484275 BRWD1-AS2P59051 145 aa4.47□□□□□ -1.69
SCAF11-207ENST00000484275 ARHGAP8P85298 464 aa4.47□□□□□ -1.69
SCAF11-207ENST00000484275 SLC18A2Q05940 514 aa4.47□□□□□ -1.69
SCAF11-207ENST00000484275 BYSLQ13895 437 aaKnown RBP4.47□□□□□ -1.69
SCAF11-207ENST00000484275 ME3Q16798 604 aa4.47□□□□□ -1.69
SCAF11-207ENST00000484275 FBXO43Q4G163 708 aa4.47□□□□□ -1.69
SCAF11-207ENST00000484275 RUNDC3AQ59EK9 446 aa4.47□□□□□ -1.69
SCAF11-207ENST00000484275 HIST2H2BCQ6DN03 193 aa4.47□□□□□ -1.69
SCAF11-207ENST00000484275 NCAPH2Q6IBW4 605 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms