RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-210ENST00000477625 NEK3P51956 506 aa12.44□□□□□ -0.42
PTPN7-210ENST00000477625 FAM193AP78312 1265 aa12.44□□□□□ -0.42
PTPN7-210ENST00000477625 STAT4Q14765 748 aa12.44□□□□□ -0.42
PTPN7-210ENST00000477625 TRIP6Q15654 476 aaKnown RBP12.44□□□□□ -0.42
PTPN7-210ENST00000477625 BOLA3Q53S33 107 aa12.44□□□□□ -0.42
PTPN7-210ENST00000477625 ZNF805Q5CZA5 627 aa12.44□□□□□ -0.42
PTPN7-210ENST00000477625 PPP6R3Q5H9R7 873 aaPredicted RBP12.44□□□□□ -0.42
PTPN7-210ENST00000477625 CCDC122Q5T0U0 273 aa12.44□□□□□ -0.42
PTPN7-210ENST00000477625 IQCHQ86VS3 1027 aa12.44□□□□□ -0.42
PTPN7-210ENST00000477625 HORMAD1Q86X24 394 aa12.44□□□□□ -0.42
PTPN7-210ENST00000477625 RNF214Q8ND24 703 aa12.44□□□□□ -0.42
PTPN7-210ENST00000477625 OR8K1Q8NGG5 319 aa12.44□□□□□ -0.42
PTPN7-210ENST00000477625 OR6K2Q8NGY2 324 aa12.44□□□□□ -0.42
PTPN7-210ENST00000477625 VOPP1Q96AW1 172 aa12.44□□□□□ -0.42
PTPN7-210ENST00000477625 ELF4Q99607 663 aaPredicted RBP12.44□□□□□ -0.42
PTPN7-210ENST00000477625 CWC15Q9P013 229 aaKnown RBP12.44□□□□□ -0.42
PTPN7-210ENST00000477625 IP6K2Q9UHH9 426 aa12.44□□□□□ -0.42
PTPN7-210ENST00000477625 PCOLCE2Q9UKZ9 415 aa12.44□□□□□ -0.42
PTPN7-210ENST00000477625 C16orf96A6NNT2 1141 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 SLC31A1O15431 190 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 FLRT2O43155 660 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 PCDHGA12O60330 932 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 ERCC2P18074 760 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 IL1R2P27930 398 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 EIF4A3P38919 411 aaKnown RBP12.43□□□□□ -0.42
PTPN7-210ENST00000477625 PAPOLAP51003 745 aaKnown RBP12.43□□□□□ -0.42
PTPN7-210ENST00000477625 RHOAP61586 193 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 RAD51Q06609 339 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 OVGP1Q12889 678 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 FOXC1Q12948 553 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 TRIM14Q14142 442 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 CYTH1Q15438 398 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 ZNF284Q2VY69 593 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 ATXN7L2Q5T6C5 722 aaPredicted RBP12.43□□□□□ -0.42
PTPN7-210ENST00000477625 AFMIDQ63HM1 303 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 VSTM4Q8IW00 320 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 NIPA2Q8N8Q9 360 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 CELF6Q96J87 481 aaKnown RBP12.43□□□□□ -0.42
PTPN7-210ENST00000477625 GDAP1L1Q96MZ0 367 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 DNAJC7Q99615 494 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 NUP85Q9BW27 656 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 OSBPL1AQ9BXW6 950 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 SLC39A8Q9C0K1 460 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 ZWILCHQ9H900 591 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 GDF3Q9NR23 364 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 ANAPC7Q9UJX3 599 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 NENFQ9UMX5 172 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 MFHAS1Q9Y4C4 1052 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 FADS3Q9Y5Q0 445 aa12.43□□□□□ -0.42
PTPN7-210ENST00000477625 PLXNA2O75051 1894 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 A0A1B0GTQ1 180 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 ARHGAP42A6NI28 874 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 J3KR12 359 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 MYO1FO00160 1098 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 AP1G1O43747 822 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 MAGEC1O60732 1142 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 PRAMEF11O60813 436 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 IGSF6O95976 241 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 UGT2B4P06133 528 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 TCF4P15884 667 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 CCT8P50990 548 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 NXPH1P58417 271 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 RPS21P63220 83 aaKnown RBP12.42□□□□□ -0.42
PTPN7-210ENST00000477625 DPYSQ14117 519 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 DPYSL2Q16555 572 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 SLC18A3Q16572 532 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 TSR1Q2NL82 804 aaKnown RBP12.42□□□□□ -0.42
PTPN7-210ENST00000477625 TMEM259Q4ZIN3 620 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 PRAMEF14Q5SWL7 426 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 SEL1L3Q68CR1 1132 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 KIAA1161Q6NSJ0 714 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 GDPD4Q6W3E5 623 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 PARS2Q7L3T8 475 aaKnown RBP12.42□□□□□ -0.42
PTPN7-210ENST00000477625 GLRX5Q86SX6 157 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 TMEM145Q8NBT3 493 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 NETO2Q8NC67 525 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 RHBDD1Q8TEB9 315 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 KLK6Q92876 244 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 RAB7BQ96AH8 199 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 ARHGEF26Q96DR7 871 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 FEM1CQ96JP0 617 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 BTBD6Q96KE9 485 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 KLHL32Q96NJ5 620 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 CNTNAP3BQ96NU0 1288 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 CNTNAP3Q9BZ76 1288 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 CPEB1Q9BZB8 566 aaKnown RBP12.42□□□□□ -0.42
PTPN7-210ENST00000477625 ERVMER34-1Q9H9K5 563 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 PDFQ9HBH1 243 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 ZNHIT6Q9NWK9 470 aaKnown RBP12.42□□□□□ -0.42
PTPN7-210ENST00000477625 UBA2Q9UBT2 640 aaPredicted RBP12.42□□□□□ -0.42
PTPN7-210ENST00000477625 ZFR2Q9UPR6 939 aaKnown RBP12.42□□□□□ -0.42
PTPN7-210ENST00000477625 WASF3Q9UPY6 502 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 CABIN1Q9Y6J0 2220 aa12.42□□□□□ -0.42
PTPN7-210ENST00000477625 SSU72P8A0A1W2PR75 194 aa12.41□□□□□ -0.42
PTPN7-210ENST00000477625 H3BRJ5 948 aa12.41□□□□□ -0.42
PTPN7-210ENST00000477625 TSPAN6O43657 245 aa12.41□□□□□ -0.42
PTPN7-210ENST00000477625 TRIM16O95361 564 aa12.41□□□□□ -0.42
PTPN7-210ENST00000477625 TPM1P09493 284 aa12.41□□□□□ -0.42
PTPN7-210ENST00000477625 RARAP10276 462 aa12.41□□□□□ -0.42
PTPN7-210ENST00000477625 PRLRP16471 622 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms