RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 ISG20Q96AZ6 181 aaKnown RBP15.56■□□□□ 0.08
SEC13-215ENST00000477547 PSKH2Q96QS6 385 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 FERMT1Q9BQL6 677 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 C10orf88Q9H8K7 445 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 NT5MQ9NPB1 228 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 HAUS2Q9NVX0 235 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 POLR3BQ9NW08 1133 aaPredicted RBP15.56■□□□□ 0.08
SEC13-215ENST00000477547 SUN2Q9UH99 717 aa15.56■□□□□ 0.08
SEC13-215ENST00000477547 TPRP12270 2363 aaKnown RBP15.55■□□□□ 0.08
SEC13-215ENST00000477547 A0A1W2PQF6 199 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 TCRBV21S2A2A0A5A6 115 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 BCLAF3A2AJT9 711 aaKnown RBP15.55■□□□□ 0.08
SEC13-215ENST00000477547 CFAP69A5D8W1 941 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 KRIT1O00522 736 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 MUSKO15146 869 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 KCNN4O15554 427 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 ZNF821O75541 412 aaPredicted RBP15.55■□□□□ 0.08
SEC13-215ENST00000477547 URI1O94763 535 aaPredicted RBP15.55■□□□□ 0.08
SEC13-215ENST00000477547 STK10O94804 968 aaKnown RBP15.55■□□□□ 0.08
SEC13-215ENST00000477547 PTPN3P26045 913 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 PAFAH1B1P43034 410 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 RGRP47804 291 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 CCNHP51946 323 aaPredicted RBP15.55■□□□□ 0.08
SEC13-215ENST00000477547 SNRPD1P62314 119 aaKnown RBP15.55■□□□□ 0.08
SEC13-215ENST00000477547 CAMK2GQ13555 558 aaPredicted RBP15.55■□□□□ 0.08
SEC13-215ENST00000477547 BYSLQ13895 437 aaKnown RBP15.55■□□□□ 0.08
SEC13-215ENST00000477547 ELAVL3Q14576 367 aaKnown RBP15.55■□□□□ 0.08
SEC13-215ENST00000477547 CRY1Q16526 586 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 CCNG2Q16589 344 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 CACUL1Q86Y37 369 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 RYBPQ8N488 228 aaPredicted RBP15.55■□□□□ 0.08
SEC13-215ENST00000477547 TEX26Q8N6G2 289 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 OR6K2Q8NGY2 324 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 GRIN3AQ8TCU5 1115 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 OR8D1Q8WZ84 308 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 HHIPQ96QV1 700 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 IL12RB2Q99665 862 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 MGME1Q9BQP7 344 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 SEMA4AQ9H3S1 761 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 PRSS16Q9NQE7 514 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 HOMER3Q9NSC5 361 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 RBM22Q9NW64 420 aaKnown RBP eCLIP15.55■□□□□ 0.083e-10■□□□□ 11.1
SEC13-215ENST00000477547 SPATA6Q9NWH7 488 aaPredicted RBP15.55■□□□□ 0.08
SEC13-215ENST00000477547 C2orf42Q9NWW7 574 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 DLL3Q9NYJ7 618 aa15.55■□□□□ 0.08
SEC13-215ENST00000477547 KLHL8Q9P2G9 620 aaPredicted RBP15.55■□□□□ 0.08
SEC13-215ENST00000477547 TARSL2A2RTX5 802 aaKnown RBP15.54■□□□□ 0.08
SEC13-215ENST00000477547 ZNF500O60304 480 aaPredicted RBP15.54■□□□□ 0.08
SEC13-215ENST00000477547 PHF2O75151 1096 aa15.54■□□□□ 0.08
SEC13-215ENST00000477547 JCHAINP01591 159 aa15.54■□□□□ 0.08
SEC13-215ENST00000477547 CCR3P51677 355 aa15.54■□□□□ 0.08
SEC13-215ENST00000477547 DGKEP52429 567 aa15.54■□□□□ 0.08
SEC13-215ENST00000477547 MAXP61244 160 aa15.54■□□□□ 0.08
SEC13-215ENST00000477547 SATB1Q01826 763 aa15.54■□□□□ 0.08
SEC13-215ENST00000477547 WASHC5Q12768 1159 aa15.54■□□□□ 0.08
SEC13-215ENST00000477547 OASLQ15646 514 aaKnown RBP15.54■□□□□ 0.08
SEC13-215ENST00000477547 OTOGLQ3ZCN5 2332 aa15.54■□□□□ 0.08
SEC13-215ENST00000477547 CARD16Q5EG05 197 aa15.54■□□□□ 0.08
SEC13-215ENST00000477547 C9orf64Q5T6V5 341 aa15.54■□□□□ 0.08
SEC13-215ENST00000477547 TMEM92Q6UXU6 159 aa15.54■□□□□ 0.08
SEC13-215ENST00000477547 DPY19L3Q6ZPD9 716 aa15.54■□□□□ 0.08
SEC13-215ENST00000477547 STK40Q8N2I9 435 aa15.54■□□□□ 0.08
SEC13-215ENST00000477547 PGBD5Q8N414 524 aa15.54■□□□□ 0.08
SEC13-215ENST00000477547 C12orf50Q8NA57 414 aaPredicted RBP15.54■□□□□ 0.08
SEC13-215ENST00000477547 TSTD1Q8NFU3 115 aa15.54■□□□□ 0.08
SEC13-215ENST00000477547 OR2A12Q8NGT7 310 aa15.54■□□□□ 0.08
SEC13-215ENST00000477547 TMEM121Q9BTD3 319 aa15.54■□□□□ 0.08
SEC13-215ENST00000477547 POLR1EQ9GZS1 481 aaKnown RBP15.54■□□□□ 0.08
SEC13-215ENST00000477547 ZDHHC6Q9H6R6 413 aa15.54■□□□□ 0.08
SEC13-215ENST00000477547 FBRSQ9HAH7 460 aa15.54■□□□□ 0.08
SEC13-215ENST00000477547 POLMQ9NP87 494 aaPredicted RBP15.54■□□□□ 0.08
SEC13-215ENST00000477547 RNF14Q9UBS8 474 aa15.54■□□□□ 0.08
SEC13-215ENST00000477547 AMACRQ9UHK6 382 aa15.54■□□□□ 0.08
SEC13-215ENST00000477547 ZNF148Q9UQR1 794 aa15.54■□□□□ 0.08
SEC13-215ENST00000477547 FARP1Q9Y4F1 1045 aaPredicted RBP15.54■□□□□ 0.08
SEC13-215ENST00000477547 MYLKQ15746 1914 aa15.53■□□□□ 0.08
SEC13-215ENST00000477547 PDE2AO00408 941 aaPredicted RBP15.53■□□□□ 0.08
SEC13-215ENST00000477547 ALOX15BO15296 676 aa15.53■□□□□ 0.08
SEC13-215ENST00000477547 PSMD8P48556 350 aa15.53■□□□□ 0.08
SEC13-215ENST00000477547 NRLP54845 237 aa15.53■□□□□ 0.08
SEC13-215ENST00000477547 GDF10P55107 478 aa15.53■□□□□ 0.08
SEC13-215ENST00000477547 CKAP4Q07065 602 aaKnown RBP15.53■□□□□ 0.08
SEC13-215ENST00000477547 ITKQ08881 620 aa15.53■□□□□ 0.08
SEC13-215ENST00000477547 CYP1B1Q16678 543 aa15.53■□□□□ 0.08
SEC13-215ENST00000477547 RSPO4Q2I0M5 234 aaPredicted RBP15.53■□□□□ 0.08
SEC13-215ENST00000477547 FAM182AQ5T1J6 154 aa15.53■□□□□ 0.08
SEC13-215ENST00000477547 DRICH1Q6PGQ1 229 aaPredicted RBP15.53■□□□□ 0.08
SEC13-215ENST00000477547 DSG4Q86SJ6 1040 aa15.53■□□□□ 0.08
SEC13-215ENST00000477547 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.53■□□□□ 0.08
SEC13-215ENST00000477547 FAM71DQ8N9W8 422 aa15.53■□□□□ 0.08
SEC13-215ENST00000477547 CHST14Q8NCH0 376 aa15.53■□□□□ 0.08
SEC13-215ENST00000477547 OR2T3Q8NH03 318 aa15.53■□□□□ 0.08
SEC13-215ENST00000477547 AGAP3Q96P47 875 aa15.53■□□□□ 0.08
SEC13-215ENST00000477547 VAT1Q99536 393 aa15.53■□□□□ 0.08
SEC13-215ENST00000477547 CD248Q9HCU0 757 aa15.53■□□□□ 0.08
SEC13-215ENST00000477547 HECAQ9UBI9 543 aaPredicted RBP15.53■□□□□ 0.08
SEC13-215ENST00000477547 EVLQ9UI08 416 aaPredicted RBP15.53■□□□□ 0.08
SEC13-215ENST00000477547 CDC23Q9UJX2 597 aa15.53■□□□□ 0.08
SEC13-215ENST00000477547 GJB3O75712 270 aa15.52■□□□□ 0.08
SEC13-215ENST00000477547 ITGAVP06756 1048 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms