RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 DLG2Q15700 870 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 ZNF423Q2M1K9 1284 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 FILIP1LQ4L180 1135 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 KIAA0895LQ68EN5 471 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 SPECC1LQ69YQ0 1117 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 SDE2Q6IQ49 451 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 ARMCX6Q7L4S7 300 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 SLFN11Q7Z7L1 901 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 TRIM69Q86WT6 500 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 TMEM151AQ8N4L1 468 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 DEFB119Q8N690 84 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 TMIEQ8NEW7 156 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 TEKT4Q8WW24 435 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 BIRC7Q96CA5 298 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 HMCESQ96FZ2 354 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 BTBD6Q96KE9 485 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 CHP1Q99653 195 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 EDEM2Q9BV94 578 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 SIK2Q9H0K1 926 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 ETNK2Q9NVF9 386 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 BCCIPQ9P287 314 aaKnown RBP eCLIP4.32□□□□□ -1.72
POLR2B-208ENST00000478188 PAXBP1Q9Y5B6 917 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.32□□□□□ -1.72
POLR2B-208ENST00000478188 TMCO5BA8MYB1 307 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 EIF3CLB5ME19 914 aaKnown RBP4.32□□□□□ -1.72
POLR2B-208ENST00000478188 MUSKO15146 869 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 SEMA4FO95754 770 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 GSRP00390 522 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 CAPNS1P04632 268 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 PMLP29590 882 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 MAN1A1P33908 653 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 EIF4A3P38919 411 aaKnown RBP4.32□□□□□ -1.72
POLR2B-208ENST00000478188 DPP6P42658 865 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 CTSKP43235 329 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 RGRP47804 291 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 CREB5Q02930 508 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 CNTN1Q12860 1018 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 GRIK2Q13002 908 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 ZNF177Q13360 481 aaPredicted RBP4.32□□□□□ -1.72
POLR2B-208ENST00000478188 SLC18A3Q16572 532 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 TAZQ16635 292 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 DUOXA1Q1HG43 343 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 OXLD1Q5BKU9 147 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 LINGO4Q6UY18 593 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 ARHGAP36Q6ZRI8 547 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 POLNQ7Z5Q5 900 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 ZSWIM9Q86XI8 627 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 TMEM145Q8NBT3 493 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 ZNF653Q96CK0 615 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 EIF3CQ99613 913 aaKnown RBP4.32□□□□□ -1.72
POLR2B-208ENST00000478188 GPR174Q9BXC1 333 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 HDAC8Q9BY41 377 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 MAGEH1Q9H213 219 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 TM9SF3Q9HD45 589 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 CWC15Q9P013 229 aaKnown RBP4.32□□□□□ -1.72
POLR2B-208ENST00000478188 RAB23Q9ULC3 237 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 USP18Q9UMW8 372 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 AP4E1Q9UPM8 1137 aa4.32□□□□□ -1.72
POLR2B-208ENST00000478188 REXO2Q9Y3B8 237 aaKnown RBP4.32□□□□□ -1.72
POLR2B-208ENST00000478188 BZW2Q9Y6E2 419 aaKnown RBP4.32□□□□□ -1.72
POLR2B-208ENST00000478188 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.31□□□□□ -1.72
POLR2B-208ENST00000478188 A0A1W2PP55 124 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 TYW5A2RUC4 315 aaKnown RBP4.31□□□□□ -1.72
POLR2B-208ENST00000478188 CDC14CA4D256 554 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 SLC35F4A4IF30 521 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 FGF10O15520 208 aaPredicted RBP4.31□□□□□ -1.72
POLR2B-208ENST00000478188 PRAMEF11O60813 436 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 CCDC172P0C7W6 258 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 ZNF883P0CG24 379 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 CR2P20023 1033 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 SLC8A1P32418 973 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 PSMD8P48556 350 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 DHPSP49366 369 aaPredicted RBP4.31□□□□□ -1.72
POLR2B-208ENST00000478188 HADHBP55084 474 aaKnown RBP4.31□□□□□ -1.72
POLR2B-208ENST00000478188 TAS2R40P59535 323 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 GFPT1Q06210 699 aaPredicted RBP4.31□□□□□ -1.72
POLR2B-208ENST00000478188 TRIM14Q14142 442 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 ZNF284Q2VY69 593 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 ALG1LQ6GMV1 187 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 NCEH1Q6PIU2 408 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 DPY19L3Q6ZPD9 716 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 RFX8Q6ZV50 586 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 SND1Q7KZF4 910 aaKnown RBP eCLIP4.31□□□□□ -1.72
POLR2B-208ENST00000478188 PARS2Q7L3T8 475 aaKnown RBP4.31□□□□□ -1.72
POLR2B-208ENST00000478188 SPATS2Q86XZ4 545 aaKnown RBP4.31□□□□□ -1.72
POLR2B-208ENST00000478188 CACUL1Q86Y37 369 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 MMAAQ8IVH4 418 aaKnown RBP4.31□□□□□ -1.72
POLR2B-208ENST00000478188 PGBD5Q8N414 524 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 PCDH20Q8N6Y1 951 aaKnown RBP4.31□□□□□ -1.72
POLR2B-208ENST00000478188 OR2I1PQ8NGU4 316 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 OR2T34Q8NGX1 318 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 PIP4K2CQ8TBX8 421 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 FUBP1Q96AE4 644 aaKnown RBP4.31□□□□□ -1.72
POLR2B-208ENST00000478188 ECHDC3Q96DC8 303 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 TRIM11Q96F44 468 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 SLC39A8Q9C0K1 460 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 PDCL3Q9H2J4 239 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 CAAP1Q9H8G2 361 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 IL21RQ9HBE5 538 aa4.31□□□□□ -1.72
POLR2B-208ENST00000478188 PCDH18Q9HCL0 1135 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms