RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 LYSMD4Q5XG99 296 aa20.05■□□□□ 0.8
HDAC7-220ENST00000471235 EXD1Q8NHP7 514 aa20.05■□□□□ 0.8
HDAC7-220ENST00000471235 ANP32BQ92688 251 aaKnown RBP20.05■□□□□ 0.8
HDAC7-220ENST00000471235 RBM41Q96IZ5 413 aaKnown RBP20.05■□□□□ 0.8
HDAC7-220ENST00000471235 CINPQ9BW66 212 aaPredicted RBP20.05■□□□□ 0.8
HDAC7-220ENST00000471235 ARRDC1-AS1Q9H2J1 176 aa20.05■□□□□ 0.8
HDAC7-220ENST00000471235 C6orf106Q9H6K1 298 aaPredicted RBP20.05■□□□□ 0.8
HDAC7-220ENST00000471235 DTLQ9NZJ0 730 aa20.05■□□□□ 0.8
HDAC7-220ENST00000471235 EVLQ9UI08 416 aaPredicted RBP20.05■□□□□ 0.8
HDAC7-220ENST00000471235 PCDHGA5Q9Y5G8 931 aa20.05■□□□□ 0.8
HDAC7-220ENST00000471235 PCDHA3Q9Y5H8 950 aa20.05■□□□□ 0.8
HDAC7-220ENST00000471235 RIF1Q5UIP0 2472 aaKnown RBP20.05■□□□□ 0.8
HDAC7-220ENST00000471235 ATXN2Q99700 1313 aaKnown RBP20.04■□□□□ 0.8
HDAC7-220ENST00000471235 hCG_1818297A0A087WSY0 165 aa20.04■□□□□ 0.8
HDAC7-220ENST00000471235 BCLAF3A2AJT9 711 aaKnown RBP20.04■□□□□ 0.8
HDAC7-220ENST00000471235 CCDC66A2RUB6 948 aa20.04■□□□□ 0.8
HDAC7-220ENST00000471235 INSIG1O15503 277 aa20.04■□□□□ 0.8
HDAC7-220ENST00000471235 KRT86O43790 486 aa20.04■□□□□ 0.8
HDAC7-220ENST00000471235 FTCDO95954 541 aa20.04■□□□□ 0.8
HDAC7-220ENST00000471235 ITGB7P26010 798 aa20.04■□□□□ 0.8
HDAC7-220ENST00000471235 MPLP40238 635 aa20.04■□□□□ 0.8
HDAC7-220ENST00000471235 DYNLT1P63172 113 aa20.04■□□□□ 0.8
HDAC7-220ENST00000471235 SLC10A7Q0GE19 358 aa20.04■□□□□ 0.8
HDAC7-220ENST00000471235 GSE1Q14687 1217 aa20.04■□□□□ 0.8
HDAC7-220ENST00000471235 MYLK3Q32MK0 819 aa20.04■□□□□ 0.8
HDAC7-220ENST00000471235 LRRC49Q8IUZ0 686 aa20.04■□□□□ 0.8
HDAC7-220ENST00000471235 SYCE1Q8N0S2 351 aa20.04■□□□□ 0.8
HDAC7-220ENST00000471235 RNF10Q8N5U6 811 aaKnown RBP20.04■□□□□ 0.8
HDAC7-220ENST00000471235 TSEN2Q8NCE0 465 aaKnown RBP20.04■□□□□ 0.8
HDAC7-220ENST00000471235 CADM4Q8NFZ8 388 aa20.04■□□□□ 0.8
HDAC7-220ENST00000471235 ZNF419Q96HQ0 510 aaPredicted RBP20.04■□□□□ 0.8
HDAC7-220ENST00000471235 MAK16Q9BXY0 300 aaKnown RBP20.04■□□□□ 0.8
HDAC7-220ENST00000471235 PCED1AQ9H1Q7 454 aa20.04■□□□□ 0.8
HDAC7-220ENST00000471235 PARD6AQ9NPB6 346 aa20.04■□□□□ 0.8
HDAC7-220ENST00000471235 SEPT3Q9UH03 358 aa20.04■□□□□ 0.8
HDAC7-220ENST00000471235 GUCA1BQ9UMX6 200 aa20.04■□□□□ 0.8
HDAC7-220ENST00000471235 FRYLO94915 3013 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 EP300Q09472 2414 aaPredicted RBP20.03■□□□□ 0.8
HDAC7-220ENST00000471235 MEI4A8MW99 385 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 MUSKO15146 869 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 SLC7A4O43246 635 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 ZRANB2O95218 330 aaKnown RBP eCLIP20.03■□□□□ 0.8
HDAC7-220ENST00000471235 POP4O95707 220 aaKnown RBP20.03■□□□□ 0.8
HDAC7-220ENST00000471235 UGT2B4P06133 528 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 KRT10P13645 584 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 ZFXP17010 805 aaPredicted RBP20.03■□□□□ 0.8
HDAC7-220ENST00000471235 ITPKAP23677 461 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 ZNF235Q14590 738 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 LLGL1Q15334 1064 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 CCDC6Q16204 474 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 TFDP3Q5H9I0 405 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 PIP5KL1Q5T9C9 394 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 NPNTQ6UXI9 565 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.03■□□□□ 0.8
HDAC7-220ENST00000471235 ZNF662Q6ZS27 426 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 PARS2Q7L3T8 475 aaKnown RBP20.03■□□□□ 0.8
HDAC7-220ENST00000471235 PEX26Q7Z412 305 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 CCDC50Q8IVM0 306 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 RCOR2Q8IZ40 523 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 LRRN4Q8WUT4 740 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 ALG3Q92685 438 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 FOXJ1Q92949 421 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 HDAC11Q96DB2 347 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 PPP1R16AQ96I34 528 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 LRIG1Q96JA1 1093 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 KCNF1Q9H3M0 494 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 DYRK4Q9NR20 520 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 AMFRQ9UKV5 643 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 PACSIN2Q9UNF0 486 aaPredicted RBP20.03■□□□□ 0.8
HDAC7-220ENST00000471235 HEY1Q9Y5J3 304 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 CACNA1EQ15878 2313 aa20.03■□□□□ 0.8
HDAC7-220ENST00000471235 PIEZO1Q92508 2521 aa20.02■□□□□ 0.8
HDAC7-220ENST00000471235 C10orf142B7Z368 130 aa20.02■□□□□ 0.8
HDAC7-220ENST00000471235 PLRG1O43660 514 aaKnown RBP20.02■□□□□ 0.8
HDAC7-220ENST00000471235 MX2P20592 715 aa20.02■□□□□ 0.8
HDAC7-220ENST00000471235 PEX5P50542 639 aa20.02■□□□□ 0.8
HDAC7-220ENST00000471235 SPEM2Q0P670 501 aa20.02■□□□□ 0.8
HDAC7-220ENST00000471235 TFDP2Q14188 446 aa20.02■□□□□ 0.8
HDAC7-220ENST00000471235 PPP2R5EQ16537 467 aa20.02■□□□□ 0.8
HDAC7-220ENST00000471235 DCAF12L1Q5VU92 463 aa20.02■□□□□ 0.8
HDAC7-220ENST00000471235 PEAR1Q5VY43 1037 aaPredicted RBP20.02■□□□□ 0.8
HDAC7-220ENST00000471235 KAZNQ674X7 775 aa20.02■□□□□ 0.8
HDAC7-220ENST00000471235 TIGD7Q6NT04 549 aaPredicted RBP20.02■□□□□ 0.8
HDAC7-220ENST00000471235 NCEH1Q6PIU2 408 aa20.02■□□□□ 0.8
HDAC7-220ENST00000471235 PGBD5Q8N414 524 aa20.02■□□□□ 0.8
HDAC7-220ENST00000471235 OR2T34Q8NGX1 318 aa20.02■□□□□ 0.8
HDAC7-220ENST00000471235 OR14C36Q8NHC7 312 aa20.02■□□□□ 0.8
HDAC7-220ENST00000471235 MAML1Q92585 1016 aa20.02■□□□□ 0.8
HDAC7-220ENST00000471235 PIGKQ92643 395 aa20.02■□□□□ 0.8
HDAC7-220ENST00000471235 ZNF830Q96NB3 372 aaPredicted RBP20.02■□□□□ 0.8
HDAC7-220ENST00000471235 OLFM3Q96PB7 478 aa20.02■□□□□ 0.8
HDAC7-220ENST00000471235 TSGA13Q96PP4 275 aa20.02■□□□□ 0.8
HDAC7-220ENST00000471235 PSKH2Q96QS6 385 aa20.02■□□□□ 0.8
HDAC7-220ENST00000471235 OSBPL1AQ9BXW6 950 aa20.02■□□□□ 0.8
HDAC7-220ENST00000471235 HDAC8Q9BY41 377 aa20.02■□□□□ 0.8
HDAC7-220ENST00000471235 LZTFL1Q9NQ48 299 aa20.02■□□□□ 0.8
HDAC7-220ENST00000471235 PPP2R2CQ9Y2T4 447 aa20.02■□□□□ 0.8
HDAC7-220ENST00000471235 GVINP1Q7Z2Y8 2422 aa20.01■□□□□ 0.79
HDAC7-220ENST00000471235 FAM47DPA6NHR8 397 aa20.01■□□□□ 0.79
HDAC7-220ENST00000471235 METTL12A8MUP2 240 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms