RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 VPS28Q9UK41 221 aa20.63■□□□□ 0.89
APP-215ENST00000474136 SYNJ2BP-COX16A0A087WUM0 186 aa20.62■□□□□ 0.89
APP-215ENST00000474136 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.62■□□□□ 0.89
APP-215ENST00000474136 CDRT15L2A8MXV6 281 aa20.62■□□□□ 0.89
APP-215ENST00000474136 F8VZ95 297 aa20.62■□□□□ 0.89
APP-215ENST00000474136 K7ERQ8 282 aa20.62■□□□□ 0.89
APP-215ENST00000474136 SRCP12931 536 aa20.62■□□□□ 0.89
APP-215ENST00000474136 FERP16591 822 aa20.62■□□□□ 0.89
APP-215ENST00000474136 CHRNA3P32297 505 aa20.62■□□□□ 0.89
APP-215ENST00000474136 SOX5P35711 763 aa20.62■□□□□ 0.89
APP-215ENST00000474136 CSRP3P50461 194 aa20.62■□□□□ 0.89
APP-215ENST00000474136 OXCT1P55809 520 aa20.62■□□□□ 0.89
APP-215ENST00000474136 HNRNPKP61978 463 aaKnown RBP eCLIP20.62■□□□□ 0.89
APP-215ENST00000474136 CDK17Q00537 523 aa20.62■□□□□ 0.89
APP-215ENST00000474136 ZNF177Q13360 481 aaPredicted RBP20.62■□□□□ 0.89
APP-215ENST00000474136 FGL2Q14314 439 aa20.62■□□□□ 0.89
APP-215ENST00000474136 TAF5Q15542 800 aa20.62■□□□□ 0.89
APP-215ENST00000474136 ARHGAP44Q17R89 818 aa20.62■□□□□ 0.89
APP-215ENST00000474136 TTC39BQ5VTQ0 682 aaPredicted RBP20.62■□□□□ 0.89
APP-215ENST00000474136 LRRC8AQ8IWT6 810 aa20.62■□□□□ 0.89
APP-215ENST00000474136 CHST14Q8NCH0 376 aa20.62■□□□□ 0.89
APP-215ENST00000474136 SHC3Q92529 594 aa20.62■□□□□ 0.89
APP-215ENST00000474136 TRIM44Q96DX7 344 aaPredicted RBP20.62■□□□□ 0.89
APP-215ENST00000474136 POPDC2Q9HBU9 364 aa20.62■□□□□ 0.89
APP-215ENST00000474136 COX16Q9P0S2 106 aa20.62■□□□□ 0.89
APP-215ENST00000474136 SLC12A6Q9UHW9 1150 aa20.62■□□□□ 0.89
APP-215ENST00000474136 KLF15Q9UIH9 416 aa20.62■□□□□ 0.89
APP-215ENST00000474136 PCDHGA8Q9Y5G5 932 aa20.62■□□□□ 0.89
APP-215ENST00000474136 COL27A1Q8IZC6 1860 aaPredicted RBP20.62■□□□□ 0.89
APP-215ENST00000474136 POM121BA6NF01 834 aa20.61■□□□□ 0.89
APP-215ENST00000474136 LRRC53A6NM62 1247 aa20.61■□□□□ 0.89
APP-215ENST00000474136 A6NNZ2 444 aa20.61■□□□□ 0.89
APP-215ENST00000474136 E5RJQ4 531 aa20.61■□□□□ 0.89
APP-215ENST00000474136 SNAP91O60641 907 aa20.61■□□□□ 0.89
APP-215ENST00000474136 ACADSBP45954 432 aa20.61■□□□□ 0.89
APP-215ENST00000474136 APBA1Q02410 837 aa20.61■□□□□ 0.89
APP-215ENST00000474136 DEFB133Q30KQ1 61 aa20.61■□□□□ 0.89
APP-215ENST00000474136 TMEM259Q4ZIN3 620 aa20.61■□□□□ 0.89
APP-215ENST00000474136 PERM1Q5SV97 790 aa20.61■□□□□ 0.89
APP-215ENST00000474136 ZCCHC8Q6NZY4 707 aaKnown RBP20.61■□□□□ 0.89
APP-215ENST00000474136 GJB7Q6PEY0 223 aa20.61■□□□□ 0.89
APP-215ENST00000474136 OR2A12Q8NGT7 310 aa20.61■□□□□ 0.89
APP-215ENST00000474136 CCDC97Q96F63 343 aaPredicted RBP20.61■□□□□ 0.89
APP-215ENST00000474136 KREMEN1Q96MU8 473 aa20.61■□□□□ 0.89
APP-215ENST00000474136 SLC4A5Q9BY07 1137 aa20.61■□□□□ 0.89
APP-215ENST00000474136 FAM204AQ9H8W3 233 aa20.61■□□□□ 0.89
APP-215ENST00000474136 GPR27Q9NS67 375 aa20.61■□□□□ 0.89
APP-215ENST00000474136 WDR70Q9NW82 654 aa20.61■□□□□ 0.89
APP-215ENST00000474136 VANGL2Q9ULK5 521 aa20.61■□□□□ 0.89
APP-215ENST00000474136 RAD51BO15315 384 aa20.6■□□□□ 0.89
APP-215ENST00000474136 EFSO43281 561 aa20.6■□□□□ 0.89
APP-215ENST00000474136 TNFSF15O95150 251 aa20.6■□□□□ 0.89
APP-215ENST00000474136 CSF2P04141 144 aa20.6■□□□□ 0.89
APP-215ENST00000474136 NME1P15531 152 aaKnown RBP20.6■□□□□ 0.89
APP-215ENST00000474136 DEKP35659 375 aaKnown RBP20.6■□□□□ 0.89
APP-215ENST00000474136 YWHAZP63104 245 aaKnown RBP20.6■□□□□ 0.89
APP-215ENST00000474136 MAPK8IP2Q13387 824 aaPredicted RBP20.6■□□□□ 0.89
APP-215ENST00000474136 AUHQ13825 339 aaKnown RBP20.6■□□□□ 0.89
APP-215ENST00000474136 ASIC2Q16515 512 aa20.6■□□□□ 0.89
APP-215ENST00000474136 ARL13BQ3SXY8 428 aa20.6■□□□□ 0.89
APP-215ENST00000474136 RBM44Q6ZP01 1051 aaKnown RBP20.6■□□□□ 0.89
APP-215ENST00000474136 C14orf80Q86SX3 495 aa20.6■□□□□ 0.89
APP-215ENST00000474136 TMTC1Q8IUR5 882 aa20.6■□□□□ 0.89
APP-215ENST00000474136 FAM71AQ8IYT1 594 aa20.6■□□□□ 0.89
APP-215ENST00000474136 GRIN3AQ8TCU5 1115 aa20.6■□□□□ 0.89
APP-215ENST00000474136 RNF34Q969K3 372 aa20.6■□□□□ 0.89
APP-215ENST00000474136 PSMB7Q99436 277 aa20.6■□□□□ 0.89
APP-215ENST00000474136 TRIM62Q9BVG3 475 aa20.6■□□□□ 0.89
APP-215ENST00000474136 DYRK4Q9NR20 520 aa20.6■□□□□ 0.89
APP-215ENST00000474136 IL17BQ9UHF5 180 aa20.6■□□□□ 0.89
APP-215ENST00000474136 CNTN6Q9UQ52 1028 aa20.6■□□□□ 0.89
APP-215ENST00000474136 HS3ST2Q9Y278 367 aa20.6■□□□□ 0.89
APP-215ENST00000474136 PTPN13Q12923 2485 aa20.6■□□□□ 0.89
APP-215ENST00000474136 COL12A1Q99715 3063 aa20.6■□□□□ 0.89
APP-215ENST00000474136 KIF26BQ2KJY2 2108 aa20.59■□□□□ 0.89
APP-215ENST00000474136 EME2A4GXA9 379 aaPredicted RBP20.59■□□□□ 0.89
APP-215ENST00000474136 FOXN3O00409 490 aaPredicted RBP20.59■□□□□ 0.89
APP-215ENST00000474136 SMAD6O43541 496 aaKnown RBP20.59■□□□□ 0.89
APP-215ENST00000474136 SERPING1P05155 500 aa20.59■□□□□ 0.89
APP-215ENST00000474136 RRM1P23921 792 aa20.59■□□□□ 0.89
APP-215ENST00000474136 NFKB2Q00653 900 aa20.59■□□□□ 0.89
APP-215ENST00000474136 MEA1Q16626 185 aa20.59■□□□□ 0.89
APP-215ENST00000474136 ARSIQ5FYB1 569 aa20.59■□□□□ 0.89
APP-215ENST00000474136 TPRG1LQ5T0D9 272 aa20.59■□□□□ 0.89
APP-215ENST00000474136 ERN2Q76MJ5 926 aaKnown RBP20.59■□□□□ 0.89
APP-215ENST00000474136 ATP11CQ8NB49 1132 aa20.59■□□□□ 0.89
APP-215ENST00000474136 TMIEQ8NEW7 156 aa20.59■□□□□ 0.89
APP-215ENST00000474136 BAG1Q99933 345 aaPredicted RBP20.59■□□□□ 0.89
APP-215ENST00000474136 FAM117AQ9C073 453 aa20.59■□□□□ 0.89
APP-215ENST00000474136 MUC3BQ9H195 1237 aa20.59■□□□□ 0.89
APP-215ENST00000474136 DDIT4Q9NX09 232 aa20.59■□□□□ 0.89
APP-215ENST00000474136 FARP1Q9Y4F1 1045 aaPredicted RBP20.59■□□□□ 0.89
APP-215ENST00000474136 HEMK1Q9Y5R4 338 aaPredicted RBP20.59■□□□□ 0.89
APP-215ENST00000474136 HS3ST3A1Q9Y663 406 aa20.59■□□□□ 0.89
APP-215ENST00000474136 BOD1L1Q8NFC6 3051 aa20.59■□□□□ 0.89
APP-215ENST00000474136 SPTY2D1-AS1A0A0U1RR47 76 aa20.58■□□□□ 0.89
APP-215ENST00000474136 MUSKO15146 869 aa20.58■□□□□ 0.89
APP-215ENST00000474136 AQP9O43315 295 aa20.58■□□□□ 0.89
APP-215ENST00000474136 PAK4O96013 591 aaPredicted RBP20.58■□□□□ 0.89
APP-215ENST00000474136 FECHP22830 423 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms