RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ITGA2BP08514 1039 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 AKT2P31751 481 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 CCR1P32246 355 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 HNRNPKP61978 463 aaKnown RBP eCLIP9.52□□□□□ -0.89
VCL-204ENST00000472585 KRT85P78386 507 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 LRRC63Q05C16 580 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 PDCLQ13371 301 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 DEFB133Q30KQ1 61 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 TTI2Q6NXR4 508 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 ZCCHC8Q6NZY4 707 aaKnown RBP9.52□□□□□ -0.89
VCL-204ENST00000472585 ERN2Q76MJ5 926 aaKnown RBP9.52□□□□□ -0.89
VCL-204ENST00000472585 EFL1Q7Z2Z2 1120 aaKnown RBP9.52□□□□□ -0.89
VCL-204ENST00000472585 RBFAQ8N0V3 343 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 IFT43Q96FT9 208 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 TSG101Q99816 390 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 HDAC8Q9BY41 377 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 SLC17A9Q9BYT1 436 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 SIK2Q9H0K1 926 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 SLC25A18Q9H1K4 315 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 LRRC4CQ9HCJ2 640 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 SEPT10Q9P0V9 454 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 ZNF212Q9UDV6 495 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 GGT7Q9UJ14 662 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 SLC25A13Q9UJS0 675 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 FADS3Q9Y5Q0 445 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 HS3ST3A1Q9Y663 406 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 CENPEQ02224 2701 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 EME2A4GXA9 379 aaPredicted RBP9.51□□□□□ -0.89
VCL-204ENST00000472585 CLDN11O75508 207 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 ERBB2P04626 1255 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 CELA2BP08218 269 aaPredicted RBP9.51□□□□□ -0.89
VCL-204ENST00000472585 NME1P15531 152 aaKnown RBP9.51□□□□□ -0.89
VCL-204ENST00000472585 GKP32189 559 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 CDH4P55283 916 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 CDK17Q00537 523 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 NME3Q13232 169 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 C1orf61Q13536 156 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 TGIF1Q15583 401 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 RABGAP1LQ5R372 815 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 TTC39BQ5VTQ0 682 aaPredicted RBP9.51□□□□□ -0.89
VCL-204ENST00000472585 OLFML1Q6UWY5 402 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 THSD4Q6ZMP0 1018 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 FAM183BPQ6ZVS7 135 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 TRIM59Q8IWR1 403 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 ATP11CQ8NB49 1132 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 OR7D4Q8NG98 312 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 WDR48Q8TAF3 677 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 GRIN3AQ8TCU5 1115 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 GSDMAQ96QA5 445 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 MED15Q96RN5 788 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 C1QTNF2Q9BXJ5 285 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 GTPBP4Q9BZE4 634 aaKnown RBP9.51□□□□□ -0.89
VCL-204ENST00000472585 SCAND2PQ9GZW5 306 aaPredicted RBP9.51□□□□□ -0.89
VCL-204ENST00000472585 CLPBQ9H078 707 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 INTS2Q9H0H0 1204 aaKnown RBP9.51□□□□□ -0.89
VCL-204ENST00000472585 SYNDIG1Q9H7V2 258 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 FAM204AQ9H8W3 233 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 UBE2TQ9NPD8 197 aaPredicted RBP9.51□□□□□ -0.89
VCL-204ENST00000472585 PIGVQ9NUD9 493 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 MPP6Q9NZW5 540 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 SLC12A6Q9UHW9 1150 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 AJAP1Q9UKB5 411 aaPredicted RBP9.51□□□□□ -0.89
VCL-204ENST00000472585 MAN2B2Q9Y2E5 1009 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 ICE1Q9Y2F5 2266 aa9.51□□□□□ -0.89
VCL-204ENST00000472585 TRPM6Q9BX84 2022 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 IGLON5A6NGN9 336 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 A6NNZ2 444 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 H3BM21 787 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 P4HA2O15460 535 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 AQP9O43315 295 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 THAP12O43422 761 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 SLC2A3P11169 496 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 KRT5P13647 590 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 ITIH2P19823 946 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 SLC5A2P31639 672 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 ABL2P42684 1182 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 RPIAP49247 311 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 CXCR3P49682 368 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 OXCT1P55809 520 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 PFN3P60673 137 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 PDE1CQ14123 709 aaPredicted RBP9.5□□□□□ -0.89
VCL-204ENST00000472585 SPIDRQ14159 915 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 NR0B2Q15466 257 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 MEA1Q16626 185 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 TBR1Q16650 682 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 MANEAQ5SRI9 462 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 KYAT3Q6YP21 454 aaKnown RBP9.5□□□□□ -0.89
VCL-204ENST00000472585 PTAR1Q7Z6K3 402 aaPredicted RBP9.5□□□□□ -0.89
VCL-204ENST00000472585 B3GNT8Q7Z7M8 397 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 PTRH1Q86Y79 214 aaKnown RBP9.5□□□□□ -0.89
VCL-204ENST00000472585 DCP2Q8IU60 420 aaKnown RBP9.5□□□□□ -0.89
VCL-204ENST00000472585 PASD1Q8IV76 773 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 SLC35F3Q8IY50 421 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 FAM26EQ8N5C1 309 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 TTC13Q8NBP0 860 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 LMX1AQ8TE12 382 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 GLMNQ92990 594 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 RNF34Q969K3 372 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 NT5C3BQ969T7 300 aa9.5□□□□□ -0.89
VCL-204ENST00000472585 FUBP1Q96AE4 644 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms