RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 TFDP3Q5H9I0 405 aa17.49■□□□□ 0.39
PKD1-208ENST00000472577 ZNF776Q68DI1 518 aaPredicted RBP17.49■□□□□ 0.39
PKD1-208ENST00000472577 AADACL2Q6P093 401 aa17.49■□□□□ 0.39
PKD1-208ENST00000472577 NPNTQ6UXI9 565 aa17.49■□□□□ 0.39
PKD1-208ENST00000472577 CYP2U1Q7Z449 544 aa17.49■□□□□ 0.39
PKD1-208ENST00000472577 MMAAQ8IVH4 418 aaKnown RBP17.49■□□□□ 0.39
PKD1-208ENST00000472577 ATPAF2Q8N5M1 289 aa17.49■□□□□ 0.39
PKD1-208ENST00000472577 CHST14Q8NCH0 376 aa17.49■□□□□ 0.39
PKD1-208ENST00000472577 CASKIN2Q8WXE0 1202 aa17.49■□□□□ 0.39
PKD1-208ENST00000472577 ISG20Q96AZ6 181 aaKnown RBP17.49■□□□□ 0.39
PKD1-208ENST00000472577 HES6Q96HZ4 224 aa17.49■□□□□ 0.39
PKD1-208ENST00000472577 HERPUD2Q9BSE4 406 aa17.49■□□□□ 0.39
PKD1-208ENST00000472577 TM6SF2Q9BZW4 377 aa17.49■□□□□ 0.39
PKD1-208ENST00000472577 PYCARDQ9ULZ3 195 aa17.49■□□□□ 0.39
PKD1-208ENST00000472577 AKAP13Q12802 2813 aa17.49■□□□□ 0.39
PKD1-208ENST00000472577 ASPMQ8IZT6 3477 aa17.48■□□□□ 0.39
PKD1-208ENST00000472577 MCF2LO15068 1137 aa17.48■□□□□ 0.39
PKD1-208ENST00000472577 CST8O60676 142 aa17.48■□□□□ 0.39
PKD1-208ENST00000472577 PEX11BO96011 259 aa17.48■□□□□ 0.39
PKD1-208ENST00000472577 PROS1P07225 676 aa17.48■□□□□ 0.39
PKD1-208ENST00000472577 PYGMP11217 842 aa17.48■□□□□ 0.39
PKD1-208ENST00000472577 P2RY2P41231 377 aa17.48■□□□□ 0.39
PKD1-208ENST00000472577 GARSP41250 739 aaKnown RBP17.48■□□□□ 0.39
PKD1-208ENST00000472577 DNA2P51530 1060 aa17.48■□□□□ 0.39
PKD1-208ENST00000472577 CST6Q15828 149 aa17.48■□□□□ 0.39
PKD1-208ENST00000472577 PPP2R5EQ16537 467 aa17.48■□□□□ 0.39
PKD1-208ENST00000472577 CARD16Q5EG05 197 aa17.48■□□□□ 0.39
PKD1-208ENST00000472577 KAZNQ674X7 775 aa17.48■□□□□ 0.39
PKD1-208ENST00000472577 DPY19L3Q6ZPD9 716 aa17.48■□□□□ 0.39
PKD1-208ENST00000472577 METTL3Q86U44 580 aaKnown RBP17.48■□□□□ 0.39
PKD1-208ENST00000472577 LRRN4Q8WUT4 740 aa17.48■□□□□ 0.39
PKD1-208ENST00000472577 OR8D1Q8WZ84 308 aa17.48■□□□□ 0.39
PKD1-208ENST00000472577 TMEM121BQ9BXQ6 578 aaPredicted RBP17.48■□□□□ 0.39
PKD1-208ENST00000472577 USP36Q9P275 1121 aaKnown RBP17.48■□□□□ 0.39
PKD1-208ENST00000472577 LHX3Q9UBR4 397 aa17.48■□□□□ 0.39
PKD1-208ENST00000472577 SARDHQ9UL12 918 aa17.48■□□□□ 0.39
PKD1-208ENST00000472577 CYP8B1Q9UNU6 501 aa17.48■□□□□ 0.39
PKD1-208ENST00000472577 HEY1Q9Y5J3 304 aa17.48■□□□□ 0.39
PKD1-208ENST00000472577 RNF103O00237 685 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 KHNYNO15037 678 aaKnown RBP17.47■□□□□ 0.39
PKD1-208ENST00000472577 ALOX15BO15296 676 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 RNASEH1O60930 286 aaKnown RBP17.47■□□□□ 0.39
PKD1-208ENST00000472577 GSRP00390 522 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 CTSLP07711 333 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 ZFXP17010 805 aaPredicted RBP17.47■□□□□ 0.39
PKD1-208ENST00000472577 CHRNA3P32297 505 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 RECQLP46063 649 aaPredicted RBP17.47■□□□□ 0.39
PKD1-208ENST00000472577 PSMD8P48556 350 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 DHPSP49366 369 aaPredicted RBP17.47■□□□□ 0.39
PKD1-208ENST00000472577 CCNHP51946 323 aaPredicted RBP17.47■□□□□ 0.39
PKD1-208ENST00000472577 METAP1P53582 386 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 COPS2P61201 443 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 RHOAP61586 193 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 IRX4P78413 519 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 SLC10A7Q0GE19 358 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 ZNF211Q13398 564 aaPredicted RBP17.47■□□□□ 0.39
PKD1-208ENST00000472577 TFDP2Q14188 446 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 ATXN7L2Q5T6C5 722 aaPredicted RBP17.47■□□□□ 0.39
PKD1-208ENST00000472577 MEI1Q5TIA1 1274 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 DCAF12L1Q5VU92 463 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 UNQ6494/PRO21346Q6UXR6 183 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 ARMCX6Q7L4S7 300 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 PLPP6Q8IY26 295 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 UBL4BQ8N7F7 174 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 OR2AP1Q8NGE2 309 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 VOPP1Q96AW1 172 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 CCDC114Q96M63 670 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 ALS2CR12Q96Q35 445 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 HEMGNQ9BXL5 484 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 PABPC3Q9H361 631 aaKnown RBP17.47■□□□□ 0.39
PKD1-208ENST00000472577 TMEM9BQ9NQ34 198 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 ITM2CQ9NQX7 267 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 TRMT1Q9NXH9 659 aaKnown RBP17.47■□□□□ 0.39
PKD1-208ENST00000472577 MBD1Q9UIS9 605 aaPredicted RBP17.47■□□□□ 0.39
PKD1-208ENST00000472577 PPM1HQ9ULR3 514 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 PLXND1Q9Y4D7 1925 aa17.47■□□□□ 0.39
PKD1-208ENST00000472577 SHROOM3Q8TF72 1996 aa17.46■□□□□ 0.39
PKD1-208ENST00000472577 IGHV1OR15-9A0A0B4J2B8 117 aa17.46■□□□□ 0.39
PKD1-208ENST00000472577 USP27XA6NNY8 438 aa17.46■□□□□ 0.39
PKD1-208ENST00000472577 MID1O15344 667 aa17.46■□□□□ 0.39
PKD1-208ENST00000472577 ZSCAN12O43309 604 aa17.46■□□□□ 0.39
PKD1-208ENST00000472577 ZNF217O75362 1048 aa17.46■□□□□ 0.39
PKD1-208ENST00000472577 IL1BP01584 269 aa17.46■□□□□ 0.39
PKD1-208ENST00000472577 DNTTP04053 509 aa17.46■□□□□ 0.39
PKD1-208ENST00000472577 ACADMP11310 421 aa17.46■□□□□ 0.39
PKD1-208ENST00000472577 PECAM1P16284 738 aaPredicted RBP17.46■□□□□ 0.39
PKD1-208ENST00000472577 SLC8A1P32418 973 aa17.46■□□□□ 0.39
PKD1-208ENST00000472577 PTPN7P35236 360 aa17.46■□□□□ 0.39
PKD1-208ENST00000472577 RGRP47804 291 aa17.46■□□□□ 0.39
PKD1-208ENST00000472577 TPMTP51580 245 aa17.46■□□□□ 0.39
PKD1-208ENST00000472577 ZBTB16Q05516 673 aa17.46■□□□□ 0.39
PKD1-208ENST00000472577 RFTN1Q14699 578 aaPredicted RBP17.46■□□□□ 0.39
PKD1-208ENST00000472577 LBRQ14739 615 aaKnown RBP17.46■□□□□ 0.39
PKD1-208ENST00000472577 TMCO4Q5TGY1 634 aa17.46■□□□□ 0.39
PKD1-208ENST00000472577 BBS12Q6ZW61 710 aa17.46■□□□□ 0.39
PKD1-208ENST00000472577 LRRC49Q8IUZ0 686 aa17.46■□□□□ 0.39
PKD1-208ENST00000472577 OR6K2Q8NGY2 324 aa17.46■□□□□ 0.39
PKD1-208ENST00000472577 PIP4K2CQ8TBX8 421 aa17.46■□□□□ 0.39
PKD1-208ENST00000472577 GRIN3AQ8TCU5 1115 aa17.46■□□□□ 0.39
PKD1-208ENST00000472577 PIGKQ92643 395 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms