RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 ADGRF1Q5T601 910 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 FSTL4Q6MZW2 842 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 PKN3Q6P5Z2 889 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 TIFABQ6ZNK6 161 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 STRA8Q7Z7C7 330 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 LINC00523Q86TU6 105 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 KCNMB4Q86W47 210 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 CCDC63Q8NA47 563 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 CCDC197Q8NCU1 140 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 TTC16Q8NEE8 873 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 CDKL2Q92772 493 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 FATE1Q969F0 183 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 MTBPQ96DY7 904 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 CAB39LQ9H9S4 337 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 TRPC7Q9HCX4 862 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 ATP13A1Q9HD20 1204 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 C20orf96Q9NUD7 363 aaPredicted RBP8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 GGA2Q9UJY4 613 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 PHTF1Q9UMS5 762 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 PCDHB12Q9Y5F1 795 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 PRRC2BQ5JSZ5 2229 aaKnown RBP8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 MAGEB16A2A368 324 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 HIDE1A8MVS5 230 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 MYO1CO00159 1063 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 NEBLO76041 1014 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 PRKCGP05129 697 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 DNAJB1P25685 340 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 GP5P40197 560 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 RGRP47804 291 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 ARCN1P48444 511 aaKnown RBP8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 SERPINB4P48594 390 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 MAPKAPK2P49137 400 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 GEMP55040 296 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 YBEYP58557 167 aaPredicted RBP8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 LBRQ14739 615 aaKnown RBP8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 VEPH1Q14D04 833 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 STXBP5Q5T5C0 1151 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 C16orf46Q6P387 395 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 PSRC1Q6PGN9 363 aaPredicted RBP8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 LILRA6Q6PI73 481 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 OTOAQ7RTW8 1153 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 DENND6AQ8IWF6 608 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 TDHQ8IZJ6 230 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 ARMC2Q8NEN0 867 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 CCT6BQ92526 530 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 CLP1Q92989 425 aaKnown RBP8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 BHMTQ93088 406 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 TADA1Q96BN2 335 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 RMDN2Q96LZ7 410 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 VPS11Q9H270 941 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 ZNF395Q9H8N7 513 aaPredicted RBP8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 RXFP1Q9HBX9 757 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 ENTPD7Q9NQZ7 604 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 IARS2Q9NSE4 1012 aaKnown RBP8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 ZNF358Q9NW07 568 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 UXTQ9UBK9 157 aaPredicted RBP8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 PRKAG3Q9UGI9 489 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 MTO1Q9Y2Z2 717 aaKnown RBP8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 USP15Q9Y4E8 981 aaPredicted RBP8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 SLC4A7Q9Y6M7 1214 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 EDF1O60869 148 aaKnown RBP8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 VAPBO95292 243 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 MBL2P11226 248 aaPredicted RBP8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 PPM1AP35813 382 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 SERPINB9P50453 376 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 EPHB3P54753 998 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 IRX4P78413 519 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 SMAD3P84022 425 aaKnown RBP8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 CYP4F8P98187 520 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 TNK2Q07912 1038 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 CTBP1Q13363 440 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 MPP3Q13368 585 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 SEPT7Q16181 437 aaKnown RBP8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 PCID2Q5JVF3 399 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 IL31Q6EBC2 164 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 CXorf57Q6NSI4 855 aaKnown RBP8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 RINLQ6ZS11 566 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 SPATA21Q7Z572 469 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 DCLK2Q8N568 766 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 LRRC8CQ8TDW0 803 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 PLD4Q96BZ4 506 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 EXOC2Q96KP1 924 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 RBBP8Q99708 897 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 CPNE1Q99829 537 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 SEMA3CQ99985 751 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 SPON2Q9BUD6 331 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 LRRC3Q9BY71 257 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 CERS4Q9HA82 394 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 TREX1Q9NSU2 369 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 ABCF3Q9NUQ8 709 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 DONSONQ9NYP3 566 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 EMCNQ9ULC0 261 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 INSL6Q9Y581 213 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 KIAA1671Q9BY89 1806 aa8.95□□□□□ -0.98
CDC42SE1-204ENST00000483763 CHD5Q8TDI0 1954 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 CCL22O00626 93 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 HGSO14964 777 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 PSMD3O43242 534 aa8.94□□□□□ -0.98
CDC42SE1-204ENST00000483763 TLL1O43897 1013 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms