RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 KCTD13Q8WZ19 329 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 NDRG1Q92597 394 aaKnown RBP14.39□□□□□ -0.11
ATG9A-220ENST00000475339 NAT6Q93015 286 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 PPP1R13BQ96KQ4 1090 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 HSFY1Q96LI6 401 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 IL12RB2Q99665 862 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 STRADBQ9C0K7 418 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 PDCL3Q9H2J4 239 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 CNGB3Q9NQW8 809 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 HBS1LQ9Y450 684 aaKnown RBP14.39□□□□□ -0.11
ATG9A-220ENST00000475339 CEP83Q9Y592 693 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 CSNK1G3Q9Y6M4 447 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 FOXN3O00409 490 aaPredicted RBP14.38□□□□□ -0.11
ATG9A-220ENST00000475339 AQP9O43315 295 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 MSI1O43347 362 aaKnown RBP14.38□□□□□ -0.11
ATG9A-220ENST00000475339 CSF2P04141 144 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 PNMA6AP0CW24 399 aaPredicted RBP14.38□□□□□ -0.11
ATG9A-220ENST00000475339 NME1P15531 152 aaKnown RBP14.38□□□□□ -0.11
ATG9A-220ENST00000475339 AKT2P31751 481 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 KRT9P35527 623 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 NUMBP49757 651 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 STK19P49842 368 aaPredicted RBP14.38□□□□□ -0.11
ATG9A-220ENST00000475339 KLK7P49862 253 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 ECT2LQ008S8 904 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 C1QBPQ07021 282 aaKnown RBP14.38□□□□□ -0.11
ATG9A-220ENST00000475339 MEA1Q16626 185 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 ZNF284Q2VY69 593 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 RNF219Q5W0B1 726 aaPredicted RBP14.38□□□□□ -0.11
ATG9A-220ENST00000475339 PTAR1Q7Z6K3 402 aaPredicted RBP14.38□□□□□ -0.11
ATG9A-220ENST00000475339 ABI3BPQ7Z7G0 1075 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 SLC35F3Q8IY50 421 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 CARNMT1Q8N4J0 409 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 ZNF557Q8N988 423 aaPredicted RBP14.38□□□□□ -0.11
ATG9A-220ENST00000475339 NEK11Q8NG66 645 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 LMX1AQ8TE12 382 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 SLC35F5Q8WV83 523 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 SPAG5Q96R06 1193 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 BOCQ9BWV1 1114 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 STK33Q9BYT3 514 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 HSD3B7Q9H2F3 369 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 CBX8Q9HC52 389 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 ACP6Q9NPH0 428 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 DAAM1Q9Y4D1 1078 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 LOXL2Q9Y4K0 774 aa14.38□□□□□ -0.11
ATG9A-220ENST00000475339 F8VZ95 297 aa14.37□□□□□ -0.11
ATG9A-220ENST00000475339 H3BM21 787 aa14.37□□□□□ -0.11
ATG9A-220ENST00000475339 PIK3R2O00459 728 aa14.37□□□□□ -0.11
ATG9A-220ENST00000475339 RIOK3O14730 519 aaKnown RBP14.37□□□□□ -0.11
ATG9A-220ENST00000475339 SEMA7AO75326 666 aa14.37□□□□□ -0.11
ATG9A-220ENST00000475339 FBXO21O94952 628 aa14.37□□□□□ -0.11
ATG9A-220ENST00000475339 LATS1O95835 1130 aa14.37□□□□□ -0.11
ATG9A-220ENST00000475339 SERPINC1P01008 464 aa14.37□□□□□ -0.11
ATG9A-220ENST00000475339 HNRNPA2B1P22626 353 aaKnown RBP14.37□□□□□ -0.11
ATG9A-220ENST00000475339 ETV5P41161 510 aa14.37□□□□□ -0.11
ATG9A-220ENST00000475339 ACADSBP45954 432 aa14.37□□□□□ -0.11
ATG9A-220ENST00000475339 RPIAP49247 311 aa14.37□□□□□ -0.11
ATG9A-220ENST00000475339 POLR2FP61218 127 aaKnown RBP14.37□□□□□ -0.11
ATG9A-220ENST00000475339 RPS24P62847 133 aaKnown RBP14.37□□□□□ -0.11
ATG9A-220ENST00000475339 NFKBIBQ15653 356 aa14.37□□□□□ -0.11
ATG9A-220ENST00000475339 FAM133BQ5BKY9 247 aaKnown RBP14.37□□□□□ -0.11
ATG9A-220ENST00000475339 PM20D1Q6GTS8 502 aa14.37□□□□□ -0.11
ATG9A-220ENST00000475339 PMF1Q6P1K2 205 aa14.37□□□□□ -0.11
ATG9A-220ENST00000475339 SLC47A2Q86VL8 602 aa14.37□□□□□ -0.11
ATG9A-220ENST00000475339 PASD1Q8IV76 773 aa14.37□□□□□ -0.11
ATG9A-220ENST00000475339 FAM71AQ8IYT1 594 aa14.37□□□□□ -0.11
ATG9A-220ENST00000475339 RNF139Q8WU17 664 aa14.37□□□□□ -0.11
ATG9A-220ENST00000475339 USP7Q93009 1102 aa14.37□□□□□ -0.11
ATG9A-220ENST00000475339 MYEOVQ96EZ4 313 aa14.37□□□□□ -0.11
ATG9A-220ENST00000475339 MIS12Q9H081 205 aa14.37□□□□□ -0.11
ATG9A-220ENST00000475339 GANQ9H2C0 597 aa14.37□□□□□ -0.11
ATG9A-220ENST00000475339 LRRC10BA6NIK2 292 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 D6RAR5 112 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 TMX2-CTNND1H3BSU7 103 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 TPP1O14773 563 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 SART1O43290 800 aaKnown RBP14.36□□□□□ -0.11
ATG9A-220ENST00000475339 JUNDP17535 347 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 GNLYP22749 145 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 GPD2P43304 727 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 PDCLQ13371 301 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 CDH18Q13634 790 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 IQCB1Q15051 598 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 FAM46CQ5VWP2 391 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 DPY19L2P1Q6NXN4 242 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 LUZP1Q86V48 1076 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 APCDD1Q8J025 514 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 IRGQQ8WZA9 623 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 EDEM1Q92611 657 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 BMFQ96LC9 184 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 PRICKLE1Q96MT3 831 aaPredicted RBP14.36□□□□□ -0.11
ATG9A-220ENST00000475339 GFM1Q96RP9 751 aaKnown RBP14.36□□□□□ -0.11
ATG9A-220ENST00000475339 ERGIC2Q96RQ1 377 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 NAA15Q9BXJ9 866 aaKnown RBP14.36□□□□□ -0.11
ATG9A-220ENST00000475339 SYNCQ9H7C4 482 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 NLRC4Q9NPP4 1024 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 GPR27Q9NS67 375 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 OLA1Q9NTK5 396 aaKnown RBP14.36□□□□□ -0.11
ATG9A-220ENST00000475339 RABGEF1Q9UJ41 708 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 PCDHGC3Q9UN70 934 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 SIK3Q9Y2K2 1263 aa14.36□□□□□ -0.11
ATG9A-220ENST00000475339 SCN8AQ9UQD0 1980 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms