RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 CHPFQ8IZ52 775 aa7.12□□□□□ -1.27
LIMD1-204ENST00000474665 SLC35F6Q8N357 371 aa7.12□□□□□ -1.27
LIMD1-204ENST00000474665 LZTR1Q8N653 840 aa7.12□□□□□ -1.27
LIMD1-204ENST00000474665 KDM1BQ8NB78 822 aa7.12□□□□□ -1.27
LIMD1-204ENST00000474665 DEFB124Q8NES8 71 aa7.12□□□□□ -1.27
LIMD1-204ENST00000474665 TRIM58Q8NG06 486 aa7.12□□□□□ -1.27
LIMD1-204ENST00000474665 PTPRN2Q92932 1015 aa7.12□□□□□ -1.27
LIMD1-204ENST00000474665 ACDQ96AP0 544 aa7.12□□□□□ -1.27
LIMD1-204ENST00000474665 HHIPQ96QV1 700 aa7.12□□□□□ -1.27
LIMD1-204ENST00000474665 FAM129BQ96TA1 746 aa7.12□□□□□ -1.27
LIMD1-204ENST00000474665 LGMNQ99538 433 aa7.12□□□□□ -1.27
LIMD1-204ENST00000474665 EDEM2Q9BV94 578 aa7.12□□□□□ -1.27
LIMD1-204ENST00000474665 C2orf49Q9BVC5 232 aaPredicted RBP7.12□□□□□ -1.27
LIMD1-204ENST00000474665 OSBPL8Q9BZF1 889 aa7.12□□□□□ -1.27
LIMD1-204ENST00000474665 MKRN2Q9H000 416 aaKnown RBP7.12□□□□□ -1.27
LIMD1-204ENST00000474665 SLC6A17Q9H1V8 727 aa7.12□□□□□ -1.27
LIMD1-204ENST00000474665 PRSS16Q9NQE7 514 aa7.12□□□□□ -1.27
LIMD1-204ENST00000474665 IPO11Q9UI26 975 aaKnown RBP7.12□□□□□ -1.27
LIMD1-204ENST00000474665 R3HDM2Q9Y2K5 976 aaKnown RBP7.12□□□□□ -1.27
LIMD1-204ENST00000474665 RAXQ9Y2V3 346 aa7.12□□□□□ -1.27
LIMD1-204ENST00000474665 FCF1Q9Y324 198 aaKnown RBP7.12□□□□□ -1.27
LIMD1-204ENST00000474665 LRRK1Q38SD2 2015 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 GOLGA4Q13439 2230 aaKnown RBP7.11□□□□□ -1.27
LIMD1-204ENST00000474665 CXorf51AA0A1B0GTR3 108 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 ARHGAP42A6NI28 874 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 NPC1O15118 1278 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 MAP3K13O43283 966 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 SIN3BO75182 1162 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 TMCC1O94876 653 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 EPN2O95208 641 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 EPHX1P07099 455 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 CTSLP07711 333 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 SRPRAP08240 638 aaKnown RBP7.11□□□□□ -1.27
LIMD1-204ENST00000474665 HOXB2P14652 356 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 GABRG2P18507 467 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 HOXA6P31267 233 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 CXCR5P32302 372 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 ETFBP38117 255 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 GARSP41250 739 aaKnown RBP7.11□□□□□ -1.27
LIMD1-204ENST00000474665 PXNP49023 591 aaPredicted RBP7.11□□□□□ -1.27
LIMD1-204ENST00000474665 METAP1P53582 386 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 COPS2P61201 443 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 DYNLT1P63172 113 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 SLC10A7Q0GE19 358 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 RPS6KA1Q15418 735 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 HSF5Q4G112 596 aaPredicted RBP7.11□□□□□ -1.27
LIMD1-204ENST00000474665 FNDC3BQ53EP0 1204 aaKnown RBP7.11□□□□□ -1.27
LIMD1-204ENST00000474665 HS1BP3Q53T59 392 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 ZFYVE27Q5T4F4 411 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 SERPINA13PQ6UXR4 307 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 Q6ZVU0 165 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 KBTBD6Q86V97 674 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 RASSF3Q86WH2 238 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 RFX6Q8HWS3 928 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 CCDC117Q8IWD4 279 aaPredicted RBP7.11□□□□□ -1.27
LIMD1-204ENST00000474665 STK40Q8N2I9 435 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 PGBD5Q8N414 524 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 CHST14Q8NCH0 376 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 OR2A12Q8NGT7 310 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 ACTL9Q8TC94 416 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 COG1Q8WTW3 980 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 UCMAQ8WVF2 138 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 MAML1Q92585 1016 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 EXOC4Q96A65 974 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 RBM41Q96IZ5 413 aaKnown RBP7.11□□□□□ -1.27
LIMD1-204ENST00000474665 MRGPRX1Q96LB2 322 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 TSGA13Q96PP4 275 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 FAM118BQ9BPY3 351 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 TNKS2Q9H2K2 1166 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 C10orf88Q9H8K7 445 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 CD93Q9NPY3 652 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 LHX3Q9UBR4 397 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 EBF1Q9UH73 591 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 SARDHQ9UL12 918 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 PLA2G4CQ9UP65 541 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 EFR3BQ9Y2G0 817 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.11□□□□□ -1.27
LIMD1-204ENST00000474665 HEY1Q9Y5J3 304 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 ZNF462Q96JM2 2506 aa7.11□□□□□ -1.27
LIMD1-204ENST00000474665 EDDM13A0A1B0GTR0 161 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 TTC24A2A3L6 582 aaPredicted RBP7.1□□□□□ -1.27
LIMD1-204ENST00000474665 KCNK3O14649 394 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 APOL1O14791 398 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 INSIG1O15503 277 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 ATG13O75143 517 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 NDUFV2P19404 249 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 CR2P20023 1033 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 CSRP1P21291 193 aaKnown RBP7.1□□□□□ -1.27
LIMD1-204ENST00000474665 GKP32189 559 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 SERPINB6P35237 376 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 MPLP40238 635 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 CLCN6P51797 869 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 DGKEP52429 567 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 IL10RBQ08334 325 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 SLC20A2Q08357 652 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 PPIDQ08752 370 aaKnown RBP7.1□□□□□ -1.27
LIMD1-204ENST00000474665 ZBTB17Q13105 803 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 TFDP2Q14188 446 aa7.1□□□□□ -1.27
LIMD1-204ENST00000474665 PRKD1Q15139 912 aaPredicted RBP7.1□□□□□ -1.27
LIMD1-204ENST00000474665 NOMO1Q15155 1222 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms