RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 PLK2Q9NYY3 685 aa11.16□□□□□ -0.62
COL27A1-204ENST00000477421 GMIPQ9P107 970 aa11.16□□□□□ -0.62
COL27A1-204ENST00000477421 BTRCQ9Y297 605 aa11.16□□□□□ -0.62
COL27A1-204ENST00000477421 SH3BP1Q9Y3L3 701 aa11.16□□□□□ -0.62
COL27A1-204ENST00000477421 FARP1Q9Y4F1 1045 aaPredicted RBP11.16□□□□□ -0.62
COL27A1-204ENST00000477421 MOXD2PA6NHM9 499 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 MRASO14807 208 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 TYROBPO43914 113 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 PEX11AO75192 247 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 SH3BGRLO75368 114 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 TPBGLP0DKB5 382 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 VAV1P15498 845 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 DSC2Q02487 901 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 WASHC5Q12768 1159 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 SEMA5AQ13591 1074 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 TMEM198Q66K66 360 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 GLT6D1Q7Z4J2 308 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 ANKRD23Q86SG2 305 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 CLEC4FQ8N1N0 589 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 TTC30BQ8N4P2 665 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 PNPLA1Q8N8W4 532 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 TRPC4APQ8TEL6 797 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 SIGLEC10Q96LC7 697 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 LENG8Q96PV6 779 aaPredicted RBP11.15□□□□□ -0.62
COL27A1-204ENST00000477421 GIT1Q9Y2X7 761 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 AMHP03971 560 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 CRABP2P29373 138 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 HOXA11P31270 313 aaPredicted RBP11.15□□□□□ -0.62
COL27A1-204ENST00000477421 ABL2P42684 1182 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 ACSBG2Q5FVE4 666 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 RGMBQ6NW40 437 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 FAM156AQ8NDB6 213 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 BHLHE22Q8NFJ8 381 aaPredicted RBP11.15□□□□□ -0.62
COL27A1-204ENST00000477421 OR6Y1Q8NGX8 325 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 PRR11Q96HE9 360 aaPredicted RBP11.15□□□□□ -0.62
COL27A1-204ENST00000477421 PPP1R2P1Q96PQ5 205 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 CYP2S1Q96SQ9 504 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 NPAS2Q99743 824 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 PRKD2Q9BZL6 878 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 POLR1EQ9GZS1 481 aaKnown RBP11.15□□□□□ -0.62
COL27A1-204ENST00000477421 KLHL42Q9P2K6 505 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 CNTN6Q9UQ52 1028 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 SCN9AQ15858 1988 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 DOCK2Q92608 1830 aa11.15□□□□□ -0.62
COL27A1-204ENST00000477421 BIRC5O15392 142 aa11.15□□□□□ -0.63
COL27A1-204ENST00000477421 ANPEPP15144 967 aa11.15□□□□□ -0.63
COL27A1-204ENST00000477421 ME2P23368 584 aa11.15□□□□□ -0.63
COL27A1-204ENST00000477421 RPL9P32969 192 aaKnown RBP11.15□□□□□ -0.63
COL27A1-204ENST00000477421 ITGA7Q13683 1181 aa11.15□□□□□ -0.63
COL27A1-204ENST00000477421 NFYCQ13952 458 aa11.15□□□□□ -0.63
COL27A1-204ENST00000477421 FAM187BQ17R55 369 aa11.15□□□□□ -0.63
COL27A1-204ENST00000477421 NAIF1Q69YI7 327 aaPredicted RBP11.15□□□□□ -0.63
COL27A1-204ENST00000477421 TPGS1Q6ZTW0 290 aa11.15□□□□□ -0.63
COL27A1-204ENST00000477421 FBXO39Q8N4B4 442 aa11.15□□□□□ -0.63
COL27A1-204ENST00000477421 PTGR2Q8N8N7 351 aaPredicted RBP11.15□□□□□ -0.63
COL27A1-204ENST00000477421 CCDC126Q96EE4 140 aa11.15□□□□□ -0.63
COL27A1-204ENST00000477421 ACOX2Q99424 681 aa11.15□□□□□ -0.63
COL27A1-204ENST00000477421 ZYG11BQ9C0D3 744 aa11.15□□□□□ -0.63
COL27A1-204ENST00000477421 RHOJQ9H4E5 214 aa11.15□□□□□ -0.63
COL27A1-204ENST00000477421 ZMYM5Q9UJ78 669 aa11.15□□□□□ -0.63
COL27A1-204ENST00000477421 LSM7Q9UK45 103 aaKnown RBP11.15□□□□□ -0.63
COL27A1-204ENST00000477421 C10orf71Q711Q0 1435 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 CRTAMO95727 393 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 NELFEP18615 380 aaKnown RBP11.14□□□□□ -0.63
COL27A1-204ENST00000477421 NNMTP40261 264 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 PLD1Q13393 1074 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 RIPK1Q13546 671 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 INPP5AQ14642 412 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 VPS50Q96JG6 964 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 TBATAQ96M53 351 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 HBEGFQ99075 208 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 CCT7Q99832 543 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 WWOXQ9NZC7 414 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 FBXW11Q9UKB1 542 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 ORC6Q9Y5N6 252 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 SLCO1B7G3V0H7 640 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 PGM3O95394 542 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 HIST1H2AGP0C0S8 130 aaPredicted RBP11.14□□□□□ -0.63
COL27A1-204ENST00000477421 MLNP12872 115 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 RPL17P18621 184 aaKnown RBP11.14□□□□□ -0.63
COL27A1-204ENST00000477421 HIST1H2ADP20671 130 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 TAS2R39P59534 338 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 PCBP1Q15365 356 aaKnown RBP eCLIP11.14□□□□□ -0.634e-6■■□□□ 11.4
COL27A1-204ENST00000477421 NR6A1Q15406 480 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 OTUD3Q5T2D3 398 aaPredicted RBP11.14□□□□□ -0.63
COL27A1-204ENST00000477421 PKN3Q6P5Z2 889 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 DCLRE1AQ6PJP8 1040 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 ESAMQ96AP7 390 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 HIST1H2AHQ96KK5 128 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 HIST1H2AJQ99878 128 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 H2AFJQ9BTM1 129 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 TRIM54Q9BYV2 358 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 IGSF5Q9NSI5 407 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 KIAA1522Q9P206 1035 aaPredicted RBP11.14□□□□□ -0.63
COL27A1-204ENST00000477421 ZNF180Q9UJW8 692 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 ZMYND8Q9ULU4 1186 aaPredicted RBP11.14□□□□□ -0.63
COL27A1-204ENST00000477421 OR51F1A6NGY5 319 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 PSMD12O00232 456 aaPredicted RBP11.14□□□□□ -0.63
COL27A1-204ENST00000477421 INPP4BO15327 924 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 SPATA31D3P0C874 917 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms