RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 RGL4Q8IZJ4 473 aa16.84■□□□□ 0.29
HMGN1-214ENST00000482733 SYCE1Q8N0S2 351 aa16.84■□□□□ 0.29
HMGN1-214ENST00000482733 NETO2Q8NC67 525 aa16.84■□□□□ 0.29
HMGN1-214ENST00000482733 RNF25Q96BH1 459 aaPredicted RBP16.84■□□□□ 0.29
HMGN1-214ENST00000482733 ZNF830Q96NB3 372 aaPredicted RBP16.84■□□□□ 0.29
HMGN1-214ENST00000482733 CPEB1Q9BZB8 566 aaKnown RBP16.84■□□□□ 0.29
HMGN1-214ENST00000482733 GOLPH3Q9H4A6 298 aa16.84■□□□□ 0.29
HMGN1-214ENST00000482733 C6orf106Q9H6K1 298 aaPredicted RBP16.84■□□□□ 0.29
HMGN1-214ENST00000482733 LHX3Q9UBR4 397 aa16.84■□□□□ 0.29
HMGN1-214ENST00000482733 ADGRG1Q9Y653 693 aa16.84■□□□□ 0.29
HMGN1-214ENST00000482733 FRYLO94915 3013 aa16.84■□□□□ 0.29
HMGN1-214ENST00000482733 APOL1O14791 398 aa16.83■□□□□ 0.28
HMGN1-214ENST00000482733 KHNYNO15037 678 aaKnown RBP16.83■□□□□ 0.28
HMGN1-214ENST00000482733 PLRG1O43660 514 aaKnown RBP16.83■□□□□ 0.28
HMGN1-214ENST00000482733 MFSD11O43934 449 aa16.83■□□□□ 0.28
HMGN1-214ENST00000482733 MAFKO60675 156 aa16.83■□□□□ 0.28
HMGN1-214ENST00000482733 ZRANB2O95218 330 aaKnown RBP eCLIP16.83■□□□□ 0.28
HMGN1-214ENST00000482733 GARSP41250 739 aaKnown RBP16.83■□□□□ 0.28
HMGN1-214ENST00000482733 MAPK8P45983 427 aa16.83■□□□□ 0.28
HMGN1-214ENST00000482733 METAP1P53582 386 aa16.83■□□□□ 0.28
HMGN1-214ENST00000482733 TFDP2Q14188 446 aa16.83■□□□□ 0.28
HMGN1-214ENST00000482733 LBRQ14739 615 aaKnown RBP16.83■□□□□ 0.28
HMGN1-214ENST00000482733 DUOXA1Q1HG43 343 aa16.83■□□□□ 0.28
HMGN1-214ENST00000482733 POM121L1PQ3SYA9 428 aa16.83■□□□□ 0.28
HMGN1-214ENST00000482733 ZNF805Q5CZA5 627 aa16.83■□□□□ 0.28
HMGN1-214ENST00000482733 ATXN7L2Q5T6C5 722 aaPredicted RBP16.83■□□□□ 0.28
HMGN1-214ENST00000482733 AGBL4Q5VU57 503 aa16.83■□□□□ 0.28
HMGN1-214ENST00000482733 KIAA0895LQ68EN5 471 aa16.83■□□□□ 0.28
HMGN1-214ENST00000482733 SLC9A4Q6AI14 798 aa16.83■□□□□ 0.28
HMGN1-214ENST00000482733 TIGD7Q6NT04 549 aaPredicted RBP16.83■□□□□ 0.28
HMGN1-214ENST00000482733 NCEH1Q6PIU2 408 aa16.83■□□□□ 0.28
HMGN1-214ENST00000482733 RNF10Q8N5U6 811 aaKnown RBP16.83■□□□□ 0.28
HMGN1-214ENST00000482733 OR6K2Q8NGY2 324 aa16.83■□□□□ 0.28
HMGN1-214ENST00000482733 ARRDC3Q96B67 414 aa16.83■□□□□ 0.28
HMGN1-214ENST00000482733 RBM41Q96IZ5 413 aaKnown RBP16.83■□□□□ 0.28
HMGN1-214ENST00000482733 PSKH2Q96QS6 385 aa16.83■□□□□ 0.28
HMGN1-214ENST00000482733 PREBQ9HCU5 417 aa16.83■□□□□ 0.28
HMGN1-214ENST00000482733 PARD6AQ9NPB6 346 aa16.83■□□□□ 0.28
HMGN1-214ENST00000482733 EVLQ9UI08 416 aaPredicted RBP16.83■□□□□ 0.28
HMGN1-214ENST00000482733 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.83■□□□□ 0.28
HMGN1-214ENST00000482733 MACROD2A1Z1Q3 448 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 CCDC66A2RUB6 948 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 FAM47DPA6NHR8 397 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 KRT86O43790 486 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 FSBPO95073 299 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 CTNNA1P35221 906 aaKnown RBP16.82■□□□□ 0.28
HMGN1-214ENST00000482733 CCR5P51681 352 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 NEK3P51956 506 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 LMNB2Q03252 620 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 ZNF235Q14590 738 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 TAZQ16635 292 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 PIP5KL1Q5T9C9 394 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 NEK5Q6P3R8 708 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 MFSD7Q6UXD7 560 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 GDPD4Q6W3E5 623 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 PRR23CQ6ZRP0 262 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 BZW1Q7L1Q6 419 aaKnown RBP16.82■□□□□ 0.28
HMGN1-214ENST00000482733 RFX6Q8HWS3 928 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 KIAA2013Q8IYS2 634 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 LRRC57Q8N9N7 239 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 C12orf50Q8NA57 414 aaPredicted RBP16.82■□□□□ 0.28
HMGN1-214ENST00000482733 EXD1Q8NHP7 514 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 HCAR2Q8TDS4 363 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 UBE2Q2Q8WVN8 375 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 FATE1Q969F0 183 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 RAB7BQ96AH8 199 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 TSGA13Q96PP4 275 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 TUBGCP5Q96RT8 1024 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 TMEM74BQ9NUR3 256 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 HAUS2Q9NVX0 235 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 PCDHA3Q9Y5H8 950 aa16.82■□□□□ 0.28
HMGN1-214ENST00000482733 RIF1Q5UIP0 2472 aaKnown RBP16.82■□□□□ 0.28
HMGN1-214ENST00000482733 TBC1D3DA0A087WVF3 549 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 TBC1D3IA0A087WXS9 549 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 TBC1D3EA0A087X179 549 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 TBC1D3KA0A087X1G2 549 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 GRID2IPA4D2P6 1211 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 TBC1D3FA6NER0 549 aaPredicted RBP16.81■□□□□ 0.28
HMGN1-214ENST00000482733 PRR5-ARHGAP8B1AHC4 643 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 TBC1D3LB9A6J9 549 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 PLK4O00444 970 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 PEX11BO96011 259 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 UGT2B4P06133 528 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 CCDC175P0C221 793 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 TBC1D3HP0C7X1 549 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 CCNCP24863 283 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 CTNNA2P26232 953 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 CD27P26842 260 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 GKP32189 559 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 NUDT1P36639 197 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 CDKN2BP42772 138 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 COPS2P61201 443 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 ARHGAP8P85298 464 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 GBE1Q04446 702 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 SLC10A7Q0GE19 358 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 HNRNPDQ14103 355 aaKnown RBP16.81■□□□□ 0.28
HMGN1-214ENST00000482733 CCDC6Q16204 474 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 TFDP3Q5H9I0 405 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 MARC1Q5VT66 337 aa16.81■□□□□ 0.28
HMGN1-214ENST00000482733 TBC1D3GQ6DHY5 549 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms