RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 SIGLEC16A6NMB1 481 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 MDM4O15151 490 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 PPFIA2O75334 1257 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 KLKB1P03952 638 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 HMBSP08397 361 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 FLT3P36888 993 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 RIPPLY3P57055 190 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 FOXK1P85037 733 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 NME3Q13232 169 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 IFI16Q16666 785 aaKnown RBP14.85□□□□□ -0.03
USP11-207ENST00000478596 FNDC3BQ53EP0 1204 aaKnown RBP14.85□□□□□ -0.03
USP11-207ENST00000478596 C3orf38Q5JPI3 329 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 PLEKHA7Q6IQ23 1121 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 USP53Q70EK8 1073 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 BHLHA9Q7RTU4 235 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 SLC25A45Q8N413 288 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 ZNF366Q8N895 744 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 MFSD2AQ8NA29 543 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 OR4C6Q8NH72 309 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 RXFP2Q8WXD0 754 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 SERAC1Q96JX3 654 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 CFAP57Q96MR6 1250 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 SERPINB11Q96P15 392 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 RSPH9Q9H1X1 276 aaPredicted RBP14.85□□□□□ -0.03
USP11-207ENST00000478596 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.85□□□□□ -0.03
USP11-207ENST00000478596 DDIT4Q9NX09 232 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 OSER1Q9NX31 292 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 RRN3Q9NYV6 651 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 MARCH2Q9P0N8 246 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 GUCA1BQ9UMX6 200 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 PPP2R2CQ9Y2T4 447 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 REXO2Q9Y3B8 237 aaKnown RBP14.85□□□□□ -0.03
USP11-207ENST00000478596 SLC12A8A0AV02 714 aa14.84□□□□□ -0.03
USP11-207ENST00000478596 MYO1FO00160 1098 aa14.84□□□□□ -0.03
USP11-207ENST00000478596 MSI1O43347 362 aaKnown RBP14.84□□□□□ -0.03
USP11-207ENST00000478596 BUB1O43683 1085 aa14.84□□□□□ -0.03
USP11-207ENST00000478596 RNF8O76064 485 aa14.84□□□□□ -0.03
USP11-207ENST00000478596 NOS2P35228 1153 aa14.84□□□□□ -0.03
USP11-207ENST00000478596 RFC1P35251 1148 aaPredicted RBP14.84□□□□□ -0.03
USP11-207ENST00000478596 GJC1P36383 396 aa14.84□□□□□ -0.03
USP11-207ENST00000478596 DUSP3P51452 185 aaPredicted RBP14.84□□□□□ -0.03
USP11-207ENST00000478596 RPL7AP62424 266 aaKnown RBP14.84□□□□□ -0.03
USP11-207ENST00000478596 DEUP1Q05D60 604 aa14.84□□□□□ -0.03
USP11-207ENST00000478596 SFSWAPQ12872 951 aaKnown RBP14.84□□□□□ -0.03
USP11-207ENST00000478596 MESDQ14696 234 aa14.84□□□□□ -0.03
USP11-207ENST00000478596 TAC4Q86UU9 113 aa14.84□□□□□ -0.03
USP11-207ENST00000478596 IQCHQ86VS3 1027 aa14.84□□□□□ -0.03
USP11-207ENST00000478596 SLC35G2Q8TBE7 412 aa14.84□□□□□ -0.03
USP11-207ENST00000478596 DQX1Q8TE96 717 aaKnown RBP14.84□□□□□ -0.03
USP11-207ENST00000478596 SLC2A13Q96QE2 648 aa14.84□□□□□ -0.03
USP11-207ENST00000478596 SLC25A18Q9H1K4 315 aa14.84□□□□□ -0.03
USP11-207ENST00000478596 FBXL12Q9NXK8 326 aa14.84□□□□□ -0.03
USP11-207ENST00000478596 IP6K2Q9UHH9 426 aa14.84□□□□□ -0.03
USP11-207ENST00000478596 LCMT1Q9UIC8 334 aa14.84□□□□□ -0.03
USP11-207ENST00000478596 PYCARDQ9ULZ3 195 aa14.84□□□□□ -0.03
USP11-207ENST00000478596 SRPK3Q9UPE1 567 aa14.84□□□□□ -0.03
USP11-207ENST00000478596 BLACEA4D250 179 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 M0QYT0 321 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 SDC3O75056 442 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 APOEP02649 317 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 CYBBP04839 570 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 OVGP1Q12889 678 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 C15orf59Q2T9L4 293 aaPredicted RBP14.83□□□□□ -0.04
USP11-207ENST00000478596 HS1BP3Q53T59 392 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 ZFYVE27Q5T4F4 411 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 SYPL2Q5VXT5 272 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 CPXM2Q8N436 756 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 ARL14Q8N4G2 192 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 GANCQ8TET4 914 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 FAM172AQ8WUF8 416 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 CYB5D2Q8WUJ1 264 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 LIN37Q96GY3 246 aaPredicted RBP14.83□□□□□ -0.04
USP11-207ENST00000478596 BTBD6Q96KE9 485 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 ALS2CR12Q96Q35 445 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 TBCBQ99426 244 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 CNPY3Q9BT09 278 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 ABCG4Q9H172 646 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 TRMT1Q9NXH9 659 aaKnown RBP14.83□□□□□ -0.04
USP11-207ENST00000478596 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.83□□□□□ -0.04
USP11-207ENST00000478596 TRIM10Q9UDY6 481 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 SERGEFQ9UGK8 458 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 SFMBT1Q9UHJ3 866 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 TMEM59LQ9UK28 342 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 FZD4Q9ULV1 537 aa14.83□□□□□ -0.04
USP11-207ENST00000478596 A0A0A6YYK5 440 aaPredicted RBP14.82□□□□□ -0.04
USP11-207ENST00000478596 C2CD4BA6NLJ0 364 aa14.82□□□□□ -0.04
USP11-207ENST00000478596 SPOPO43791 374 aa14.82□□□□□ -0.04
USP11-207ENST00000478596 MAGEC1O60732 1142 aa14.82□□□□□ -0.04
USP11-207ENST00000478596 TRUB2O95900 331 aaKnown RBP14.82□□□□□ -0.04
USP11-207ENST00000478596 MOCS2O96007 188 aaPredicted RBP14.82□□□□□ -0.04
USP11-207ENST00000478596 HARS2P49590 506 aaKnown RBP14.82□□□□□ -0.04
USP11-207ENST00000478596 ZNF143P52747 638 aaPredicted RBP14.82□□□□□ -0.04
USP11-207ENST00000478596 TBX4P57082 545 aa14.82□□□□□ -0.04
USP11-207ENST00000478596 SLC25A52Q3SY17 297 aa14.82□□□□□ -0.04
USP11-207ENST00000478596 NAPEPLDQ6IQ20 393 aa14.82□□□□□ -0.04
USP11-207ENST00000478596 MSANTD2Q6P1R3 559 aa14.82□□□□□ -0.04
USP11-207ENST00000478596 SCYL2Q6P3W7 929 aa14.82□□□□□ -0.04
USP11-207ENST00000478596 BEND5Q7L4P6 421 aa14.82□□□□□ -0.04
USP11-207ENST00000478596 DAAM2Q86T65 1068 aa14.82□□□□□ -0.04
USP11-207ENST00000478596 ZNF276Q8N554 614 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms