RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.38■□□□□ 0.85
CDHR3-207ENST00000470188 MATN3O15232 486 aa20.38■□□□□ 0.85
CDHR3-207ENST00000470188 SIN3BO75182 1162 aa20.38■□□□□ 0.85
CDHR3-207ENST00000470188 HSPA4LO95757 839 aa20.38■□□□□ 0.85
CDHR3-207ENST00000470188 VCLP18206 1134 aa20.38■□□□□ 0.85
CDHR3-207ENST00000470188 GRM3Q14832 879 aa20.38■□□□□ 0.85
CDHR3-207ENST00000470188 SFT2D3Q587I9 215 aa20.38■□□□□ 0.85
CDHR3-207ENST00000470188 PCID2Q5JVF3 399 aa20.38■□□□□ 0.85
CDHR3-207ENST00000470188 PKN3Q6P5Z2 889 aa20.38■□□□□ 0.85
CDHR3-207ENST00000470188 SCD5Q86SK9 330 aa20.38■□□□□ 0.85
CDHR3-207ENST00000470188 LCA5Q86VQ0 697 aa20.38■□□□□ 0.85
CDHR3-207ENST00000470188 BTBD9Q96Q07 612 aa20.38■□□□□ 0.85
CDHR3-207ENST00000470188 ZNF195O14628 629 aa20.37■□□□□ 0.85
CDHR3-207ENST00000470188 PEX1O43933 1283 aa20.37■□□□□ 0.85
CDHR3-207ENST00000470188 FLT3LGP49771 235 aa20.37■□□□□ 0.85
CDHR3-207ENST00000470188 BTKQ06187 659 aa20.37■□□□□ 0.85
CDHR3-207ENST00000470188 POU6F1Q14863 301 aa20.37■□□□□ 0.85
CDHR3-207ENST00000470188 ZC3HC1Q86WB0 502 aaKnown RBP20.37■□□□□ 0.85
CDHR3-207ENST00000470188 FICDQ9BVA6 458 aa20.37■□□□□ 0.85
CDHR3-207ENST00000470188 RHOJQ9H4E5 214 aa20.37■□□□□ 0.85
CDHR3-207ENST00000470188 TLK1Q9UKI8 766 aa20.37■□□□□ 0.85
CDHR3-207ENST00000470188 NUDT5Q9UKK9 219 aa20.37■□□□□ 0.85
CDHR3-207ENST00000470188 PCDHB8Q9UN66 801 aa20.37■□□□□ 0.85
CDHR3-207ENST00000470188 NOD1Q9Y239 953 aa20.37■□□□□ 0.85
CDHR3-207ENST00000470188 CDY1Q9Y6F8 540 aa20.37■□□□□ 0.85
CDHR3-207ENST00000470188 TMEM114B3SHH9 223 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 MOCS2O96007 188 aaPredicted RBP20.36■□□□□ 0.85
CDHR3-207ENST00000470188 OR4Q2P0C623 313 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 MYL4P12829 197 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 RANBP1P43487 201 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 ERFP50548 548 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 MSLNQ13421 630 aaPredicted RBP20.36■□□□□ 0.85
CDHR3-207ENST00000470188 VWA5B1Q5TIE3 1220 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 PGM2L1Q6PCE3 622 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 NAPRTQ6XQN6 538 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 ZNF598Q86UK7 904 aaKnown RBP20.36■□□□□ 0.85
CDHR3-207ENST00000470188 SPATA24Q86W54 205 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 SCN4BQ8IWT1 228 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 PYDC1Q8WXC3 89 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 OXCT2Q9BYC2 517 aaPredicted RBP20.36■□□□□ 0.85
CDHR3-207ENST00000470188 NMUR1Q9HB89 426 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 NDFIP2Q9NV92 336 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 MID2Q9UJV3 735 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 ANKRD6Q9Y2G4 727 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 MRPL42Q9Y6G3 142 aaKnown RBP20.36■□□□□ 0.85
CDHR3-207ENST00000470188 TRIM13O60858 407 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 H2AFYO75367 372 aaKnown RBP20.36■□□□□ 0.85
CDHR3-207ENST00000470188 SAT1P21673 171 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 CHN2P52757 468 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 COPAP53621 1224 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 GEMP55040 296 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 CACNB2Q08289 660 aaPredicted RBP20.36■□□□□ 0.85
CDHR3-207ENST00000470188 SLC39A12Q504Y0 691 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 GDPD5Q8WTR4 605 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 HIC2Q96JB3 615 aa20.36■□□□□ 0.85
CDHR3-207ENST00000470188 TRMT13Q9NUP7 481 aaKnown RBP20.36■□□□□ 0.85
CDHR3-207ENST00000470188 PATJQ8NI35 1801 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 NLRC5Q86WI3 1866 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 A0A1W2PQH9 124 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 MEI4A8MW99 385 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 CASQ2O14958 399 aaPredicted RBP20.35■□□□□ 0.85
CDHR3-207ENST00000470188 APOA4P06727 396 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 SREBF2Q12772 1141 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 USP10Q14694 798 aaKnown RBP20.35■□□□□ 0.85
CDHR3-207ENST00000470188 MMEL1Q495T6 779 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 ARTNQ5T4W7 220 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 TIGD7Q6NT04 549 aaPredicted RBP20.35■□□□□ 0.85
CDHR3-207ENST00000470188 ZNF781Q8N8C0 355 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 PPHLN1Q8NEY8 458 aaKnown RBP20.35■□□□□ 0.85
CDHR3-207ENST00000470188 ACTRT2Q8TDY3 377 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 SLC26A7Q8TE54 656 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 TSNARE1Q96NA8 513 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 PPP1R2P1Q96PQ5 205 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 CDH19Q9H159 772 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 TASP1Q9H6P5 420 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 PTPRDP23468 1912 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.35■□□□□ 0.85
CDHR3-207ENST00000470188 E9PAM4 449 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 HLA-DQB2P05538 268 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 CSRP3P50461 194 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 CLCN2P51788 898 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 SLC25A3Q00325 362 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 USP4Q13107 963 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 CCNIQ14094 377 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 PDK3Q15120 406 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 UGP2Q16851 508 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 SH2D4BQ5SQS7 431 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 DENND5AQ6IQ26 1287 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 RNF111Q6ZNA4 994 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 RTL3Q8N8U3 475 aaKnown RBP20.35■□□□□ 0.85
CDHR3-207ENST00000470188 RBM22Q9NW64 420 aaKnown RBP eCLIP20.35■□□□□ 0.853e-6■■■□□ 18.6
CDHR3-207ENST00000470188 ABI2Q9NYB9 513 aaPredicted RBP20.35■□□□□ 0.85
CDHR3-207ENST00000470188 ADAMTS6Q9UKP5 1117 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 HS3ST4Q9Y661 456 aa20.35■□□□□ 0.85
CDHR3-207ENST00000470188 KCNU1A8MYU2 1149 aa20.34■□□□□ 0.85
CDHR3-207ENST00000470188 PHGDHO43175 533 aaKnown RBP20.34■□□□□ 0.85
CDHR3-207ENST00000470188 PYGLP06737 847 aa20.34■□□□□ 0.85
CDHR3-207ENST00000470188 GRIA2P42262 883 aa20.34■□□□□ 0.85
CDHR3-207ENST00000470188 AQP4P55087 323 aa20.34■□□□□ 0.85
CDHR3-207ENST00000470188 KLHDC9Q8NEP7 349 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms