RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 PPP1R10Q96QC0 940 aaKnown RBP4.46□□□□□ -1.7
UBR3-209ENST00000477461 ZNF304Q9HCX3 659 aa4.46□□□□□ -1.7
UBR3-209ENST00000477461 NWD2Q9ULI1 1742 aa4.46□□□□□ -1.7
UBR3-209ENST00000477461 MAPK8IP3Q9UPT6 1336 aa4.46□□□□□ -1.7
UBR3-209ENST00000477461 LMO7Q8WWI1 1683 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 SCN5AQ14524 2016 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 LGALS16A8MUM7 142 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 F5H423 210 aaPredicted RBP4.45□□□□□ -1.7
UBR3-209ENST00000477461 PIP5K1BO14986 540 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 RGS14O43566 566 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 CAMTA2O94983 1202 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 HMOX1P09601 288 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 KLRK1P26718 216 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 ALDH18A1P54886 795 aaKnown RBP4.45□□□□□ -1.7
UBR3-209ENST00000477461 TAS2R50P59544 299 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 RPL15P61313 204 aaKnown RBP4.45□□□□□ -1.7
UBR3-209ENST00000477461 ROR2Q01974 943 aaKnown RBP4.45□□□□□ -1.7
UBR3-209ENST00000477461 EGR4Q05215 589 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 CRYZQ08257 329 aaKnown RBP4.45□□□□□ -1.7
UBR3-209ENST00000477461 CHAF1AQ13111 956 aaPredicted RBP4.45□□□□□ -1.7
UBR3-209ENST00000477461 IZUMO4Q1ZYL8 232 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 FAM83BQ5T0W9 1011 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 TANGO2Q6ICL3 276 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 SULT6B1Q6IMI4 303 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 KDELC2Q7Z4H8 507 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 MDGA2Q7Z553 956 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 ADPRHL1Q8NDY3 354 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 ENGASEQ8NFI3 743 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 WDR60Q8WVS4 1066 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 POF1BQ8WVV4 589 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 REXO5Q96IC2 774 aaKnown RBP4.45□□□□□ -1.7
UBR3-209ENST00000477461 SLITRK1Q96PX8 696 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 RMDN3Q96TC7 470 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 PRPF18Q99633 342 aaKnown RBP4.45□□□□□ -1.7
UBR3-209ENST00000477461 KATNAL1Q9BW62 490 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.45□□□□□ -1.7
UBR3-209ENST00000477461 DCLK3Q9C098 648 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 CCDC134Q9H6E4 229 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 OBP2BQ9NPH6 170 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 PLSCR4Q9NRQ2 329 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 WNT16Q9UBV4 365 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 TRPC5Q9UL62 973 aaPredicted RBP4.45□□□□□ -1.7
UBR3-209ENST00000477461 CAMTA1Q9Y6Y1 1673 aa4.45□□□□□ -1.7
UBR3-209ENST00000477461 COL5A2P05997 1499 aaPredicted RBP4.44□□□□□ -1.7
UBR3-209ENST00000477461 LRP6O75581 1613 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 LOC105369274A0A096LPK9 316 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 LOC102723532A0A0G2JNH3 316 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 I6L893 689 aaPredicted RBP4.44□□□□□ -1.7
UBR3-209ENST00000477461 KLKB1P03952 638 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 ALDOAP04075 364 aaKnown RBP4.44□□□□□ -1.7
UBR3-209ENST00000477461 CSTBP04080 98 aaKnown RBP4.44□□□□□ -1.7
UBR3-209ENST00000477461 PRKAR2BP31323 418 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 GRK5P34947 590 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 FOXL2P58012 376 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 ABATP80404 500 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 RPL36AP83881 106 aaKnown RBP4.44□□□□□ -1.7
UBR3-209ENST00000477461 RNASELQ05823 741 aaKnown RBP4.44□□□□□ -1.7
UBR3-209ENST00000477461 BLMHQ13867 455 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 ALG10Q5BKT4 473 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 ALG10BQ5I7T1 473 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 FNBP1LQ5T0N5 605 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 RINLQ6ZS11 566 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 RBM23Q86U06 439 aaKnown RBP4.44□□□□□ -1.7
UBR3-209ENST00000477461 TRABD2AQ86V40 505 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 UNC5CLQ8IV45 518 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 FAM217AQ8IXS0 508 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 CACNA2D3Q8IZS8 1091 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 OR4N4Q8N0Y3 316 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 CADM3Q8N126 398 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 RMI1Q9H9A7 625 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 TXNRD2Q9NNW7 524 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 KRCC1Q9NPI7 259 aaPredicted RBP4.44□□□□□ -1.7
UBR3-209ENST00000477461 HERC5Q9UII4 1024 aaKnown RBP4.44□□□□□ -1.7
UBR3-209ENST00000477461 CRB1P82279 1406 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 AFF2P51816 1311 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 IGSF1Q8N6C5 1336 aa4.44□□□□□ -1.7
UBR3-209ENST00000477461 RGPD1P0DJD0 1748 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 NRAPQ86VF7 1730 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.43□□□□□ -1.7
UBR3-209ENST00000477461 SLIT2O94813 1529 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 AQP12BA6NM10 295 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 KIF28PB7ZC32 967 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 IFRD1O00458 451 aaPredicted RBP4.43□□□□□ -1.7
UBR3-209ENST00000477461 ASNA1O43681 348 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 RPP40O75818 363 aaKnown RBP4.43□□□□□ -1.7
UBR3-209ENST00000477461 LCATP04180 440 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 ARSBP15848 533 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 KLRC2P26717 231 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 HOXD3P31249 432 aaPredicted RBP4.43□□□□□ -1.7
UBR3-209ENST00000477461 AKT1P31749 480 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 COMPP49747 757 aaPredicted RBP4.43□□□□□ -1.7
UBR3-209ENST00000477461 FAM3BP58499 235 aaPredicted RBP4.43□□□□□ -1.7
UBR3-209ENST00000477461 PDCD2Q16342 344 aaPredicted RBP4.43□□□□□ -1.7
UBR3-209ENST00000477461 PLEKHO1Q53GL0 409 aaPredicted RBP4.43□□□□□ -1.7
UBR3-209ENST00000477461 C10orf62Q5T681 223 aaPredicted RBP4.43□□□□□ -1.7
UBR3-209ENST00000477461 DCAF12L2Q5VW00 463 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 ZNF772Q68DY9 489 aaPredicted RBP4.43□□□□□ -1.7
UBR3-209ENST00000477461 RINT1Q6NUQ1 792 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 PRSS57Q6UWY2 283 aa4.43□□□□□ -1.7
UBR3-209ENST00000477461 RTL10Q7L3V2 364 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms