RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 OR2A12Q8NGT7 310 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 SAP25Q8TEE9 199 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 TRIM7Q9C029 511 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 CEP44Q9C0F1 390 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 DHX35Q9H5Z1 703 aaKnown RBP16.5■□□□□ 0.23
COL1A1-205ENST00000476387 GPATCH2LQ9NWQ4 482 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 DONSONQ9NYP3 566 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 PCSK1NQ9UHG2 260 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 PLXNB3Q9ULL4 1909 aa16.5■□□□□ 0.23
COL1A1-205ENST00000476387 COL5A1P20908 1838 aaPredicted RBP16.49■□□□□ 0.23
COL1A1-205ENST00000476387 A0A087X0T9 212 aa16.49■□□□□ 0.23
COL1A1-205ENST00000476387 CXorf51AA0A1B0GTR3 108 aa16.49■□□□□ 0.23
COL1A1-205ENST00000476387 EIF3CLB5ME19 914 aaKnown RBP16.49■□□□□ 0.23
COL1A1-205ENST00000476387 SMAD6O43541 496 aaKnown RBP16.49■□□□□ 0.23
COL1A1-205ENST00000476387 ZMPSTE24O75844 475 aa16.49■□□□□ 0.23
COL1A1-205ENST00000476387 PRNPP04156 253 aa16.49■□□□□ 0.23
COL1A1-205ENST00000476387 ITGAVP06756 1048 aa16.49■□□□□ 0.23
COL1A1-205ENST00000476387 CTSLP07711 333 aa16.49■□□□□ 0.23
COL1A1-205ENST00000476387 FAM228BP0C875 321 aa16.49■□□□□ 0.23
COL1A1-205ENST00000476387 ARF5P84085 180 aa16.49■□□□□ 0.23
COL1A1-205ENST00000476387 TSR1Q2NL82 804 aaKnown RBP16.49■□□□□ 0.23
COL1A1-205ENST00000476387 POM121L1PQ3SYA9 428 aa16.49■□□□□ 0.23
COL1A1-205ENST00000476387 SETMARQ53H47 684 aaPredicted RBP16.49■□□□□ 0.23
COL1A1-205ENST00000476387 ERMARDQ5T6L9 678 aa16.49■□□□□ 0.23
COL1A1-205ENST00000476387 PIP5KL1Q5T9C9 394 aa16.49■□□□□ 0.23
COL1A1-205ENST00000476387 ARHGEF2Q92974 986 aaKnown RBP16.49■□□□□ 0.23
COL1A1-205ENST00000476387 EIF3CQ99613 913 aaKnown RBP16.49■□□□□ 0.23
COL1A1-205ENST00000476387 SNRNP25Q9BV90 132 aaKnown RBP16.49■□□□□ 0.23
COL1A1-205ENST00000476387 TNKS2Q9H2K2 1166 aa16.49■□□□□ 0.23
COL1A1-205ENST00000476387 DYRK4Q9NR20 520 aa16.49■□□□□ 0.23
COL1A1-205ENST00000476387 ZNHIT6Q9NWK9 470 aaKnown RBP16.49■□□□□ 0.23
COL1A1-205ENST00000476387 PCDHGA1Q9Y5H4 931 aa16.49■□□□□ 0.23
COL1A1-205ENST00000476387 ZSCAN5CA6NGD5 496 aaPredicted RBP16.48■□□□□ 0.23
COL1A1-205ENST00000476387 GOLGA8CPA6NN73 597 aa16.48■□□□□ 0.23
COL1A1-205ENST00000476387 PRAMEF26H0Y7S4 382 aa16.48■□□□□ 0.23
COL1A1-205ENST00000476387 KPNA3O00505 521 aaPredicted RBP16.48■□□□□ 0.23
COL1A1-205ENST00000476387 RNGTTO60942 597 aaKnown RBP16.48■□□□□ 0.23
COL1A1-205ENST00000476387 EPHA8P29322 1005 aaPredicted RBP16.48■□□□□ 0.23
COL1A1-205ENST00000476387 MIPP30301 263 aa16.48■□□□□ 0.23
COL1A1-205ENST00000476387 DNA2P51530 1060 aa16.48■□□□□ 0.23
COL1A1-205ENST00000476387 TAS2R38P59533 333 aa16.48■□□□□ 0.23
COL1A1-205ENST00000476387 SMAD1Q15797 465 aaKnown RBP16.48■□□□□ 0.23
COL1A1-205ENST00000476387 PRAMEF14Q5SWL7 426 aa16.48■□□□□ 0.23
COL1A1-205ENST00000476387 CCDC122Q5T0U0 273 aa16.48■□□□□ 0.23
COL1A1-205ENST00000476387 ALKBH5Q6P6C2 394 aaKnown RBP16.48■□□□□ 0.23
COL1A1-205ENST00000476387 GATAD2AQ86YP4 633 aa16.48■□□□□ 0.23
COL1A1-205ENST00000476387 VSTM4Q8IW00 320 aa16.48■□□□□ 0.23
COL1A1-205ENST00000476387 OR8K1Q8NGG5 319 aa16.48■□□□□ 0.23
COL1A1-205ENST00000476387 GRIN3AQ8TCU5 1115 aa16.48■□□□□ 0.23
COL1A1-205ENST00000476387 PPP1R16AQ96I34 528 aa16.48■□□□□ 0.23
COL1A1-205ENST00000476387 PEBP4Q96S96 227 aa16.48■□□□□ 0.23
COL1A1-205ENST00000476387 HDAC8Q9BY41 377 aa16.48■□□□□ 0.23
COL1A1-205ENST00000476387 THAP2Q9H0W7 228 aa16.48■□□□□ 0.23
COL1A1-205ENST00000476387 DEF6Q9H4E7 631 aa16.48■□□□□ 0.23
COL1A1-205ENST00000476387 CCDC86Q9H6F5 360 aaKnown RBP16.48■□□□□ 0.23
COL1A1-205ENST00000476387 IL36AQ9UHA7 158 aa16.48■□□□□ 0.23
COL1A1-205ENST00000476387 FCF1Q9Y324 198 aaKnown RBP16.48■□□□□ 0.23
COL1A1-205ENST00000476387 DOCK9Q9BZ29 2069 aa16.48■□□□□ 0.23
COL1A1-205ENST00000476387 WASH4PA8MWX3 477 aa16.47■□□□□ 0.23
COL1A1-205ENST00000476387 TAF4O00268 1085 aa16.47■□□□□ 0.23
COL1A1-205ENST00000476387 EEF2KO00418 725 aaKnown RBP16.47■□□□□ 0.23
COL1A1-205ENST00000476387 DAPK3O43293 454 aa16.47■□□□□ 0.23
COL1A1-205ENST00000476387 LRCH4O75427 683 aa16.47■□□□□ 0.23
COL1A1-205ENST00000476387 C1SP09871 688 aa16.47■□□□□ 0.23
COL1A1-205ENST00000476387 CDK4P11802 303 aa16.47■□□□□ 0.23
COL1A1-205ENST00000476387 MAT2AP31153 395 aaKnown RBP16.47■□□□□ 0.23
COL1A1-205ENST00000476387 HNRNPH3P31942 346 aaKnown RBP16.47■□□□□ 0.23
COL1A1-205ENST00000476387 YBEYP58557 167 aaPredicted RBP16.47■□□□□ 0.23
COL1A1-205ENST00000476387 STAT4Q14765 748 aa16.47■□□□□ 0.23
COL1A1-205ENST00000476387 ACAP1Q15027 740 aa16.47■□□□□ 0.23
COL1A1-205ENST00000476387 PARP15Q460N3 678 aa16.47■□□□□ 0.23
COL1A1-205ENST00000476387 DPY19L3Q6ZPD9 716 aa16.47■□□□□ 0.23
COL1A1-205ENST00000476387 SPATS2Q86XZ4 545 aaKnown RBP16.47■□□□□ 0.23
COL1A1-205ENST00000476387 PSTKQ8IV42 348 aaKnown RBP16.47■□□□□ 0.23
COL1A1-205ENST00000476387 DNAJC7Q99615 494 aa16.47■□□□□ 0.23
COL1A1-205ENST00000476387 NUP85Q9BW27 656 aa16.47■□□□□ 0.23
COL1A1-205ENST00000476387 DKK4Q9UBT3 224 aa16.47■□□□□ 0.23
COL1A1-205ENST00000476387 ANAPC7Q9UJX3 599 aa16.47■□□□□ 0.23
COL1A1-205ENST00000476387 ENC1O14682 589 aa16.46■□□□□ 0.23
COL1A1-205ENST00000476387 BUB1O43683 1085 aa16.46■□□□□ 0.23
COL1A1-205ENST00000476387 KDELR3O43731 214 aa16.46■□□□□ 0.23
COL1A1-205ENST00000476387 LDOC1O95751 146 aaPredicted RBP16.46■□□□□ 0.23
COL1A1-205ENST00000476387 PCK1P35558 622 aa16.46■□□□□ 0.23
COL1A1-205ENST00000476387 EIF4A3P38919 411 aaKnown RBP16.46■□□□□ 0.23
COL1A1-205ENST00000476387 CCNHP51946 323 aaPredicted RBP16.46■□□□□ 0.23
COL1A1-205ENST00000476387 ZNF135P52742 658 aaPredicted RBP16.46■□□□□ 0.23
COL1A1-205ENST00000476387 PIGHQ14442 188 aaPredicted RBP16.46■□□□□ 0.23
COL1A1-205ENST00000476387 CA9Q16790 459 aa16.46■□□□□ 0.23
COL1A1-205ENST00000476387 CARD16Q5EG05 197 aa16.46■□□□□ 0.23
COL1A1-205ENST00000476387 PPP6R3Q5H9R7 873 aaPredicted RBP16.46■□□□□ 0.23
COL1A1-205ENST00000476387 ERN2Q76MJ5 926 aaKnown RBP16.46■□□□□ 0.23
COL1A1-205ENST00000476387 HORMAD1Q86X24 394 aa16.46■□□□□ 0.23
COL1A1-205ENST00000476387 RYBPQ8N488 228 aaPredicted RBP16.46■□□□□ 0.23
COL1A1-205ENST00000476387 ARFGAP1Q8N6T3 406 aa16.46■□□□□ 0.23
COL1A1-205ENST00000476387 TMEM145Q8NBT3 493 aa16.46■□□□□ 0.23
COL1A1-205ENST00000476387 CHST14Q8NCH0 376 aa16.46■□□□□ 0.23
COL1A1-205ENST00000476387 ISG20Q96AZ6 181 aaKnown RBP16.46■□□□□ 0.23
COL1A1-205ENST00000476387 ARRDC3Q96B67 414 aa16.46■□□□□ 0.23
COL1A1-205ENST00000476387 CNDP2Q96KP4 475 aaKnown RBP16.46■□□□□ 0.23
COL1A1-205ENST00000476387 KCTD15Q96SI1 283 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms