RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 WASH4PA8MWX3 477 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 ADRA1AP35348 466 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 SESN3P58005 492 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 AP2B1P63010 937 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 ASPHQ12797 758 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 C1orf146Q5VVC0 180 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 LIPMQ5VYY2 423 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 AFMIDQ63HM1 303 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 AAGABQ6PD74 315 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.66■□□□□ 0.26
TMEM53-208ENST00000476724 ARHGAP36Q6ZRI8 547 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 RIPOR1Q6ZS17 1223 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 MYLK4Q86YV6 388 aaPredicted RBP16.66■□□□□ 0.26
TMEM53-208ENST00000476724 ZNF781Q8N8C0 355 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 RTL3Q8N8U3 475 aaKnown RBP16.66■□□□□ 0.26
TMEM53-208ENST00000476724 SPATA22Q8NHS9 363 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 VWCEQ96DN2 955 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 B3GALT6Q96L58 329 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 SERPINB11Q96P15 392 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 PANX3Q96QZ0 392 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 GATA5Q9BWX5 397 aaPredicted RBP16.66■□□□□ 0.26
TMEM53-208ENST00000476724 PRKD2Q9BZL6 878 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 UBE2OQ9C0C9 1292 aaKnown RBP16.66■□□□□ 0.26
TMEM53-208ENST00000476724 DRC3Q9H069 523 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 TASP1Q9H6P5 420 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 DONSONQ9NYP3 566 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 RAP2CQ9Y3L5 183 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 A0A088AWK7 358 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 E2F8A0AVK6 867 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 KCNU1A8MYU2 1149 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 NT5C1B-RDH14C9J2C7 533 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 SLCO1B7G3V0H7 640 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 TADA2AO75478 443 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 AHSGP02765 367 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 GMPRP36959 345 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 TUBP50607 506 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 DENND5AQ6IQ26 1287 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 NAPRTQ6XQN6 538 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 TDRD5Q8NAT2 981 aaKnown RBP16.66■□□□□ 0.26
TMEM53-208ENST00000476724 IPMKQ8NFU5 416 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 CASP10Q92851 521 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 TOX2Q96NM4 488 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 RBM22Q9NW64 420 aaKnown RBP eCLIP16.66■□□□□ 0.26
TMEM53-208ENST00000476724 MARCH5Q9NX47 278 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 SFMBT1Q9UHJ3 866 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 ACOT9Q9Y305 439 aa16.66■□□□□ 0.26
TMEM53-208ENST00000476724 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.65■□□□□ 0.26
TMEM53-208ENST00000476724 NEBLO76041 1014 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 SNUPNO95149 360 aaKnown RBP16.65■□□□□ 0.26
TMEM53-208ENST00000476724 MT-CYBP00156 380 aaPredicted RBP16.65■□□□□ 0.26
TMEM53-208ENST00000476724 SLC2A3P11169 496 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 NCF2P19878 526 aaPredicted RBP16.65■□□□□ 0.26
TMEM53-208ENST00000476724 SLC11A1P49279 550 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 TMCO4Q5TGY1 634 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 TRIM68Q6AZZ1 485 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 SCD5Q86SK9 330 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 NPAS4Q8IUM7 802 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 GABPB2Q8TAK5 448 aaPredicted RBP16.65■□□□□ 0.26
TMEM53-208ENST00000476724 NRG4Q8WWG1 115 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 SCG3Q8WXD2 468 aaKnown RBP16.65■□□□□ 0.26
TMEM53-208ENST00000476724 FICDQ9BVA6 458 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 GPR62Q9BZJ7 368 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 TBX21Q9UL17 535 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 RUVBL2Q9Y230 463 aaKnown RBP16.65■□□□□ 0.26
TMEM53-208ENST00000476724 TCAF1Q9Y4C2 921 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.65■□□□□ 0.26
TMEM53-208ENST00000476724 TBKBP1A7MCY6 615 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 E9PAM4 449 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 MAP3K7O43318 606 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 CCNT2O60583 730 aaKnown RBP16.65■□□□□ 0.26
TMEM53-208ENST00000476724 CRABP2P29373 138 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 ARCN1P48444 511 aaKnown RBP16.65■□□□□ 0.26
TMEM53-208ENST00000476724 MLLT6P55198 1093 aaPredicted RBP16.65■□□□□ 0.26
TMEM53-208ENST00000476724 MRPS35P82673 323 aaKnown RBP16.65■□□□□ 0.26
TMEM53-208ENST00000476724 USP4Q13107 963 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 SLC39A12Q504Y0 691 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 RANBP10Q6VN20 620 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 MON1AQ86VX9 555 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 TMEM173Q86WV6 379 aaPredicted RBP16.65■□□□□ 0.26
TMEM53-208ENST00000476724 DCP1BQ8IZD4 617 aaKnown RBP16.65■□□□□ 0.26
TMEM53-208ENST00000476724 TMEM151AQ8N4L1 468 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 ACVR1CQ8NER5 493 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 DTX3LQ8TDB6 740 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 ACTRT2Q8TDY3 377 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 STYXQ8WUJ0 223 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 FATE1Q969F0 183 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 FSD1LQ9BXM9 530 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 VTI1BQ9UEU0 232 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 LRCH1Q9Y2L9 728 aa16.65■□□□□ 0.26
TMEM53-208ENST00000476724 GOLGA8TH3BQL2 631 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 MATN2O00339 956 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 HDAC3O15379 428 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 UPP2O95045 317 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 OAZ2O95190 189 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 VAPBO95292 243 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 SLC35E2BP0CK96 405 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 STMN1P16949 149 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 GABRB3P28472 473 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 ABCG1P45844 678 aa16.64■□□□□ 0.25
TMEM53-208ENST00000476724 NUMBP49757 651 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms