RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 CD160O95971 181 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 AGTP01019 485 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 CYP17A1P05093 508 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 MMP2P08253 660 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 LAMP2P13473 410 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 HLA-FP30511 346 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 CD86P42081 329 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 PLK1P53350 603 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 SESN2P58004 480 aaPredicted RBP10.9□□□□□ -0.66
SP140-208ENST00000473711 KCNC4Q03721 635 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 TNK2Q07912 1038 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 PCSK7Q16549 785 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 PLEKHG6Q3KR16 790 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 DNAJC21Q5F1R6 531 aaKnown RBP10.9□□□□□ -0.66
SP140-208ENST00000473711 PITRM1Q5JRX3 1037 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 VITQ6UXI7 678 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 CAPN12Q6ZSI9 719 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 KDELC2Q7Z4H8 507 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 RNF135Q8IUD6 432 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 PALM2Q8IXS6 379 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 KLHDC8BQ8IXV7 354 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 YAF2Q8IY57 180 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 AGGF1Q8N302 714 aaeCLIP10.9□□□□□ -0.66
SP140-208ENST00000473711 MPP5Q8N3R9 675 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 KIAA1958Q8N8K9 716 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 DCAF4L2Q8NA75 395 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 IPMKQ8NFU5 416 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 ARRDC2Q8TBH0 407 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 IMP4Q96G21 291 aaKnown RBP10.9□□□□□ -0.66
SP140-208ENST00000473711 PPP1R2P1Q96PQ5 205 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 SEMA3CQ99985 751 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 TBL1YQ9BQ87 522 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 KXD1Q9BQD3 176 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 FICDQ9BVA6 458 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 C2orf49Q9BVC5 232 aaPredicted RBP10.9□□□□□ -0.66
SP140-208ENST00000473711 PHACTR1Q9C0D0 580 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 POLR1EQ9GZS1 481 aaKnown RBP10.9□□□□□ -0.66
SP140-208ENST00000473711 ACBD3Q9H3P7 528 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 EBF3Q9H4W6 596 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 LRRC40Q9H9A6 602 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 CASS4Q9NQ75 786 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 CD207Q9UJ71 328 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 GGA2Q9UJY4 613 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 CHMP2BQ9UQN3 213 aa10.9□□□□□ -0.66
SP140-208ENST00000473711 CHD9Q3L8U1 2897 aa10.9□□□□□ -0.67
SP140-208ENST00000473711 SDR42E2A6NKP2 422 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 H3BQ06 376 aaPredicted RBP10.89□□□□□ -0.67
SP140-208ENST00000473711 K7ERQ8 282 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 AGPSO00116 658 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 TRIM24O15164 1050 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 TMCC1O94876 653 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 NFATC1O95644 943 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 ADH1CP00326 375 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 MT-CO1P00395 513 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 SHBGP04278 402 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 ADH5P11766 374 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 PABPC1P11940 636 aaKnown RBP10.89□□□□□ -0.67
SP140-208ENST00000473711 MLNP12872 115 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 TPH1P17752 444 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 MGAT1P26572 445 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 CTSOP43234 321 aaPredicted RBP10.89□□□□□ -0.67
SP140-208ENST00000473711 MAGEA3P43357 314 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 RGRP47804 291 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 SCNN1BP51168 640 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 WNT3AP56704 352 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 SKOR1P84550 965 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 CBLBQ13191 982 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 MPP3Q13368 585 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 SLC12A1Q13621 1099 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 GRM2Q14416 872 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 IHHQ14623 411 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 COL19A1Q14993 1142 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 CCDC85BQ15834 202 aaPredicted RBP10.89□□□□□ -0.67
SP140-208ENST00000473711 CCDC38Q502W7 563 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 RETSATQ6NUM9 610 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 KDELC1Q6UW63 502 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 PARM1Q6UWI2 310 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 LRIG3Q6UXM1 1119 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 LINC00523Q86TU6 105 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 MFSD6LQ8IWD5 586 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 DNAAF3Q8N9W5 541 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 TTC8Q8TAM2 541 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 ACDQ96AP0 544 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 E2F7Q96AV8 911 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 CFAP36Q96G28 342 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 EXOC2Q96KP1 924 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 MRGPRX2Q96LB1 330 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 SIGLEC10Q96LC7 697 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 TTC25Q96NG3 672 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 PSKH2Q96QS6 385 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 XPO6Q96QU8 1125 aaKnown RBP10.89□□□□□ -0.67
SP140-208ENST00000473711 RUFY1Q96T51 708 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 FAM83CQ9BQN1 747 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 WDR83Q9BRX9 315 aaKnown RBP10.89□□□□□ -0.67
SP140-208ENST00000473711 VPS37BQ9H9H4 285 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 LRRC4CQ9HCJ2 640 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 HAUS2Q9NVX0 235 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 CHD7Q9P2D1 2997 aa10.89□□□□□ -0.67
SP140-208ENST00000473711 FCF1Q9Y324 198 aaKnown RBP10.89□□□□□ -0.67
SP140-208ENST00000473711 USP15Q9Y4E8 981 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms