RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 CYP1A2P05177 515 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 FGF2P09038 288 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 ZNF8P17098 575 aaPredicted RBP3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 MYF6P23409 242 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 CCR5P51681 352 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 CDH12P55289 794 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 P2RX3P56373 397 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 PPATQ06203 517 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 ST3GAL1Q11201 340 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 GPR18Q14330 331 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 GPR68Q15743 365 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 BAK1Q16611 211 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 DUSP6Q16828 381 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 ZNF260Q3ZCT1 412 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 SH2D4BQ5SQS7 431 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 WASHC2DQ5SRD0 308 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 DCAF12L2Q5VW00 463 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 ATG9BQ674R7 924 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 C9orf47Q6ZRZ4 202 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 PRSS45Q7RTY3 260 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 RBFAQ8N0V3 343 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 HORMAD2Q8N7B1 307 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 TSPYL6Q8N831 410 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 TEX45Q8NA69 505 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 OR4N2Q8NGD1 307 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 TBC1D22AQ8WUA7 517 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 RNF183Q96D59 192 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 GFM1Q96RP9 751 aaKnown RBP3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 FUZQ9BT04 418 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 MMTAG2Q9BU76 263 aaKnown RBP3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 SPATS2LQ9NUQ6 558 aaKnown RBP3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 FZD10Q9ULW2 581 aa3.49□□□□□ -1.85
ECHDC1-213ENST00000474240 OR6C75A6NL08 312 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 PER2O15055 1255 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 ASAP2O43150 1006 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 CEP104O60308 925 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 IRF1P10914 325 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 GNLYP22749 145 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 HOXD3P31249 432 aaPredicted RBP3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 ARSFP54793 590 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 SELENOVP59797 346 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 EGR4Q05215 589 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 PKP1Q13835 747 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 NFIL3Q16649 462 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 KRTAP27-1Q3LI81 207 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 PLEKHO1Q53GL0 409 aaPredicted RBP3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 DENND6AQ8IWF6 608 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 CADM3Q8N126 398 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 SMRP1Q8NCR6 262 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 MCPH1Q8NEM0 835 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 UNC45AQ9H3U1 944 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 JMJD4Q9H9V9 463 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 PLAC1Q9HBJ0 212 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 IL1RAPL1Q9NZN1 696 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 SELENONQ9NZV5 590 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 WNT16Q9UBV4 365 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 PCDHGB5Q9Y5G0 923 aa3.48□□□□□ -1.85
ECHDC1-213ENST00000474240 A0A1B0GVC2 190 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 TEX22C9J3V5 150 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 MTA2O94776 668 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 HOXC6P09630 235 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 SNHG28P0DPA3 235 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 HOXB2P14652 356 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 CTPS1P17812 591 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 CD58P19256 250 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 POU1F1P28069 291 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 GABRB2P47870 512 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 RPP30P78346 268 aaKnown RBP3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 POU5F1BQ06416 359 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 FAM27E3Q08E93 113 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 ME3Q16798 604 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 FSCBQ5H9T9 825 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 ZNF766Q5HY98 468 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 EFHC1Q5JVL4 640 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 INTS11Q5TA45 600 aaKnown RBP3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 C8orf82Q6P1X6 216 aaPredicted RBP3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 C17orf99Q6UX52 265 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 MMS22LQ6ZRQ5 1243 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 FAM83HQ6ZRV2 1179 aaPredicted RBP3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 CHD1LQ86WJ1 897 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 GPSM1Q86YR5 675 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 TMTC1Q8IUR5 882 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 NAXEQ8NCW5 288 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 ENGASEQ8NFI3 743 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 IL17REQ8NFR9 667 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 CEP76Q8TAP6 659 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 HTRA1Q92743 480 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 INPP5DQ92835 1189 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 TMEM18Q96B42 140 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 LYZL4Q96KX0 146 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 EYA3Q99504 573 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 TMEM204Q9BSN7 226 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 DCLK3Q9C098 648 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 LMAN2LQ9H0V9 348 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 CDT1Q9H211 546 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 EBF3Q9H4W6 596 aa3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 MRPL44Q9H9J2 332 aaKnown RBP3.47□□□□□ -1.85
ECHDC1-213ENST00000474240 VEZTQ9HBM0 779 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms