RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 IGHV4-34P06331 123 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 MAT2AP31153 395 aaKnown RBP14.44□□□□□ -0.1
VAMP4-203ENST00000474047 SERPINB6P35237 376 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 NEK3P51956 506 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 PDK2Q15119 407 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 AGBL4Q5VU57 503 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 PAF1Q8N7H5 531 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 HDAC8Q9BY41 377 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 TM9SF3Q9HD45 589 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 SPTBN4Q9H254 2564 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 CEP250Q9BV73 2442 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 ADAMTS9Q9P2N4 1935 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 GOLGA6L6A8MZA4 724 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 NEMP1O14524 444 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 CDX4O14627 284 aaPredicted RBP14.44□□□□□ -0.1
VAMP4-203ENST00000474047 OPHN1O60890 802 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 UGT2B4P06133 528 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 ITGB7P26010 798 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 GKP32189 559 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 MAN1A1P33908 653 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 C21orf59P57076 290 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 SLC45A4Q5BKX6 768 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 IL27RAQ6UWB1 636 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 TMTC1Q8IUR5 882 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 MINDY1Q8N5J2 469 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 NPWQ8N729 165 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 NSMCE1Q8WV22 266 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 SERAC1Q96JX3 654 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 CINPQ9BW66 212 aaPredicted RBP14.44□□□□□ -0.1
VAMP4-203ENST00000474047 OSBPL1AQ9BXW6 950 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 PREBQ9HCU5 417 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 KLHL11Q9NVR0 708 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 RCOR3Q9P2K3 495 aaPredicted RBP14.44□□□□□ -0.1
VAMP4-203ENST00000474047 IPO11Q9UI26 975 aaKnown RBP14.44□□□□□ -0.1
VAMP4-203ENST00000474047 A0A1B0GVT2 93 aa14.43□□□□□ -0.1
VAMP4-203ENST00000474047 RNGTTO60942 597 aaKnown RBP14.43□□□□□ -0.1
VAMP4-203ENST00000474047 TNNT1P13805 278 aa14.43□□□□□ -0.1
VAMP4-203ENST00000474047 XPAP23025 273 aaPredicted RBP14.43□□□□□ -0.1
VAMP4-203ENST00000474047 NUDT1P36639 197 aa14.43□□□□□ -0.1
VAMP4-203ENST00000474047 TAS2R40P59535 323 aa14.43□□□□□ -0.1
VAMP4-203ENST00000474047 RACK1P63244 317 aaKnown RBP14.43□□□□□ -0.1
VAMP4-203ENST00000474047 IL10RBQ08334 325 aa14.43□□□□□ -0.1
VAMP4-203ENST00000474047 GRIK2Q13002 908 aa14.43□□□□□ -0.1
VAMP4-203ENST00000474047 MMRN1Q13201 1228 aa14.43□□□□□ -0.1
VAMP4-203ENST00000474047 CYTH1Q15438 398 aa14.43□□□□□ -0.1
VAMP4-203ENST00000474047 ATP13A4Q4VNC1 1196 aa14.43□□□□□ -0.1
VAMP4-203ENST00000474047 SETMARQ53H47 684 aaPredicted RBP14.43□□□□□ -0.1
VAMP4-203ENST00000474047 ZNF805Q5CZA5 627 aa14.43□□□□□ -0.1
VAMP4-203ENST00000474047 CFAP58Q5T655 872 aa14.43□□□□□ -0.1
VAMP4-203ENST00000474047 PIP5KL1Q5T9C9 394 aa14.43□□□□□ -0.1
VAMP4-203ENST00000474047 AFMIDQ63HM1 303 aa14.43□□□□□ -0.1
VAMP4-203ENST00000474047 GDPD4Q6W3E5 623 aa14.43□□□□□ -0.1
VAMP4-203ENST00000474047 CPNE8Q86YQ8 564 aa14.43□□□□□ -0.1
VAMP4-203ENST00000474047 ARHGAP12Q8IWW6 846 aa14.43□□□□□ -0.1
VAMP4-203ENST00000474047 EXOC2Q96KP1 924 aa14.43□□□□□ -0.1
VAMP4-203ENST00000474047 KLHL32Q96NJ5 620 aa14.43□□□□□ -0.1
VAMP4-203ENST00000474047 MFHAS1Q9Y4C4 1052 aa14.43□□□□□ -0.1
VAMP4-203ENST00000474047 PCDHA13Q9Y5I0 950 aa14.43□□□□□ -0.1
VAMP4-203ENST00000474047 CER1O95813 267 aa14.42□□□□□ -0.1
VAMP4-203ENST00000474047 ADRB3P13945 408 aa14.42□□□□□ -0.1
VAMP4-203ENST00000474047 GRIA4P48058 902 aa14.42□□□□□ -0.1
VAMP4-203ENST00000474047 PPP2CBP62714 309 aa14.42□□□□□ -0.1
VAMP4-203ENST00000474047 PPP2CAP67775 309 aa14.42□□□□□ -0.1
VAMP4-203ENST00000474047 RFTN1Q14699 578 aaPredicted RBP14.42□□□□□ -0.1
VAMP4-203ENST00000474047 GRM3Q14832 879 aa14.42□□□□□ -0.1
VAMP4-203ENST00000474047 NEK5Q6P3R8 708 aa14.42□□□□□ -0.1
VAMP4-203ENST00000474047 ERMP1Q7Z2K6 904 aa14.42□□□□□ -0.1
VAMP4-203ENST00000474047 TTC7BQ86TV6 843 aa14.42□□□□□ -0.1
VAMP4-203ENST00000474047 TRIM69Q86WT6 500 aa14.42□□□□□ -0.1
VAMP4-203ENST00000474047 BBS5Q8N3I7 341 aa14.42□□□□□ -0.1
VAMP4-203ENST00000474047 ATPAF2Q8N5M1 289 aa14.42□□□□□ -0.1
VAMP4-203ENST00000474047 SPC24Q8NBT2 197 aa14.42□□□□□ -0.1
VAMP4-203ENST00000474047 OR2I1PQ8NGU4 316 aa14.42□□□□□ -0.1
VAMP4-203ENST00000474047 C1orf216Q8TAB5 229 aa14.42□□□□□ -0.1
VAMP4-203ENST00000474047 FAM131CQ96AQ9 280 aa14.42□□□□□ -0.1
VAMP4-203ENST00000474047 FEM1CQ96JP0 617 aa14.42□□□□□ -0.1
VAMP4-203ENST00000474047 PDFQ9HBH1 243 aa14.42□□□□□ -0.1
VAMP4-203ENST00000474047 ETNK2Q9NVF9 386 aa14.42□□□□□ -0.1
VAMP4-203ENST00000474047 EPN1Q9Y6I3 576 aaPredicted RBP14.42□□□□□ -0.1
VAMP4-203ENST00000474047 A0A1W2PQU0 124 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 C16orf96A6NNT2 1141 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 RNF103O00237 685 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 SPOPO43791 374 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 MTA2O94776 668 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 CD48P09326 243 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 CD38P28907 300 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 SLC1A1P43005 524 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 RENBPP51606 427 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 DPYSL3Q14195 570 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 STAT4Q14765 748 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 ANKRD20A8PQ5CZ79 823 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 ARHGAP36Q6ZRI8 547 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 TSC1Q92574 1164 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 SLC6A18Q96N87 628 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 MAK16Q9BXY0 300 aaKnown RBP14.41□□□□□ -0.1
VAMP4-203ENST00000474047 GAREM1Q9H706 876 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 LHX3Q9UBR4 397 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 SEPT3Q9UH03 358 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 DMTF1Q9Y222 760 aa14.41□□□□□ -0.1
VAMP4-203ENST00000474047 ANKRD6Q9Y2G4 727 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms