RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 ZSWIM3Q96MP5 696 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 CYP2S1Q96SQ9 504 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 KXD1Q9BQD3 176 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 DDX23Q9BUQ8 820 aaKnown RBP6.38□□□□□ -1.39
SF3B1-209ENST00000479532 TRMT61BQ9BVS5 477 aaKnown RBP6.38□□□□□ -1.39
SF3B1-209ENST00000479532 NUP85Q9BW27 656 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 LGR4Q9BXB1 951 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 TSGA10Q9BZW7 698 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 RNF38Q9H0F5 515 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 THAP2Q9H0W7 228 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 BRD9Q9H8M2 597 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 KCNK12Q9HB15 430 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.38□□□□□ -1.39
SF3B1-209ENST00000479532 OSER1Q9NX31 292 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 DUS2Q9NX74 493 aaKnown RBP6.38□□□□□ -1.39
SF3B1-209ENST00000479532 COX16Q9P0S2 106 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 CTTNBP2NLQ9P2B4 639 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 CFAP97Q9P2B7 532 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 IP6K2Q9UHH9 426 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 SFMBT1Q9UHJ3 866 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 ANAPC7Q9UJX3 599 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 TMEM59LQ9UK28 342 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 NUDT5Q9UKK9 219 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 PCDHA13Q9Y5I0 950 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 NUMBLQ9Y6R0 609 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 DOCK8Q8NF50 2099 aa6.38□□□□□ -1.39
SF3B1-209ENST00000479532 BRWD1Q9NSI6 2320 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 TCF20Q9UGU0 1960 aaKnown RBP6.37□□□□□ -1.39
SF3B1-209ENST00000479532 A0A1W2PQU0 124 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 GOLGA6L9A6NEM1 432 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 C2CD4BA6NLJ0 364 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 FAM170BA6NMN3 283 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 MYO1FO00160 1098 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 MAP2K7O14733 419 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 MDM4O15151 490 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 CHADO15335 359 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 IRAK2O43187 625 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 STC2O76061 302 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 LCA5LO95447 670 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 PRAMEF12O95522 483 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 NFATC1O95644 943 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 TBX18O95935 607 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 CYP1A2P05177 515 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 FAM87AP0C7U9 286 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 CD247P20963 164 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 FCARP24071 287 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 PSMA2P25787 234 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 CORO1AP31146 461 aaKnown RBP6.37□□□□□ -1.39
SF3B1-209ENST00000479532 GDI1P31150 447 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 RFC1P35251 1148 aaPredicted RBP6.37□□□□□ -1.39
SF3B1-209ENST00000479532 CHKAP35790 457 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 FLT3P36888 993 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 VIPR2P41587 438 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 MAGEA8P43361 318 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 PGFP49763 221 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 AIF1P55008 147 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 NAP1L1P55209 391 aaKnown RBP6.37□□□□□ -1.39
SF3B1-209ENST00000479532 KIF5AQ12840 1032 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 MAMLD1Q13495 774 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 PIGHQ14442 188 aaPredicted RBP6.37□□□□□ -1.39
SF3B1-209ENST00000479532 PPP2R5DQ14738 602 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 TAF5Q15542 800 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 ELF2Q15723 593 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 ZNF77Q15935 545 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 HADHQ16836 314 aaKnown RBP6.37□□□□□ -1.39
SF3B1-209ENST00000479532 CDO1Q16878 200 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 PREPLQ4J6C6 727 aaPredicted RBP6.37□□□□□ -1.39
SF3B1-209ENST00000479532 ANKRD39Q53RE8 183 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 SYPL2Q5VXT5 272 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 AP1ARQ63HQ0 302 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 TANGO2Q6ICL3 276 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 VITQ6UXI7 678 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 TTLL10Q6ZVT0 673 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 HTR3DQ70Z44 454 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 TAX1BP1Q86VP1 789 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 ZNF227Q86WZ6 799 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 APLFQ8IW19 511 aaPredicted RBP6.37□□□□□ -1.39
SF3B1-209ENST00000479532 CCDC117Q8IWD4 279 aaPredicted RBP6.37□□□□□ -1.39
SF3B1-209ENST00000479532 REXO1L1PQ8IX06 675 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 UBALD2Q8IYN6 164 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 CPA6Q8N4T0 437 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 EMC1Q8N766 993 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 ZNF513Q8N8E2 541 aaPredicted RBP6.37□□□□□ -1.39
SF3B1-209ENST00000479532 LRRN4CLQ8ND94 238 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 ADCY4Q8NFM4 1077 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 JOSD2Q8TAC2 188 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 ZNF564Q8TBZ8 553 aaPredicted RBP6.37□□□□□ -1.39
SF3B1-209ENST00000479532 FNIP1Q8TF40 1166 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 FAM172AQ8WUF8 416 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 OSCP1Q8WVF1 389 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 RFFLQ8WZ73 363 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 DNASE1L2Q92874 299 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 FGF14Q92915 247 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 PGAP3Q96FM1 320 aaPredicted RBP6.37□□□□□ -1.39
SF3B1-209ENST00000479532 PIWIL1Q96J94 861 aaKnown RBP6.37□□□□□ -1.39
SF3B1-209ENST00000479532 BTN2A3PQ96KV6 586 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 C16orf45Q96MC5 204 aaPredicted RBP6.37□□□□□ -1.39
SF3B1-209ENST00000479532 CFAP57Q96MR6 1250 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 SLC22A12Q96S37 553 aa6.37□□□□□ -1.39
SF3B1-209ENST00000479532 UHRF1Q96T88 793 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms