RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 KBTBD6Q86V97 674 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 ZC3H18Q86VM9 953 aaKnown RBP2.97□□□□□ -1.93
HMGN4-202ENST00000477243 FBXO11Q86XK2 927 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 PLXDC1Q8IUK5 500 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 UNC5BQ8IZJ1 945 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 CLYBLQ8N0X4 340 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 IL17RCQ8NAC3 791 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 XXYLT1Q8NBI6 393 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 CAMKVQ8NCB2 501 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 TSPAN14Q8NG11 270 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 NEK11Q8NG66 645 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 OR52K1Q8NGK4 314 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 SLC2A12Q8TD20 617 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 RNF139Q8WU17 664 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 THRSPQ92748 146 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 CORO2AQ92828 525 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 ARSGQ96EG1 525 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 ALG14Q96F25 216 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 PERPQ96FX8 193 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 ZDHHC12Q96GR4 267 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 REXO5Q96IC2 774 aaKnown RBP2.97□□□□□ -1.93
HMGN4-202ENST00000477243 NLRP4Q96MN2 994 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 PARK7Q99497 189 aaKnown RBP2.97□□□□□ -1.93
HMGN4-202ENST00000477243 PLIN2Q99541 437 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 MESP1Q9BRJ9 268 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 SPATA5L1Q9BVQ7 753 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 GCOM2Q9BZD3 368 aaPredicted RBP2.97□□□□□ -1.93
HMGN4-202ENST00000477243 WDR11Q9BZH6 1224 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 LRRCC1Q9C099 1032 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 MRPL18Q9H0U6 180 aaKnown RBP2.97□□□□□ -1.93
HMGN4-202ENST00000477243 XYLT2Q9H1B5 865 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 OR10A5Q9H207 317 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 ST6GALNAC4Q9H4F1 302 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 DENND2DQ9H6A0 471 aaPredicted RBP2.97□□□□□ -1.93
HMGN4-202ENST00000477243 SCPEP1Q9HB40 452 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 FBRSL1Q9HCM7 1045 aaKnown RBP2.97□□□□□ -1.93
HMGN4-202ENST00000477243 ATP13A1Q9HD20 1204 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 PIH1D3Q9NQM4 214 aaKnown RBP2.97□□□□□ -1.93
HMGN4-202ENST00000477243 RRP7BPQ9NSQ0 103 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 TCP11L1Q9NUJ3 509 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 SPATA6Q9NWH7 488 aaPredicted RBP2.97□□□□□ -1.93
HMGN4-202ENST00000477243 ARHGEF38Q9NXL2 777 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 HSPBP1Q9NZL4 362 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 JKAMPQ9P055 326 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 SAE1Q9UBE0 346 aaPredicted RBP2.97□□□□□ -1.93
HMGN4-202ENST00000477243 TRPC4Q9UBN4 977 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 DNAJB11Q9UBS4 358 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 CLIP2Q9UDT6 1046 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 FBXO40Q9UH90 709 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 TRPS1Q9UHF7 1281 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 FAM153AQ9UHL3 310 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 DUSP13Q9UII6 198 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 CD207Q9UJ71 328 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 GGA1Q9UJY5 639 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 RCOR1Q9UKL0 485 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 CCPG1Q9ULG6 757 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 NENFQ9UMX5 172 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 CDYLQ9Y232 598 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 ITM2BQ9Y287 266 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 ZBTB1Q9Y2K1 713 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 PCDHGA5Q9Y5G8 931 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 PCDHGA1Q9Y5H4 931 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 CAPN7Q9Y6W3 813 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 SLIT1O75093 1534 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 KDRP35968 1356 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 DHX29Q7Z478 1369 aaKnown RBP2.97□□□□□ -1.93
HMGN4-202ENST00000477243 SMG1Q96Q15 3661 aaKnown RBP2.97□□□□□ -1.93
HMGN4-202ENST00000477243 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.96□□□□□ -1.93
HMGN4-202ENST00000477243 FAM205AQ6ZU69 1335 aa2.96□□□□□ -1.93
HMGN4-202ENST00000477243 USP6P35125 1406 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 CYP2D7A0A087X1C5 515 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 A0A0A6YYK5 440 aaPredicted RBP2.96□□□□□ -1.94
HMGN4-202ENST00000477243 TEX13CA0A0J9YWL9 993 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 LINC00854A0A1B0GVQ3 168 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 A0A1W2PRG0 241 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 SH3D21A4FU49 640 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 MBD3L5A6NJ08 208 aaPredicted RBP2.96□□□□□ -1.94
HMGN4-202ENST00000477243 FAM90A7PA6NKC0 464 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 LRRC53A6NM62 1247 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 FAM90A22PA8MWA6 464 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 FAM90A12PA8MX19 464 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 FAM90A23PA8MXZ1 464 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 BTBD18B2RXH4 712 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 H0YIV9 168 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 SYN3O14994 580 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 TO15178 435 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 WIPF1O43516 503 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 RGS10O43665 173 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 BUB1O43683 1085 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 SPOPO43791 374 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 VEGFDO43915 354 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 DEAF1O75398 565 aaPredicted RBP2.96□□□□□ -1.94
HMGN4-202ENST00000477243 IDH1O75874 414 aaKnown RBP2.96□□□□□ -1.94
HMGN4-202ENST00000477243 SLITRK3O94933 977 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 RASAL1O95294 804 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 IPO7O95373 1038 aaKnown RBP2.96□□□□□ -1.94
HMGN4-202ENST00000477243 C22orf31O95567 290 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 MPIG6BO95866 241 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 MPOP05164 745 aa2.96□□□□□ -1.94
HMGN4-202ENST00000477243 URODP06132 367 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms