RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 RFX8Q6ZV50 586 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 CYP4V2Q6ZWL3 525 aaPredicted RBP11.37□□□□□ -0.59
CKS1B-206ENST00000474215 IQCHQ86VS3 1027 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 HORMAD1Q86X24 394 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 OR6K2Q8NGY2 324 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 RHBDD1Q8TEB9 315 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 CNTNAP3BQ96NU0 1288 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 KCTD15Q96SI1 283 aaPredicted RBP11.37□□□□□ -0.59
CKS1B-206ENST00000474215 CNTNAP3Q9BZ76 1288 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 THAP2Q9H0W7 228 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 LRRC19Q9H756 370 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 WASF3Q9UPY6 502 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 ASCC3Q8N3C0 2202 aaKnown RBP11.37□□□□□ -0.59
CKS1B-206ENST00000474215 CACNA1EQ15878 2313 aa11.37□□□□□ -0.59
CKS1B-206ENST00000474215 A0A1B0GTQ1 180 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 C16orf96A6NNT2 1141 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 SLC31A1O15431 190 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 AP1G1O43747 822 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 TMCC1O94876 653 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 CYP1A2P05177 515 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 ADRB3P13945 408 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 ERCC2P18074 760 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 GKP32189 559 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 EIF4A3P38919 411 aaKnown RBP11.36□□□□□ -0.59
CKS1B-206ENST00000474215 PAPOLAP51003 745 aaKnown RBP11.36□□□□□ -0.59
CKS1B-206ENST00000474215 ZNF135P52742 658 aaPredicted RBP11.36□□□□□ -0.59
CKS1B-206ENST00000474215 NXPH1P58417 271 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 RHOAP61586 193 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 OVGP1Q12889 678 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 ZNF805Q5CZA5 627 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 CCDC122Q5T0U0 273 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 ATXN7L2Q5T6C5 722 aaPredicted RBP11.36□□□□□ -0.59
CKS1B-206ENST00000474215 GLRX5Q86SX6 157 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 OR8K1Q8NGG5 319 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 KLK6Q92876 244 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 VOPP1Q96AW1 172 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 FEM1CQ96JP0 617 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 GDAP1L1Q96MZ0 367 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 ELF4Q99607 663 aaPredicted RBP11.36□□□□□ -0.59
CKS1B-206ENST00000474215 CDC6Q99741 560 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 OSBPL1AQ9BXW6 950 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 SLC39A8Q9C0K1 460 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 ERVMER34-1Q9H9K5 563 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 GDF3Q9NR23 364 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 CWC15Q9P013 229 aaKnown RBP11.36□□□□□ -0.59
CKS1B-206ENST00000474215 IP6K2Q9UHH9 426 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 MFHAS1Q9Y4C4 1052 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 FADS3Q9Y5Q0 445 aa11.36□□□□□ -0.59
CKS1B-206ENST00000474215 NYNRINQ9P2P1 1898 aaKnown RBP11.36□□□□□ -0.59
CKS1B-206ENST00000474215 ARHGAP42A6NI28 874 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 J3KR12 359 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 MAGEC1O60732 1142 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 PRAMEF11O60813 436 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 TRIM16O95361 564 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 IGSF6O95976 241 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 TOP3BO95985 862 aaKnown RBP11.35□□□□□ -0.59
CKS1B-206ENST00000474215 UGT2B4P06133 528 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 PRLRP16471 622 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 IL1R2P27930 398 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 GRK6P43250 576 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 ARRB1P49407 418 aaPredicted RBP11.35□□□□□ -0.59
CKS1B-206ENST00000474215 RPS21P63220 83 aaKnown RBP11.35□□□□□ -0.59
CKS1B-206ENST00000474215 IL9RQ01113 521 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 RAD51Q06609 339 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 TRIM14Q14142 442 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 CYTH1Q15438 398 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 TMEM259Q4ZIN3 620 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 AFMIDQ63HM1 303 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 SEL1L3Q68CR1 1132 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 GDPD4Q6W3E5 623 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 PARS2Q7L3T8 475 aaKnown RBP11.35□□□□□ -0.59
CKS1B-206ENST00000474215 SPATS2Q86XZ4 545 aaKnown RBP11.35□□□□□ -0.59
CKS1B-206ENST00000474215 NIPA2Q8N8Q9 360 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 NETO2Q8NC67 525 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 BAHD1Q8TBE0 780 aaPredicted RBP11.35□□□□□ -0.59
CKS1B-206ENST00000474215 RAB7BQ96AH8 199 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 KLHDC7BQ96G42 594 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 CELF6Q96J87 481 aaKnown RBP11.35□□□□□ -0.59
CKS1B-206ENST00000474215 KLHL32Q96NJ5 620 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 DNAJC7Q99615 494 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 NUP85Q9BW27 656 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 ZWILCHQ9H900 591 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 PDFQ9HBH1 243 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 UBA2Q9UBT2 640 aaPredicted RBP11.35□□□□□ -0.59
CKS1B-206ENST00000474215 ANAPC7Q9UJX3 599 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 ZFR2Q9UPR6 939 aaKnown RBP11.35□□□□□ -0.59
CKS1B-206ENST00000474215 BTBD3Q9Y2F9 522 aa11.35□□□□□ -0.59
CKS1B-206ENST00000474215 H3BRJ5 948 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 MYO1FO00160 1098 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 YKT6O15498 198 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 TSPAN6O43657 245 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 RARAP10276 462 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 TCF4P15884 667 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 SPINK2P20155 84 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 HNRNPA2B1P22626 353 aaKnown RBP11.34□□□□□ -0.59
CKS1B-206ENST00000474215 AKT2P31751 481 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 ARL4AP40617 200 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 RXRGP48443 463 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 SGCGQ13326 291 aa11.34□□□□□ -0.59
CKS1B-206ENST00000474215 DPYSQ14117 519 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms