RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 KLC1Q07866 573 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 ADIGQ0VDE8 80 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 PDE1CQ14123 709 aaPredicted RBP8.27□□□□□ -1.09
SORT1-205ENST00000483508 PCLAFQ15004 111 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 GSTA3Q16772 222 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 USP41Q3LFD5 358 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 UBXN11Q5T124 520 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 TEDDM1Q5T9Z0 273 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 TMCO4Q5TGY1 634 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 SNX30Q5VWJ9 437 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 ITPRIPL1Q6GPH6 555 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 CAPRIN2Q6IMN6 1127 aaKnown RBP8.27□□□□□ -1.09
SORT1-205ENST00000483508 SPATA31D4Q6ZUB0 917 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 RFX8Q6ZV50 586 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 ASCL5Q7RTU5 278 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 ADGRG6Q86SQ4 1221 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 TTC7BQ86TV6 843 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 PIGZQ86VD9 579 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 LCA5Q86VQ0 697 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 FAM131BQ86XD5 332 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 TREML1Q86YW5 311 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 COLGALT2Q8IYK4 626 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 SIX6OS1Q8N1H7 587 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 B3GALNT2Q8NCR0 500 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 RBM15BQ8NDT2 890 aaKnown RBP8.27□□□□□ -1.09
SORT1-205ENST00000483508 FAM149B1Q96BN6 582 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 PGAP3Q96FM1 320 aaPredicted RBP8.27□□□□□ -1.09
SORT1-205ENST00000483508 RBBP8Q99708 897 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 VN1R3Q9BXE9 311 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 NXF3Q9H4D5 531 aaKnown RBP8.27□□□□□ -1.09
SORT1-205ENST00000483508 LRRC4Q9HBW1 653 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.27□□□□□ -1.09
SORT1-205ENST00000483508 NMRK1Q9NWW6 199 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 NSMCE4AQ9NXX6 385 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 BFARQ9NZS9 450 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 ARMCX1Q9P291 453 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 TRHDEQ9UKU6 1024 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 EMCNQ9ULC0 261 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 CA14Q9ULX7 337 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 SOX13Q9UN79 622 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 DNAJC16Q9Y2G8 782 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 GIT1Q9Y2X7 761 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 HES2Q9Y543 173 aa8.27□□□□□ -1.09
SORT1-205ENST00000483508 MYO18AQ92614 2054 aaKnown RBP8.26□□□□□ -1.09
SORT1-205ENST00000483508 SHROOM3Q8TF72 1996 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 M0QYT0 321 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 CYB561D2O14569 222 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 TIMM44O43615 452 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 PI15O43692 258 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 B4GALT3O60512 393 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 LILRB3O75022 631 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 RFPL2O75678 378 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 AP2A1O95782 977 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 GSRP00390 522 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 F9P00740 461 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 ALDOAP04075 364 aaKnown RBP8.26□□□□□ -1.09
SORT1-205ENST00000483508 FAM200BP0CF97 657 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 PTPN1P18031 435 aaKnown RBP8.26□□□□□ -1.09
SORT1-205ENST00000483508 AKAP5P24588 427 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 LMO2P25791 158 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 TKTP29401 623 aaKnown RBP8.26□□□□□ -1.09
SORT1-205ENST00000483508 TYK2P29597 1187 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 SERPINB6P35237 376 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 GRIA1P42261 906 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 ABL2P42684 1182 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 LIMK2P53671 638 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 ALDH18A1P54886 795 aaKnown RBP8.26□□□□□ -1.09
SORT1-205ENST00000483508 SESN2P58004 480 aaPredicted RBP8.26□□□□□ -1.09
SORT1-205ENST00000483508 ACTR3P61158 418 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 ABCE1P61221 599 aaKnown RBP8.26□□□□□ -1.09
SORT1-205ENST00000483508 RPL10AP62906 217 aaKnown RBP8.26□□□□□ -1.09
SORT1-205ENST00000483508 COG7P83436 770 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 MXRA7P84157 204 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 DSG1Q02413 1049 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 ZNF33AQ06730 810 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 PPIDQ08752 370 aaKnown RBP8.26□□□□□ -1.09
SORT1-205ENST00000483508 TUBB3Q13509 450 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 THOC5Q13769 683 aaKnown RBP8.26□□□□□ -1.09
SORT1-205ENST00000483508 ANGPT1Q15389 498 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 ARL13BQ3SXY8 428 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 HSF5Q4G112 596 aaPredicted RBP8.26□□□□□ -1.09
SORT1-205ENST00000483508 DCAF6Q58WW2 860 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 FSCBQ5H9T9 825 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 GLRA4Q5JXX5 417 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 RABGAP1LQ5R372 815 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 OTUD1Q5VV17 481 aaPredicted RBP8.26□□□□□ -1.09
SORT1-205ENST00000483508 ARMC3Q5W041 872 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 CES4AQ5XG92 561 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 ANO7Q6IWH7 933 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 FUT10Q6P4F1 479 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 GET4Q7L5D6 327 aaPredicted RBP8.26□□□□□ -1.09
SORT1-205ENST00000483508 TAS1R1Q7RTX1 841 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 MYLK4Q86YV6 388 aaPredicted RBP8.26□□□□□ -1.09
SORT1-205ENST00000483508 ULK2Q8IYT8 1036 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 ZNF567Q8N184 647 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 PYROXD2Q8N2H3 581 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 TMEM86AQ8N2M4 240 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 DTWD2Q8NBA8 298 aa8.26□□□□□ -1.09
SORT1-205ENST00000483508 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.26□□□□□ -1.09
SORT1-205ENST00000483508 SMG8Q8ND04 991 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms