RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 NPFFR1Q9GZQ6 430 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 CDT1Q9H211 546 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 TAF1DQ9H5J8 278 aaPredicted RBP1.53□□□□□ -2.16
UBXN4-207ENST00000471246 CLK4Q9HAZ1 481 aaKnown RBP1.53□□□□□ -2.16
UBXN4-207ENST00000471246 WDR6Q9NNW5 1121 aaKnown RBP1.53□□□□□ -2.16
UBXN4-207ENST00000471246 OCIAD1Q9NX40 245 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 GRHL1Q9NZI5 618 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 IL36RNQ9UBH0 155 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 HDAC6Q9UBN7 1215 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 FBXO40Q9UH90 709 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 SRP68Q9UHB9 627 aaKnown RBP1.53□□□□□ -2.16
UBXN4-207ENST00000471246 TAGLN3Q9UI15 199 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 AGO1Q9UL18 857 aaKnown RBP1.53□□□□□ -2.16
UBXN4-207ENST00000471246 ICAM5Q9UMF0 924 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 DHDHQ9UQ10 334 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 DAAM1Q9Y4D1 1078 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 A0A096LPK6 155 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 IGLV5-52A0A0A0MRZ9 124 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 CCDC194A0A1B0GVG4 234 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 DYTNA2CJ06 578 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 DENND3A2RUS2 1198 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 SRRM3A6NNA2 597 aaPredicted RBP1.52□□□□□ -2.17
UBXN4-207ENST00000471246 TIMM23O14925 209 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 SLC16A5O15375 505 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 KIF1CO43896 1103 aaKnown RBP1.52□□□□□ -2.17
UBXN4-207ENST00000471246 LDB3O75112 727 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 SERPINI2O75830 405 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 DDNO94850 711 aaPredicted RBP1.52□□□□□ -2.17
UBXN4-207ENST00000471246 CAMTA2O94983 1202 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 ADAP00813 363 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 TK1P04183 234 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 CTPS1P17812 591 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 CD72P21854 359 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 GPR12P47775 334 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 MXI1P50539 228 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 TUBA1BP68363 451 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 ARHGAP8P85298 464 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 EEF1A2Q05639 463 aaKnown RBP1.52□□□□□ -2.17
UBXN4-207ENST00000471246 GOLGA8FQ08AF8 430 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 GRSF1Q12849 480 aaKnown RBP eCLIP1.52□□□□□ -2.17
UBXN4-207ENST00000471246 CHAF1AQ13111 956 aaPredicted RBP1.52□□□□□ -2.17
UBXN4-207ENST00000471246 SNTA1Q13424 505 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 CUL4BQ13620 913 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 EFHC1Q5JVL4 640 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 C9orf50Q5SZB4 431 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 FAM83BQ5T0W9 1011 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 NCAPH2Q6IBW4 605 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 GJB7Q6PEY0 223 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 CCDC174Q6PII3 467 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 ZNF329Q86UD4 541 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 RBFAQ8N0V3 343 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 GHDCQ8N2G8 530 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 GALNT15Q8N3T1 639 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 TEX45Q8NA69 505 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 SETD9Q8NE22 299 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 LINS1Q8NG48 757 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 OR4N2Q8NGD1 307 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 TBC1D22AQ8WUA7 517 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 DNASE2BQ8WZ79 361 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 NCSTNQ92542 709 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 RUBCNQ92622 972 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 SLC39A13Q96H72 371 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 RBM17Q96I25 401 aaKnown RBP1.52□□□□□ -2.17
UBXN4-207ENST00000471246 ADGRG7Q96K78 797 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 MPHOSPH6Q99547 160 aaKnown RBP1.52□□□□□ -2.17
UBXN4-207ENST00000471246 MSTO1Q9BUK6 570 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 C1QTNF4Q9BXJ3 329 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 CTDSP1Q9GZU7 261 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 TWSG1Q9GZX9 223 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 IL25Q9H293 177 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 RETREG1Q9H6L5 497 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 MVB12BQ9H7P6 319 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 SAYSD1Q9NPB0 183 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 TLR8Q9NR97 1041 aaKnown RBP1.52□□□□□ -2.17
UBXN4-207ENST00000471246 ATP8A2Q9NTI2 1148 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 TMEM51Q9NW97 253 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 NLKQ9UBE8 527 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 KCNG2Q9UJ96 466 aa1.52□□□□□ -2.17
UBXN4-207ENST00000471246 LOC102724159A0A0B4J2E5 919 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 STX16-NPEPL1H3BU86 382 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 STX16O14662 325 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 LINC01565O15544 149 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 FAM155BO75949 473 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 CH25HO95992 272 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 IL1AP01583 271 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 IGKV3-20P01619 116 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 AFPP02771 609 aaKnown RBP1.51□□□□□ -2.17
UBXN4-207ENST00000471246 SNRNP70P08621 437 aaKnown RBP1.51□□□□□ -2.17
UBXN4-207ENST00000471246 DAOP14920 347 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 ADD2P35612 726 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 CHKAP35790 457 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 RPL3P39023 403 aaKnown RBP1.51□□□□□ -2.17
UBXN4-207ENST00000471246 DLX5P56178 289 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 HILS1P60008 231 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 ACTR2P61160 394 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 SLC18A2Q05940 514 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 POU5F1BQ06416 359 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 FAM27E3Q08E93 113 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 MYBPHQ13203 477 aa1.51□□□□□ -2.17
UBXN4-207ENST00000471246 CAPSQ13938 189 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms