RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 ZNF518BQ9C0D4 1074 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 TNFRSF10DQ9UBN6 386 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 GPR160Q9UJ42 338 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 ZNF780BQ9Y6R6 833 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 GMFGO60234 142 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 CPT2P23786 658 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 GLUD2P49448 558 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 USP11P51784 963 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 CDKL1Q00532 357 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 PLP2Q04941 152 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 RNASE10Q5GAN6 216 aaKnown RBP5.48□□□□□ -1.53
USF3-202ENST00000478658 SLC16A9Q7RTY1 509 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 SLC13A5Q86YT5 568 aaPredicted RBP5.48□□□□□ -1.53
USF3-202ENST00000478658 KATNAL2Q8IYT4 538 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 MFSD8Q8NHS3 518 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 UBASH3BQ8TF42 649 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 TRIM43Q96BQ3 446 aaPredicted RBP5.48□□□□□ -1.53
USF3-202ENST00000478658 LIN37Q96GY3 246 aaPredicted RBP5.48□□□□□ -1.53
USF3-202ENST00000478658 OR5B12Q96R08 314 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 IL1RL2Q9HB29 575 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 TMEM9Q9P0T7 183 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 SSR3Q9UNL2 185 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 ALG5Q9Y673 324 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 C20orf202A1L168 122 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 A8MXE2 369 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 E7ESA3 106 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 FKBP6O75344 327 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 ZMPSTE24O75844 475 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 TPBGLP0DKB5 382 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 CEBPGP53567 150 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 RAB15P59190 212 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 FOXK1P85037 733 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 MFSD14BQ5SR56 506 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 TMEM110Q86TL2 294 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 C12orf40Q86WS4 652 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 ZNF808Q8N4W9 903 aaPredicted RBP5.48□□□□□ -1.53
USF3-202ENST00000478658 LRRC57Q8N9N7 239 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 SCGB1C1Q8TD33 95 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 TCTEX1D2Q8WW35 142 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 CNOT6LQ96LI5 555 aaKnown RBP5.48□□□□□ -1.53
USF3-202ENST00000478658 VRK1Q99986 396 aaPredicted RBP5.48□□□□□ -1.53
USF3-202ENST00000478658 FBXO44Q9H4M3 255 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 UBE2TQ9NPD8 197 aaPredicted RBP5.48□□□□□ -1.53
USF3-202ENST00000478658 ACOXLQ9NUZ1 547 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 FBXO10Q9UK96 956 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 MAGED2Q9UNF1 606 aaPredicted RBP5.48□□□□□ -1.53
USF3-202ENST00000478658 CNTN6Q9UQ52 1028 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 TTLL13PA6NNM8 815 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 LIN7AO14910 233 aaPredicted RBP5.48□□□□□ -1.53
USF3-202ENST00000478658 ALDOAP04075 364 aaKnown RBP5.48□□□□□ -1.53
USF3-202ENST00000478658 THRBP10828 461 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 KCNC1P48547 511 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 SMAGPQ0VAQ4 97 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 PWP1Q13610 501 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 GIT2Q14161 759 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 MPPE1Q53F39 396 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 LYRM7Q5U5X0 104 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 SERPINA13PQ6UXR4 307 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 RNF135Q8IUD6 432 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 MCATQ8IVS2 390 aaKnown RBP5.48□□□□□ -1.53
USF3-202ENST00000478658 CMTR1Q8N1G2 835 aaKnown RBP5.48□□□□□ -1.53
USF3-202ENST00000478658 ZNF615Q8N8J6 731 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 PLBD2Q8NHP8 589 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 MSI2Q96DH6 328 aaKnown RBP5.48□□□□□ -1.53
USF3-202ENST00000478658 MMP19Q99542 508 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 TLR8Q9NR97 1041 aaKnown RBP5.48□□□□□ -1.53
USF3-202ENST00000478658 FAM20BO75063 409 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 GNSP15586 552 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 KCNA3P22001 575 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 PLIN5Q00G26 463 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 ZNF268Q14587 947 aaPredicted RBP5.48□□□□□ -1.53
USF3-202ENST00000478658 MGAT5BQ3V5L5 792 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 EIPR1Q53HC9 387 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 ANXA8L1Q5VT79 327 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 EGFL6Q8IUX8 553 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 FBXW8Q8N3Y1 598 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 SLC5A11Q8WWX8 675 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 BORCS8Q96FH0 119 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 HIC2Q96JB3 615 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 SLF1Q9BQI6 1058 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 ROPN1BQ9BZX4 212 aaPredicted RBP5.48□□□□□ -1.53
USF3-202ENST00000478658 ABCG4Q9H172 646 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 ROPN1Q9HAT0 212 aaPredicted RBP5.48□□□□□ -1.53
USF3-202ENST00000478658 CDH16O75309 829 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 FTCDO95954 541 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 RAB27AP51159 221 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 PPP2R2AP63151 447 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 RIPK1Q13546 671 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 CDO1Q16878 200 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 C8orf37Q96NL8 207 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 RXFP1Q9HBX9 757 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 GNG13Q9P2W3 67 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 NXF1Q9UBU9 619 aaKnown RBP5.48□□□□□ -1.53
USF3-202ENST00000478658 UGGT2Q9NYU1 1516 aa5.48□□□□□ -1.53
USF3-202ENST00000478658 A0A075B6Q4 140 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 IPO13O94829 963 aaKnown RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 CDH5P33151 784 aaPredicted RBP5.47□□□□□ -1.53
USF3-202ENST00000478658 VHLP40337 213 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 PNLIPRP1P54315 467 aa5.47□□□□□ -1.53
USF3-202ENST00000478658 SLC26A5P58743 744 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms