RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 PACSIN1Q9BY11 444 aa10.4□□□□□ -0.74
LCLAT1-209ENST00000478015 SLC39A8Q9C0K1 460 aa10.4□□□□□ -0.74
LCLAT1-209ENST00000478015 ZDHHC6Q9H6R6 413 aa10.4□□□□□ -0.74
LCLAT1-209ENST00000478015 PDFQ9HBH1 243 aa10.4□□□□□ -0.74
LCLAT1-209ENST00000478015 CWC15Q9P013 229 aaKnown RBP10.4□□□□□ -0.74
LCLAT1-209ENST00000478015 AP4E1Q9UPM8 1137 aa10.4□□□□□ -0.74
LCLAT1-209ENST00000478015 A0A1W2PQJ5 194 aa10.4□□□□□ -0.75
LCLAT1-209ENST00000478015 WASH4PA8MWX3 477 aa10.4□□□□□ -0.75
LCLAT1-209ENST00000478015 MUSKO15146 869 aa10.4□□□□□ -0.75
LCLAT1-209ENST00000478015 RNGTTO60942 597 aaKnown RBP10.4□□□□□ -0.75
LCLAT1-209ENST00000478015 ZNF883P0CG24 379 aa10.4□□□□□ -0.75
LCLAT1-209ENST00000478015 ADRB3P13945 408 aa10.4□□□□□ -0.75
LCLAT1-209ENST00000478015 NXPH1P58417 271 aa10.4□□□□□ -0.75
LCLAT1-209ENST00000478015 FAM46CQ5VWP2 391 aa10.4□□□□□ -0.75
LCLAT1-209ENST00000478015 NYAP1Q6ZVC0 841 aa10.4□□□□□ -0.75
LCLAT1-209ENST00000478015 ERN2Q76MJ5 926 aaKnown RBP10.4□□□□□ -0.75
LCLAT1-209ENST00000478015 DSG4Q86SJ6 1040 aa10.4□□□□□ -0.75
LCLAT1-209ENST00000478015 ZSWIM9Q86XI8 627 aa10.4□□□□□ -0.75
LCLAT1-209ENST00000478015 RNF214Q8ND24 703 aa10.4□□□□□ -0.75
LCLAT1-209ENST00000478015 HEPHQ9BQS7 1158 aa10.4□□□□□ -0.75
LCLAT1-209ENST00000478015 HDAC8Q9BY41 377 aa10.4□□□□□ -0.75
LCLAT1-209ENST00000478015 EDEM3Q9BZQ6 932 aa10.4□□□□□ -0.75
LCLAT1-209ENST00000478015 CEP44Q9C0F1 390 aa10.4□□□□□ -0.75
LCLAT1-209ENST00000478015 DHX35Q9H5Z1 703 aaKnown RBP10.4□□□□□ -0.75
LCLAT1-209ENST00000478015 LHX3Q9UBR4 397 aa10.4□□□□□ -0.75
LCLAT1-209ENST00000478015 PNMA8BQ9ULN7 279 aaPredicted RBP10.4□□□□□ -0.75
LCLAT1-209ENST00000478015 A0A1B0GTQ1 180 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 TTC24A2A3L6 582 aaPredicted RBP10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 POM121BA6NF01 834 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 C1QTNF3-AMACRE9PGA6 284 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 TLR4O00206 839 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 KRIT1O00522 736 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 SLC7A4O43246 635 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 BUB1O43683 1085 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 BUB1BO60566 1050 aaPredicted RBP10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 KRT37O76014 449 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 CER1O95813 267 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 UGT2B4P06133 528 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 CCDC172P0C7W6 258 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 FTH1P19P0C7X4 201 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 ZBED6P86452 979 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 SEMG2Q02383 582 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 SLC20A2Q08357 652 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 ASTE1Q2TB18 679 aaPredicted RBP10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 ATP13A4Q4VNC1 1196 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 ERMARDQ5T6L9 678 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 AFMIDQ63HM1 303 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 LRSAM1Q6UWE0 723 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 KANSL1Q7Z3B3 1105 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 PCDH20Q8N6Y1 951 aaKnown RBP10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 OR2AP1Q8NGE2 309 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 SAP25Q8TEE9 199 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 FNIP1Q8TF40 1166 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 GATA6Q92908 595 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 ISG20Q96AZ6 181 aaKnown RBP10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 BMFQ96LC9 184 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 ELF4Q99607 663 aaPredicted RBP10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 KLF6Q99612 283 aaPredicted RBP10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 SLC32A1Q9H598 525 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 FADS3Q9Y5Q0 445 aa10.39□□□□□ -0.75
LCLAT1-209ENST00000478015 RP1P56715 2156 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 C16orf96A6NNT2 1141 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 SDC3O75056 442 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 DKK1O94907 266 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 PAK4O96013 591 aaPredicted RBP10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 PRNPP04156 253 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 CD48P09326 243 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 ERCC2P18074 760 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 IL4RP24394 825 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 ITGB7P26010 798 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 PAPOLAP51003 745 aaKnown RBP10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 DPYSQ14117 519 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 MYLK3Q32MK0 819 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 TDRD12Q587J7 1177 aaKnown RBP10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 PPP6R3Q5H9R7 873 aaPredicted RBP10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 NAPEPLDQ6IQ20 393 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 GCNT7Q6ZNI0 430 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 RFX8Q6ZV50 586 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 RAB44Q7Z6P3 723 aaPredicted RBP10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 ADAT2Q7Z6V5 191 aaKnown RBP10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 HORMAD1Q86X24 394 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 TSEN2Q8NCE0 465 aaKnown RBP10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 OR13H1Q8NG92 308 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 RHBDD1Q8TEB9 315 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 SYN2Q92777 582 aaPredicted RBP10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 KLHL32Q96NJ5 620 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 KDM4CQ9H3R0 1056 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 TMEM51Q9NW97 253 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 KLF15Q9UIH9 416 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 ATMQ13315 3056 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 IGSF10Q6WRI0 2623 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 IGLON5A6NGN9 336 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 AREL1O15033 823 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 PCDHGA12O60330 932 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 PCDH8O95206 1070 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 PIGNO95427 931 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 PEX11BO96011 259 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 CAPNS1P04632 268 aa10.38□□□□□ -0.75
LCLAT1-209ENST00000478015 SERPING1P05155 500 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms