RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 SLC8A1P32418 973 aa16.1■□□□□ 0.17
COPS3-207ENST00000477299 SCNN1BP51168 640 aa16.1■□□□□ 0.17
COPS3-207ENST00000477299 NIPAL4Q0D2K0 466 aa16.1■□□□□ 0.17
COPS3-207ENST00000477299 SNX1Q13596 522 aa16.1■□□□□ 0.17
COPS3-207ENST00000477299 HNRNPDQ14103 355 aaKnown RBP16.1■□□□□ 0.17
COPS3-207ENST00000477299 ELAVL3Q14576 367 aaKnown RBP16.1■□□□□ 0.17
COPS3-207ENST00000477299 E2F5Q15329 346 aa16.1■□□□□ 0.17
COPS3-207ENST00000477299 CST6Q15828 149 aa16.1■□□□□ 0.17
COPS3-207ENST00000477299 SYT10Q6XYQ8 523 aa16.1■□□□□ 0.17
COPS3-207ENST00000477299 FAM124AQ86V42 546 aa16.1■□□□□ 0.17
COPS3-207ENST00000477299 LRRC49Q8IUZ0 686 aa16.1■□□□□ 0.17
COPS3-207ENST00000477299 TFB1MQ8WVM0 346 aaKnown RBP16.1■□□□□ 0.17
COPS3-207ENST00000477299 CASKIN2Q8WXE0 1202 aa16.1■□□□□ 0.17
COPS3-207ENST00000477299 TRIM44Q96DX7 344 aaPredicted RBP16.1■□□□□ 0.17
COPS3-207ENST00000477299 QKIQ96PU8 341 aaKnown RBP eCLIP16.1■□□□□ 0.17
COPS3-207ENST00000477299 PSKH2Q96QS6 385 aa16.1■□□□□ 0.17
COPS3-207ENST00000477299 HEPHQ9BQS7 1158 aa16.1■□□□□ 0.17
COPS3-207ENST00000477299 SEPT3Q9UH03 358 aa16.1■□□□□ 0.17
COPS3-207ENST00000477299 MBD1Q9UIS9 605 aaPredicted RBP16.1■□□□□ 0.17
COPS3-207ENST00000477299 DNPEPQ9ULA0 475 aa16.1■□□□□ 0.17
COPS3-207ENST00000477299 R4GN57 208 aa16.1■□□□□ 0.17
COPS3-207ENST00000477299 USP34Q70CQ2 3546 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 HRO43593 1189 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 IGSF6O95976 241 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 UGT2B4P06133 528 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 ITIH2P19823 946 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 CR2P20023 1033 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 BCKDHBP21953 392 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 PTPN3P26045 913 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 HOXA6P31267 233 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 DRD3P35462 400 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 TPMTP51580 245 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 SNRPD1P62314 119 aaKnown RBP16.09■□□□□ 0.17
COPS3-207ENST00000477299 IFI35P80217 286 aaPredicted RBP16.09■□□□□ 0.17
COPS3-207ENST00000477299 DSC2Q02487 901 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 ZNF235Q14590 738 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 RFTN1Q14699 578 aaPredicted RBP16.09■□□□□ 0.17
COPS3-207ENST00000477299 MAP7D1Q3KQU3 841 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 SLC45A4Q5BKX6 768 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 ZNF776Q68DI1 518 aaPredicted RBP16.09■□□□□ 0.17
COPS3-207ENST00000477299 NYAP1Q6ZVC0 841 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 PRUNE1Q86TP1 453 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 CAMK1DQ8IU85 385 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 RASGEF1CQ8N431 466 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 DEFB119Q8N690 84 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 SLC35B2Q8TB61 432 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 ARRDC2Q8TBH0 407 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 UBE2Q2Q8WVN8 375 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 PRCCQ92733 491 aaPredicted RBP16.09■□□□□ 0.17
COPS3-207ENST00000477299 PBKQ96KB5 322 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 GDAP1L1Q96MZ0 367 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 AGAP3Q96P47 875 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 USP29Q9HBJ7 922 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 NOD2Q9HC29 1040 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 ITM2CQ9NQX7 267 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 FAM86C1Q9NVL1 165 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 IL36AQ9UHA7 158 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 ATP8A1Q9Y2Q0 1164 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 TTLL3Q9Y4R7 772 aa16.09■□□□□ 0.17
COPS3-207ENST00000477299 A0A1W2PP55 124 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 KPNA3O00505 521 aaPredicted RBP16.08■□□□□ 0.16
COPS3-207ENST00000477299 PPP1R12AO14974 1030 aaPredicted RBP16.08■□□□□ 0.16
COPS3-207ENST00000477299 ZBTB24O43167 697 aaPredicted RBP16.08■□□□□ 0.16
COPS3-207ENST00000477299 ALDH1A2O94788 518 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 POP4O95707 220 aaKnown RBP16.08■□□□□ 0.16
COPS3-207ENST00000477299 C7P10643 843 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 CD68P34810 354 aaPredicted RBP16.08■□□□□ 0.16
COPS3-207ENST00000477299 RECQLP46063 649 aaPredicted RBP16.08■□□□□ 0.16
COPS3-207ENST00000477299 GDF10P55107 478 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 ETF1P62495 437 aaKnown RBP16.08■□□□□ 0.16
COPS3-207ENST00000477299 ITKQ08881 620 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 CNTN1Q12860 1018 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 XRCC4Q13426 336 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 LONRF2Q1L5Z9 754 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 LRRC73Q5JTD7 316 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 PAPD7Q5XG87 772 aaKnown RBP16.08■□□□□ 0.16
COPS3-207ENST00000477299 TIGD7Q6NT04 549 aaPredicted RBP16.08■□□□□ 0.16
COPS3-207ENST00000477299 DARS2Q6PI48 645 aaKnown RBP16.08■□□□□ 0.16
COPS3-207ENST00000477299 NCEH1Q6PIU2 408 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 WDR5BQ86VZ2 330 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 LONP2Q86WA8 852 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 ZSWIM9Q86XI8 627 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 PLPP6Q8IY26 295 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 ZNF567Q8N184 647 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 NSMCE1Q8WV22 266 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 HTR3CQ8WXA8 447 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 FATE1Q969F0 183 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 C16orf45Q96MC5 204 aaPredicted RBP16.08■□□□□ 0.16
COPS3-207ENST00000477299 KLHL32Q96NJ5 620 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 NAPGQ99747 312 aaPredicted RBP16.08■□□□□ 0.16
COPS3-207ENST00000477299 SEMA3CQ99985 751 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 MGME1Q9BQP7 344 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 AP1M1Q9BXS5 423 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 NEUROG2Q9H2A3 272 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 PABPC3Q9H361 631 aaKnown RBP16.08■□□□□ 0.16
COPS3-207ENST00000477299 PCDHGC4Q9Y5F7 938 aa16.08■□□□□ 0.16
COPS3-207ENST00000477299 PDE2AO00408 941 aaPredicted RBP16.07■□□□□ 0.16
COPS3-207ENST00000477299 PRKCGP05129 697 aa16.07■□□□□ 0.16
COPS3-207ENST00000477299 MMP2P08253 660 aa16.07■□□□□ 0.16
COPS3-207ENST00000477299 KCNJ1P48048 391 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms