RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 NYNRINQ9P2P1 1898 aaKnown RBP12.44□□□□□ -0.42
TRA2B-212ENST00000480461 TARSL2A2RTX5 802 aaKnown RBP12.43□□□□□ -0.42
TRA2B-212ENST00000480461 KCNK1O00180 336 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 MATN3O15232 486 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 INSIG1O15503 277 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 ABCB7O75027 752 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 CTSLP07711 333 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 GABRG2P18507 467 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 TGM2P21980 687 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 METAP1P53582 386 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 ST8SIA6P61647 398 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 OTUD4Q01804 1114 aaKnown RBP12.43□□□□□ -0.42
TRA2B-212ENST00000480461 PPIDQ08752 370 aaKnown RBP12.43□□□□□ -0.42
TRA2B-212ENST00000480461 NOMO1Q15155 1222 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 ATXN7L2Q5T6C5 722 aaPredicted RBP12.43□□□□□ -0.42
TRA2B-212ENST00000480461 PAPD7Q5XG87 772 aaKnown RBP12.43□□□□□ -0.42
TRA2B-212ENST00000480461 SDE2Q6IQ49 451 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 C22orf39Q6P5X5 142 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 UNQ6494/PRO21346Q6UXR6 183 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 DPY19L3Q6ZPD9 716 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 TRMT11Q7Z4G4 463 aaKnown RBP12.43□□□□□ -0.42
TRA2B-212ENST00000480461 ZC3H18Q86VM9 953 aaKnown RBP12.43□□□□□ -0.42
TRA2B-212ENST00000480461 LRRC49Q8IUZ0 686 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 RASGEF1CQ8N431 466 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 TEX26Q8N6G2 289 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 CNTD1Q8N815 330 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 MAML1Q92585 1016 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 P3H4Q92791 437 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 ISG20Q96AZ6 181 aaKnown RBP12.43□□□□□ -0.42
TRA2B-212ENST00000480461 HDAC11Q96DB2 347 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 MRGPRX1Q96LB2 322 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 OSBPL9Q96SU4 736 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 CD93Q9NPY3 652 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 SMARCAL1Q9NZC9 954 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 UBA2Q9UBT2 640 aaPredicted RBP12.43□□□□□ -0.42
TRA2B-212ENST00000480461 SUN2Q9UH99 717 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 SNX12Q9UMY4 172 aa12.43□□□□□ -0.42
TRA2B-212ENST00000480461 EDDM13A0A1B0GTR0 161 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 ZSCAN5CA6NGD5 496 aaPredicted RBP12.42□□□□□ -0.42
TRA2B-212ENST00000480461 APOC4-APOC2K7ER74 178 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 MCF2LO15068 1137 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 CEP104O60308 925 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 TJP3O95049 919 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 APOC2P02655 101 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 NDUFV2P19404 249 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 NNMTP40261 264 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 CLCN6P51797 869 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 DGKEP52429 567 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 RPS14P62263 151 aaKnown RBP12.42□□□□□ -0.42
TRA2B-212ENST00000480461 ETF1P62495 437 aaKnown RBP12.42□□□□□ -0.42
TRA2B-212ENST00000480461 WASHC5Q12768 1159 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 ZBTB17Q13105 803 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 LBRQ14739 615 aaKnown RBP12.42□□□□□ -0.42
TRA2B-212ENST00000480461 PDK1Q15118 436 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 PRKD1Q15139 912 aaPredicted RBP12.42□□□□□ -0.42
TRA2B-212ENST00000480461 CCDC6Q16204 474 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 KCTD19Q17RG1 926 aaPredicted RBP12.42□□□□□ -0.42
TRA2B-212ENST00000480461 CARD16Q5EG05 197 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 HEATR6Q6AI08 1181 aaKnown RBP12.42□□□□□ -0.42
TRA2B-212ENST00000480461 RASSF3Q86WH2 238 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 TMPRSS6Q8IU80 811 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 PLPP6Q8IY26 295 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 ATPAF2Q8N5M1 289 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 FRMD1Q8N878 549 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 C12orf50Q8NA57 414 aaPredicted RBP12.42□□□□□ -0.42
TRA2B-212ENST00000480461 CCNYQ8ND76 341 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 MDGA1Q8NFP4 955 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 OR6K2Q8NGY2 324 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 ATG4AQ8WYN0 398 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 FATE1Q969F0 183 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 EXOC2Q96KP1 924 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 ZNF599Q96NL3 588 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 TM6SF2Q9BZW4 377 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 CEP44Q9C0F1 390 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 RSPH9Q9H1X1 276 aaPredicted RBP12.42□□□□□ -0.42
TRA2B-212ENST00000480461 SP110Q9HB58 689 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 USP29Q9HBJ7 922 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 PPM1HQ9ULR3 514 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 SLC8A2Q9UPR5 921 aa12.42□□□□□ -0.42
TRA2B-212ENST00000480461 TCRBV21S2A2A0A5A6 115 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 BNIP3LO60238 219 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 SYNCRIPO60506 623 aaKnown RBP12.41□□□□□ -0.42
TRA2B-212ENST00000480461 KCNK5O95279 499 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 JCHAINP01591 159 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 FGGP02679 453 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 ZNF806P0C7X5 589 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 CCNB1P14635 433 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 PRLRP16471 622 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 MX2P20592 715 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 HOXA6P31267 233 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 CETN2P41208 172 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 GEMIN4P57678 1058 aaKnown RBP12.41□□□□□ -0.42
TRA2B-212ENST00000480461 AP1B1Q10567 949 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 HNRNPDQ14103 355 aaKnown RBP12.41□□□□□ -0.42
TRA2B-212ENST00000480461 MYLK3Q32MK0 819 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 ARSIQ5FYB1 569 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 STPG1Q5TH74 334 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 SYT10Q6XYQ8 523 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 CEP68Q76N32 757 aa12.41□□□□□ -0.42
TRA2B-212ENST00000480461 MMAAQ8IVH4 418 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms