RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 LY6G6EA0A0G2JKS1 128 aa18.33■□□□□ 0.52
ATG4B-221ENST00000483778 TCRBV5S1A1TA0A578 114 aa18.33■□□□□ 0.52
ATG4B-221ENST00000483778 PIAS2O75928 621 aa18.33■□□□□ 0.52
ATG4B-221ENST00000483778 ACP1P24666 158 aa18.33■□□□□ 0.52
ATG4B-221ENST00000483778 ITPKBP27987 946 aa18.33■□□□□ 0.52
ATG4B-221ENST00000483778 SDC4P31431 198 aa18.33■□□□□ 0.52
ATG4B-221ENST00000483778 STAT1P42224 750 aa18.33■□□□□ 0.52
ATG4B-221ENST00000483778 SEMG2Q02383 582 aa18.33■□□□□ 0.52
ATG4B-221ENST00000483778 FZD2Q14332 565 aa18.33■□□□□ 0.52
ATG4B-221ENST00000483778 CLEC16AQ2KHT3 1053 aa18.33■□□□□ 0.52
ATG4B-221ENST00000483778 APTXQ7Z2E3 356 aaKnown RBP18.33■□□□□ 0.52
ATG4B-221ENST00000483778 TMC6Q7Z403 805 aa18.33■□□□□ 0.52
ATG4B-221ENST00000483778 DCBLD2Q96PD2 775 aa18.33■□□□□ 0.52
ATG4B-221ENST00000483778 BBC3Q96PG8 261 aaPredicted RBP18.33■□□□□ 0.52
ATG4B-221ENST00000483778 KLF6Q99612 283 aaPredicted RBP18.33■□□□□ 0.52
ATG4B-221ENST00000483778 TMEM51Q9NW97 253 aa18.33■□□□□ 0.52
ATG4B-221ENST00000483778 TMEM248Q9NWD8 314 aa18.33■□□□□ 0.52
ATG4B-221ENST00000483778 ADAM22Q9P0K1 906 aa18.33■□□□□ 0.52
ATG4B-221ENST00000483778 U3KQA8 63 aa18.33■□□□□ 0.52
ATG4B-221ENST00000483778 PTPRQQ9UMZ3 2332 aa18.33■□□□□ 0.52
ATG4B-221ENST00000483778 COL27A1Q8IZC6 1860 aaPredicted RBP18.33■□□□□ 0.52
ATG4B-221ENST00000483778 A0A087WV48 116 aa18.32■□□□□ 0.52
ATG4B-221ENST00000483778 C16orf96A6NNT2 1141 aa18.32■□□□□ 0.52
ATG4B-221ENST00000483778 NEBLO76041 1014 aa18.32■□□□□ 0.52
ATG4B-221ENST00000483778 KRT3P12035 628 aa18.32■□□□□ 0.52
ATG4B-221ENST00000483778 CCDC15Q0P6D6 951 aa18.32■□□□□ 0.52
ATG4B-221ENST00000483778 LRRC73Q5JTD7 316 aa18.32■□□□□ 0.52
ATG4B-221ENST00000483778 STRADAQ7RTN6 431 aa18.32■□□□□ 0.52
ATG4B-221ENST00000483778 RYBPQ8N488 228 aaPredicted RBP18.32■□□□□ 0.52
ATG4B-221ENST00000483778 OR4C6Q8NH72 309 aa18.32■□□□□ 0.52
ATG4B-221ENST00000483778 BAP1Q92560 729 aa18.32■□□□□ 0.52
ATG4B-221ENST00000483778 ISG20Q96AZ6 181 aaKnown RBP18.32■□□□□ 0.52
ATG4B-221ENST00000483778 FEM1CQ96JP0 617 aa18.32■□□□□ 0.52
ATG4B-221ENST00000483778 C1QTNF2Q9BXJ5 285 aa18.32■□□□□ 0.52
ATG4B-221ENST00000483778 SCUBE2Q9NQ36 999 aa18.32■□□□□ 0.52
ATG4B-221ENST00000483778 GPR27Q9NS67 375 aa18.32■□□□□ 0.52
ATG4B-221ENST00000483778 LIMA1Q9UHB6 759 aaKnown RBP18.32■□□□□ 0.52
ATG4B-221ENST00000483778 HS3ST3A1Q9Y663 406 aa18.32■□□□□ 0.52
ATG4B-221ENST00000483778 KRIT1O00522 736 aa18.31■□□□□ 0.52
ATG4B-221ENST00000483778 RPL7AP62424 266 aaKnown RBP18.31■□□□□ 0.52
ATG4B-221ENST00000483778 RPS21P63220 83 aaKnown RBP18.31■□□□□ 0.52
ATG4B-221ENST00000483778 MYLK3Q32MK0 819 aa18.31■□□□□ 0.52
ATG4B-221ENST00000483778 ARL13BQ3SXY8 428 aa18.31■□□□□ 0.52
ATG4B-221ENST00000483778 FKBP15Q5T1M5 1219 aa18.31■□□□□ 0.52
ATG4B-221ENST00000483778 TRIM72Q6ZMU5 477 aa18.31■□□□□ 0.52
ATG4B-221ENST00000483778 PTAR1Q7Z6K3 402 aaPredicted RBP18.31■□□□□ 0.52
ATG4B-221ENST00000483778 PHF13Q86YI8 300 aaPredicted RBP18.31■□□□□ 0.52
ATG4B-221ENST00000483778 PLPP6Q8IY26 295 aa18.31■□□□□ 0.52
ATG4B-221ENST00000483778 TBC1D31Q96DN5 1066 aa18.31■□□□□ 0.52
ATG4B-221ENST00000483778 PPP1R16AQ96I34 528 aa18.31■□□□□ 0.52
ATG4B-221ENST00000483778 MAGEH1Q9H213 219 aa18.31■□□□□ 0.52
ATG4B-221ENST00000483778 DNAJC28Q9NX36 388 aa18.31■□□□□ 0.52
ATG4B-221ENST00000483778 PNMA8BQ9ULN7 279 aaPredicted RBP18.31■□□□□ 0.52
ATG4B-221ENST00000483778 AK5Q9Y6K8 562 aa18.31■□□□□ 0.52
ATG4B-221ENST00000483778 SIGLEC16A6NMB1 481 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 LGALS16A8MUM7 142 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 INSIG1O15503 277 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 CCP110O43303 1012 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 KDELR3O43731 214 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 AP1G1O43747 822 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 UGT2B4P06133 528 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 CDK4P11802 303 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 GPD1P21695 349 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 HNF1BP35680 557 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 MAPKAPK2P49137 400 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 OGDHQ02218 1023 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 ILKQ13418 452 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 RTP5Q14D33 572 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 NCAPHQ15003 741 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 POLD3Q15054 466 aaPredicted RBP18.3■□□□□ 0.52
ATG4B-221ENST00000483778 ZNF805Q5CZA5 627 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 MON1BQ7L1V2 547 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 DNAAF5Q86Y56 855 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 RFFLQ8WZ73 363 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 APOLD1Q96LR9 279 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 PCMTD1Q96MG8 357 aaPredicted RBP18.3■□□□□ 0.52
ATG4B-221ENST00000483778 KLHL32Q96NJ5 620 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 AGPAT1Q99943 283 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 RAI2Q9Y5P3 530 aa18.3■□□□□ 0.52
ATG4B-221ENST00000483778 SPTY2D1-AS1A0A0U1RR47 76 aa18.29■□□□□ 0.52
ATG4B-221ENST00000483778 LRRC10BA6NIK2 292 aa18.29■□□□□ 0.52
ATG4B-221ENST00000483778 A6NNZ2 444 aa18.29■□□□□ 0.52
ATG4B-221ENST00000483778 K7ESM1 405 aa18.29■□□□□ 0.52
ATG4B-221ENST00000483778 CASC3O15234 703 aaKnown RBP18.29■□□□□ 0.52
ATG4B-221ENST00000483778 RAMP2O60895 175 aa18.29■□□□□ 0.52
ATG4B-221ENST00000483778 POP4O95707 220 aaKnown RBP18.29■□□□□ 0.52
ATG4B-221ENST00000483778 MT-CO3P00414 261 aa18.29■□□□□ 0.52
ATG4B-221ENST00000483778 EIF2S3P41091 472 aaKnown RBP18.29■□□□□ 0.52
ATG4B-221ENST00000483778 NSFP46459 744 aaKnown RBP18.29■□□□□ 0.52
ATG4B-221ENST00000483778 GSCP56915 257 aaPredicted RBP18.29■□□□□ 0.52
ATG4B-221ENST00000483778 DAB2P98082 770 aa18.29■□□□□ 0.52
ATG4B-221ENST00000483778 UBXN1Q04323 297 aa18.29■□□□□ 0.52
ATG4B-221ENST00000483778 PPP1R15BQ5SWA1 713 aa18.29■□□□□ 0.52
ATG4B-221ENST00000483778 KIAA1161Q6NSJ0 714 aa18.29■□□□□ 0.52
ATG4B-221ENST00000483778 SCYL2Q6P3W7 929 aa18.29■□□□□ 0.52
ATG4B-221ENST00000483778 SLFN11Q7Z7L1 901 aa18.29■□□□□ 0.52
ATG4B-221ENST00000483778 DCBLD1Q8N8Z6 715 aa18.29■□□□□ 0.52
ATG4B-221ENST00000483778 NEK11Q8NG66 645 aa18.29■□□□□ 0.52
ATG4B-221ENST00000483778 OR2AP1Q8NGE2 309 aa18.29■□□□□ 0.52
ATG4B-221ENST00000483778 NTAN1Q96AB6 310 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms