RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 HDDC3Q8N4P3 179 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 AADATQ8N5Z0 425 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 SUMF1Q8NBK3 374 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 TSEN2Q8NCE0 465 aaKnown RBP21.09■□□□□ 0.97
TOP3A-204ENST00000472959 CCNYQ8ND76 341 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 GRIN3AQ8TCU5 1115 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 MAML1Q92585 1016 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 P3H4Q92791 437 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 PPP1R16AQ96I34 528 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 HEMGNQ9BXL5 484 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 OSBPL1AQ9BXW6 950 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 CPEB1Q9BZB8 566 aaKnown RBP21.09■□□□□ 0.97
TOP3A-204ENST00000472959 ZDHHC6Q9H6R6 413 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 CD93Q9NPY3 652 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 HAUS2Q9NVX0 235 aa21.09■□□□□ 0.97
TOP3A-204ENST00000472959 SMG5Q9UPR3 1016 aaKnown RBP21.09■□□□□ 0.97
TOP3A-204ENST00000472959 A0A1W2PP55 124 aa21.08■□□□□ 0.97
TOP3A-204ENST00000472959 KPNA3O00505 521 aaPredicted RBP21.08■□□□□ 0.97
TOP3A-204ENST00000472959 SLC7A4O43246 635 aa21.08■□□□□ 0.97
TOP3A-204ENST00000472959 TJP3O95049 919 aa21.08■□□□□ 0.97
TOP3A-204ENST00000472959 MMP13P45452 471 aa21.08■□□□□ 0.97
TOP3A-204ENST00000472959 MAPK8P45983 427 aa21.08■□□□□ 0.97
TOP3A-204ENST00000472959 RPL6Q02878 288 aaKnown RBP21.08■□□□□ 0.97
TOP3A-204ENST00000472959 ADCY2Q08462 1091 aa21.08■□□□□ 0.97
TOP3A-204ENST00000472959 PMS2CLQ68D20 193 aa21.08■□□□□ 0.97
TOP3A-204ENST00000472959 NPNTQ6UXI9 565 aa21.08■□□□□ 0.97
TOP3A-204ENST00000472959 CCDC13Q8IYE1 715 aa21.08■□□□□ 0.97
TOP3A-204ENST00000472959 TEX26Q8N6G2 289 aa21.08■□□□□ 0.97
TOP3A-204ENST00000472959 OR6K2Q8NGY2 324 aa21.08■□□□□ 0.97
TOP3A-204ENST00000472959 FAM131CQ96AQ9 280 aa21.08■□□□□ 0.97
TOP3A-204ENST00000472959 LOXL4Q96JB6 756 aa21.08■□□□□ 0.97
TOP3A-204ENST00000472959 BTBD1Q9H0C5 482 aa21.08■□□□□ 0.97
TOP3A-204ENST00000472959 PCED1AQ9H1Q7 454 aa21.08■□□□□ 0.97
TOP3A-204ENST00000472959 DUSP15Q9H1R2 295 aaPredicted RBP21.08■□□□□ 0.97
TOP3A-204ENST00000472959 NEUROG2Q9H2A3 272 aa21.08■□□□□ 0.97
TOP3A-204ENST00000472959 DYRK4Q9NR20 520 aa21.08■□□□□ 0.97
TOP3A-204ENST00000472959 AMACRQ9UHK6 382 aa21.08■□□□□ 0.97
TOP3A-204ENST00000472959 DRD3P35462 400 aa21.07■□□□□ 0.96
TOP3A-204ENST00000472959 CCDC181Q5TID7 509 aa21.07■□□□□ 0.96
TOP3A-204ENST00000472959 LAIR1Q6GTX8 287 aa21.07■□□□□ 0.96
TOP3A-204ENST00000472959 SRLQ86TD4 932 aa21.07■□□□□ 0.96
TOP3A-204ENST00000472959 FAM124AQ86V42 546 aa21.07■□□□□ 0.96
TOP3A-204ENST00000472959 CADM4Q8NFZ8 388 aa21.07■□□□□ 0.96
TOP3A-204ENST00000472959 EXOC2Q96KP1 924 aa21.07■□□□□ 0.96
TOP3A-204ENST00000472959 TUBGCP5Q96RT8 1024 aa21.07■□□□□ 0.96
TOP3A-204ENST00000472959 LGMNQ99538 433 aa21.07■□□□□ 0.96
TOP3A-204ENST00000472959 HDAC8Q9BY41 377 aa21.07■□□□□ 0.96
TOP3A-204ENST00000472959 SERGEFQ9UGK8 458 aa21.07■□□□□ 0.96
TOP3A-204ENST00000472959 EVLQ9UI08 416 aaPredicted RBP21.07■□□□□ 0.96
TOP3A-204ENST00000472959 FANCMQ8IYD8 2048 aa21.07■□□□□ 0.96
TOP3A-204ENST00000472959 GOLGA6L9A6NEM1 432 aa21.06■□□□□ 0.96
TOP3A-204ENST00000472959 APOC4-APOC2K7ER74 178 aa21.06■□□□□ 0.96
TOP3A-204ENST00000472959 APOC2P02655 101 aa21.06■□□□□ 0.96
TOP3A-204ENST00000472959 CCNB1P14635 433 aa21.06■□□□□ 0.96
TOP3A-204ENST00000472959 PECAM1P16284 738 aaPredicted RBP21.06■□□□□ 0.96
TOP3A-204ENST00000472959 ITGB7P26010 798 aa21.06■□□□□ 0.96
TOP3A-204ENST00000472959 AP1S1P61966 158 aa21.06■□□□□ 0.96
TOP3A-204ENST00000472959 CNTN1Q12860 1018 aa21.06■□□□□ 0.96
TOP3A-204ENST00000472959 ZNF211Q13398 564 aaPredicted RBP21.06■□□□□ 0.96
TOP3A-204ENST00000472959 POM121L1PQ3SYA9 428 aa21.06■□□□□ 0.96
TOP3A-204ENST00000472959 ZNF805Q5CZA5 627 aa21.06■□□□□ 0.96
TOP3A-204ENST00000472959 RALGPS1Q5JS13 557 aa21.06■□□□□ 0.96
TOP3A-204ENST00000472959 GDPD4Q6W3E5 623 aa21.06■□□□□ 0.96
TOP3A-204ENST00000472959 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.06■□□□□ 0.96
TOP3A-204ENST00000472959 HCAR2Q8TDS4 363 aa21.06■□□□□ 0.96
TOP3A-204ENST00000472959 FOXJ1Q92949 421 aa21.06■□□□□ 0.96
TOP3A-204ENST00000472959 VOPP1Q96AW1 172 aa21.06■□□□□ 0.96
TOP3A-204ENST00000472959 MGME1Q9BQP7 344 aa21.06■□□□□ 0.96
TOP3A-204ENST00000472959 GPR174Q9BXC1 333 aa21.06■□□□□ 0.96
TOP3A-204ENST00000472959 SAE1Q9UBE0 346 aaPredicted RBP21.06■□□□□ 0.96
TOP3A-204ENST00000472959 MUSKO15146 869 aa21.05■□□□□ 0.96
TOP3A-204ENST00000472959 NEBLO76041 1014 aa21.05■□□□□ 0.96
TOP3A-204ENST00000472959 SEMA4FO95754 770 aa21.05■□□□□ 0.96
TOP3A-204ENST00000472959 CES1P23141 567 aa21.05■□□□□ 0.96
TOP3A-204ENST00000472959 GKP32189 559 aa21.05■□□□□ 0.96
TOP3A-204ENST00000472959 ACSL1P33121 698 aa21.05■□□□□ 0.96
TOP3A-204ENST00000472959 PLA2G5P39877 138 aa21.05■□□□□ 0.96
TOP3A-204ENST00000472959 RGRP47804 291 aa21.05■□□□□ 0.96
TOP3A-204ENST00000472959 METAP1P53582 386 aa21.05■□□□□ 0.96
TOP3A-204ENST00000472959 IFI35P80217 286 aaPredicted RBP21.05■□□□□ 0.96
TOP3A-204ENST00000472959 AP1B1Q10567 949 aa21.05■□□□□ 0.96
TOP3A-204ENST00000472959 XRCC4Q13426 336 aa21.05■□□□□ 0.96
TOP3A-204ENST00000472959 DCAF12L1Q5VU92 463 aa21.05■□□□□ 0.96
TOP3A-204ENST00000472959 ERN2Q76MJ5 926 aaKnown RBP21.05■□□□□ 0.96
TOP3A-204ENST00000472959 TFB1MQ8WVM0 346 aaKnown RBP21.05■□□□□ 0.96
TOP3A-204ENST00000472959 ARRDC3Q96B67 414 aa21.05■□□□□ 0.96
TOP3A-204ENST00000472959 ZNF419Q96HQ0 510 aaPredicted RBP21.05■□□□□ 0.96
TOP3A-204ENST00000472959 ZNF641Q96N77 438 aaPredicted RBP21.05■□□□□ 0.96
TOP3A-204ENST00000472959 PHOX2BQ99453 314 aa21.05■□□□□ 0.96
TOP3A-204ENST00000472959 KDM4CQ9H3R0 1056 aa21.05■□□□□ 0.96
TOP3A-204ENST00000472959 RBM22Q9NW64 420 aaKnown RBP eCLIP21.05■□□□□ 0.96
TOP3A-204ENST00000472959 TRMT1Q9NXH9 659 aaKnown RBP21.05■□□□□ 0.96
TOP3A-204ENST00000472959 DKK3Q9UBP4 350 aa21.05■□□□□ 0.96
TOP3A-204ENST00000472959 NYNRINQ9P2P1 1898 aaKnown RBP21.05■□□□□ 0.96
TOP3A-204ENST00000472959 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.04■□□□□ 0.96
TOP3A-204ENST00000472959 LRRC72A6NJI9 287 aa21.04■□□□□ 0.96
TOP3A-204ENST00000472959 HACD1B0YJ81 288 aa21.04■□□□□ 0.96
TOP3A-204ENST00000472959 INSIG1O15503 277 aa21.04■□□□□ 0.96
TOP3A-204ENST00000472959 MTSS1O43312 755 aa21.04■□□□□ 0.96
TOP3A-204ENST00000472959 KIF5CO60282 957 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms