RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 PDFQ9HBH1 243 aa21.51■■□□□ 1.03
LIME1-204ENST00000476183 TM7SF3Q9NS93 570 aa21.51■■□□□ 1.03
LIME1-204ENST00000476183 ACACBO00763 2458 aa21.51■■□□□ 1.03
LIME1-204ENST00000476183 A0A1W2PQU0 124 aa21.5■■□□□ 1.03
LIME1-204ENST00000476183 H0Y8X5 98 aa21.5■■□□□ 1.03
LIME1-204ENST00000476183 J3KR12 359 aa21.5■■□□□ 1.03
LIME1-204ENST00000476183 DAPK3O43293 454 aa21.5■■□□□ 1.03
LIME1-204ENST00000476183 CD38P28907 300 aa21.5■■□□□ 1.03
LIME1-204ENST00000476183 PMLP29590 882 aa21.5■■□□□ 1.03
LIME1-204ENST00000476183 HCAR3P49019 387 aa21.5■■□□□ 1.03
LIME1-204ENST00000476183 ADKP55263 362 aaKnown RBP21.5■■□□□ 1.03
LIME1-204ENST00000476183 SLC25A11Q02978 314 aaKnown RBP21.5■■□□□ 1.03
LIME1-204ENST00000476183 CYTH1Q15438 398 aa21.5■■□□□ 1.03
LIME1-204ENST00000476183 DPYSL2Q16555 572 aa21.5■■□□□ 1.03
LIME1-204ENST00000476183 SLC18A3Q16572 532 aa21.5■■□□□ 1.03
LIME1-204ENST00000476183 MYLK3Q32MK0 819 aa21.5■■□□□ 1.03
LIME1-204ENST00000476183 NAPEPLDQ6IQ20 393 aa21.5■■□□□ 1.03
LIME1-204ENST00000476183 PARS2Q7L3T8 475 aaKnown RBP21.5■■□□□ 1.03
LIME1-204ENST00000476183 CPNE8Q86YQ8 564 aa21.5■■□□□ 1.03
LIME1-204ENST00000476183 CASKIN2Q8WXE0 1202 aa21.5■■□□□ 1.03
LIME1-204ENST00000476183 CHP1Q99653 195 aa21.5■■□□□ 1.03
LIME1-204ENST00000476183 ABHD10Q9NUJ1 306 aa21.5■■□□□ 1.03
LIME1-204ENST00000476183 IP6K2Q9UHH9 426 aa21.5■■□□□ 1.03
LIME1-204ENST00000476183 MFHAS1Q9Y4C4 1052 aa21.5■■□□□ 1.03
LIME1-204ENST00000476183 SPEGQ15772 3267 aa21.5■■□□□ 1.03
LIME1-204ENST00000476183 TRPM6Q9BX84 2022 aa21.5■■□□□ 1.03
LIME1-204ENST00000476183 SPAARA0A1B0GVQ0 90 aa21.49■■□□□ 1.03
LIME1-204ENST00000476183 KRIT1O00522 736 aa21.49■■□□□ 1.03
LIME1-204ENST00000476183 PRAMEF11O60813 436 aa21.49■■□□□ 1.03
LIME1-204ENST00000476183 MFAP3LO75121 409 aa21.49■■□□□ 1.03
LIME1-204ENST00000476183 RARAP10276 462 aa21.49■■□□□ 1.03
LIME1-204ENST00000476183 ADRB3P13945 408 aa21.49■■□□□ 1.03
LIME1-204ENST00000476183 PAPOLAP51003 745 aaKnown RBP21.49■■□□□ 1.03
LIME1-204ENST00000476183 NEK3P51956 506 aa21.49■■□□□ 1.03
LIME1-204ENST00000476183 C21orf59P57076 290 aa21.49■■□□□ 1.03
LIME1-204ENST00000476183 CCDC15Q0P6D6 951 aa21.49■■□□□ 1.03
LIME1-204ENST00000476183 ZNF423Q2M1K9 1284 aa21.49■■□□□ 1.03
LIME1-204ENST00000476183 ZNF284Q2VY69 593 aa21.49■■□□□ 1.03
LIME1-204ENST00000476183 BOLA3Q53S33 107 aa21.49■■□□□ 1.03
LIME1-204ENST00000476183 PRAMEF14Q5SWL7 426 aa21.49■■□□□ 1.03
LIME1-204ENST00000476183 NEK5Q6P3R8 708 aa21.49■■□□□ 1.03
LIME1-204ENST00000476183 HORMAD1Q86X24 394 aa21.49■■□□□ 1.03
LIME1-204ENST00000476183 NAXDQ8IW45 347 aa21.49■■□□□ 1.03
LIME1-204ENST00000476183 TP53INP2Q8IXH6 220 aa21.49■■□□□ 1.03
LIME1-204ENST00000476183 ZNF564Q8TBZ8 553 aaPredicted RBP21.49■■□□□ 1.03
LIME1-204ENST00000476183 HSPH1Q92598 858 aa21.49■■□□□ 1.03
LIME1-204ENST00000476183 KLK6Q92876 244 aa21.49■■□□□ 1.03
LIME1-204ENST00000476183 DONSONQ9NYP3 566 aa21.49■■□□□ 1.03
LIME1-204ENST00000476183 LHX3Q9UBR4 397 aa21.49■■□□□ 1.03
LIME1-204ENST00000476183 UBA2Q9UBT2 640 aaPredicted RBP21.49■■□□□ 1.03
LIME1-204ENST00000476183 ZFR2Q9UPR6 939 aaKnown RBP21.49■■□□□ 1.03
LIME1-204ENST00000476183 CA5BQ9Y2D0 317 aa21.49■■□□□ 1.03
LIME1-204ENST00000476183 SSU72P8A0A1W2PR75 194 aa21.48■■□□□ 1.03
LIME1-204ENST00000476183 MYO1FO00160 1098 aa21.48■■□□□ 1.03
LIME1-204ENST00000476183 POP4O95707 220 aaKnown RBP21.48■■□□□ 1.03
LIME1-204ENST00000476183 UGT2B4P06133 528 aa21.48■■□□□ 1.03
LIME1-204ENST00000476183 PRLRP16471 622 aa21.48■■□□□ 1.03
LIME1-204ENST00000476183 ZNF135P52742 658 aaPredicted RBP21.48■■□□□ 1.03
LIME1-204ENST00000476183 RHOAP61586 193 aa21.48■■□□□ 1.03
LIME1-204ENST00000476183 SEL1L3Q68CR1 1132 aa21.48■■□□□ 1.03
LIME1-204ENST00000476183 DBX2Q6ZNG2 339 aa21.48■■□□□ 1.03
LIME1-204ENST00000476183 ARHGAP36Q6ZRI8 547 aa21.48■■□□□ 1.03
LIME1-204ENST00000476183 POLNQ7Z5Q5 900 aa21.48■■□□□ 1.03
LIME1-204ENST00000476183 LRIG1Q96JA1 1093 aa21.48■■□□□ 1.03
LIME1-204ENST00000476183 EXOC2Q96KP1 924 aa21.48■■□□□ 1.03
LIME1-204ENST00000476183 GDAP1L1Q96MZ0 367 aa21.48■■□□□ 1.03
LIME1-204ENST00000476183 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.48■■□□□ 1.03
LIME1-204ENST00000476183 ETNK2Q9NVF9 386 aa21.48■■□□□ 1.03
LIME1-204ENST00000476183 DMTF1Q9Y222 760 aa21.48■■□□□ 1.03
LIME1-204ENST00000476183 FADS3Q9Y5Q0 445 aa21.48■■□□□ 1.03
LIME1-204ENST00000476183 ARHGAP42A6NI28 874 aa21.47■■□□□ 1.03
LIME1-204ENST00000476183 C16orf96A6NNT2 1141 aa21.47■■□□□ 1.03
LIME1-204ENST00000476183 SLC31A1O15431 190 aa21.47■■□□□ 1.03
LIME1-204ENST00000476183 INSIG1O15503 277 aa21.47■■□□□ 1.03
LIME1-204ENST00000476183 CBFA2T3O75081 653 aa21.47■■□□□ 1.03
LIME1-204ENST00000476183 PCDH8O95206 1070 aa21.47■■□□□ 1.03
LIME1-204ENST00000476183 AMPD1P23109 780 aa21.47■■□□□ 1.03
LIME1-204ENST00000476183 NUDT1P36639 197 aa21.47■■□□□ 1.03
LIME1-204ENST00000476183 ABL2P42684 1182 aa21.47■■□□□ 1.03
LIME1-204ENST00000476183 TBX2Q13207 712 aaPredicted RBP21.47■■□□□ 1.03
LIME1-204ENST00000476183 SETMARQ53H47 684 aaPredicted RBP21.47■■□□□ 1.03
LIME1-204ENST00000476183 ZNF805Q5CZA5 627 aa21.47■■□□□ 1.03
LIME1-204ENST00000476183 FBXL19Q6PCT2 694 aa21.47■■□□□ 1.03
LIME1-204ENST00000476183 SARM1Q6SZW1 724 aa21.47■■□□□ 1.03
LIME1-204ENST00000476183 TEKT4Q8WW24 435 aa21.47■■□□□ 1.03
LIME1-204ENST00000476183 KLHL32Q96NJ5 620 aa21.47■■□□□ 1.03
LIME1-204ENST00000476183 ZNHIT6Q9NWK9 470 aaKnown RBP21.47■■□□□ 1.03
LIME1-204ENST00000476183 CTTNBP2NLQ9P2B4 639 aa21.47■■□□□ 1.03
LIME1-204ENST00000476183 PCDHGB2Q9Y5G2 931 aa21.47■■□□□ 1.03
LIME1-204ENST00000476183 H3BRJ5 948 aa21.46■■□□□ 1.03
LIME1-204ENST00000476183 TLR4O00206 839 aa21.46■■□□□ 1.03
LIME1-204ENST00000476183 DFFAO00273 331 aa21.46■■□□□ 1.03
LIME1-204ENST00000476183 SPINT1O43278 529 aa21.46■■□□□ 1.03
LIME1-204ENST00000476183 IGSF6O95976 241 aa21.46■■□□□ 1.03
LIME1-204ENST00000476183 TPM1P09493 284 aa21.46■■□□□ 1.03
LIME1-204ENST00000476183 NXPH1P58417 271 aa21.46■■□□□ 1.03
LIME1-204ENST00000476183 SIM1P81133 766 aaPredicted RBP21.46■■□□□ 1.03
LIME1-204ENST00000476183 IL9RQ01113 521 aa21.46■■□□□ 1.03
LIME1-204ENST00000476183 TMEM259Q4ZIN3 620 aa21.46■■□□□ 1.03
LIME1-204ENST00000476183 GDPD4Q6W3E5 623 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms