RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 CCDC89Q8N998 374 aa8.53□□□□□ -1.04
GAPVD1-213ENST00000469498 ATP11CQ8NB49 1132 aa8.53□□□□□ -1.04
GAPVD1-213ENST00000469498 CCDC110Q8TBZ0 833 aa8.53□□□□□ -1.04
GAPVD1-213ENST00000469498 GRK7Q8WTQ7 553 aa8.53□□□□□ -1.04
GAPVD1-213ENST00000469498 UCMAQ8WVF2 138 aa8.53□□□□□ -1.04
GAPVD1-213ENST00000469498 FAM3CQ92520 227 aa8.53□□□□□ -1.04
GAPVD1-213ENST00000469498 MAML1Q92585 1016 aa8.53□□□□□ -1.04
GAPVD1-213ENST00000469498 TTC17Q96AE7 1141 aa8.53□□□□□ -1.04
GAPVD1-213ENST00000469498 ACDQ96AP0 544 aa8.53□□□□□ -1.04
GAPVD1-213ENST00000469498 ERLEC1Q96DZ1 483 aa8.53□□□□□ -1.04
GAPVD1-213ENST00000469498 MRGPRX3Q96LB0 322 aa8.53□□□□□ -1.04
GAPVD1-213ENST00000469498 AGAP3Q96P47 875 aa8.53□□□□□ -1.04
GAPVD1-213ENST00000469498 FERMT1Q9BQL6 677 aa8.53□□□□□ -1.04
GAPVD1-213ENST00000469498 TM6SF2Q9BZW4 377 aa8.53□□□□□ -1.04
GAPVD1-213ENST00000469498 TNKS2Q9H2K2 1166 aa8.53□□□□□ -1.04
GAPVD1-213ENST00000469498 MTG2Q9H4K7 406 aa8.53□□□□□ -1.04
GAPVD1-213ENST00000469498 USP29Q9HBJ7 922 aa8.53□□□□□ -1.04
GAPVD1-213ENST00000469498 RBM22Q9NW64 420 aaKnown RBP eCLIP8.53□□□□□ -1.04
GAPVD1-213ENST00000469498 ELOVL2Q9NXB9 296 aa8.53□□□□□ -1.04
GAPVD1-213ENST00000469498 LHX3Q9UBR4 397 aa8.53□□□□□ -1.04
GAPVD1-213ENST00000469498 PCYOX1Q9UHG3 505 aa8.53□□□□□ -1.04
GAPVD1-213ENST00000469498 XIRP2A4UGR9 3374 aa8.53□□□□□ -1.04
GAPVD1-213ENST00000469498 SPTBN5Q9NRC6 3674 aaKnown RBP8.52□□□□□ -1.04
GAPVD1-213ENST00000469498 A0A0A0MRY4 1105 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 TTC24A2A3L6 582 aaPredicted RBP8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 KRBA1A5PL33 1030 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 SHISA7A6NL88 538 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 TTC34A8MYJ7 566 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 K7EQS6 105 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 MUSKO15146 869 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 ZBTB24O43167 697 aaPredicted RBP8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 GJB3O75712 270 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 SLU7O95391 586 aaKnown RBP8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 ATP5BP06576 529 aaKnown RBP8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 DLDP09622 509 aaKnown RBP8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 SRCP12931 536 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 HLA-EP13747 358 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 GLULP15104 373 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 NFKB1P19838 968 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 PRKCHP24723 683 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 PSMB4P28070 264 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 WASP42768 502 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 RGRP47804 291 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 RENBPP51606 427 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 ST8SIA6P61647 398 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 SH3BP2P78314 561 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 SKOR1P84550 965 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 DSC2Q02487 901 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 LMNB2Q03252 620 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 ITKQ08881 620 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 GRSF1Q12849 480 aaKnown RBP eCLIP8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 PTK6Q13882 451 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 DHX34Q14147 1143 aaKnown RBP8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 ZNF234Q14588 700 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 NUMA1Q14980 2115 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 CYTH1Q15438 398 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 ACCSLQ4AC99 568 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 PREPLQ4J6C6 727 aaPredicted RBP8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 TMEM196Q5HYL7 178 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 ANKRD20A2Q5SQ80 823 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 ATXN7L2Q5T6C5 722 aaPredicted RBP8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 ANKRD20A1Q5TYW2 823 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 EMC10Q5UCC4 262 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 MARC1Q5VT66 337 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 ANKRD20A3Q5VUR7 823 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 SERPINA13PQ6UXR4 307 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 ARHGEF18Q6ZSZ5 1173 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 Q6ZVU0 165 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 PID1Q7Z2X4 250 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 SUGP1Q8IWZ8 645 aaKnown RBP8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 SIX5Q8N196 739 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 BBS5Q8N3I7 341 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 MMGT1Q8N4V1 131 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 SH2D3CQ8N5H7 860 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 ZNF513Q8N8E2 541 aaPredicted RBP8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 ZNF511Q8NB15 262 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 TSEN2Q8NCE0 465 aaKnown RBP8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 OR6K2Q8NGY2 324 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 ATL2Q8NHH9 583 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 EXOC4Q96A65 974 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 RTP4Q96DX8 246 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 MSANTD3Q96H12 275 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 MYO19Q96H55 970 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 SPATA13Q96N96 652 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 RUNDC3BQ96NL0 473 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 ZNF599Q96NL3 588 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 ACOX2Q99424 681 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 IL12RB2Q99665 862 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 TRIM31Q9BZY9 425 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 PCDH9Q9HC56 1237 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 CACNA2D2Q9NY47 1150 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 SEPT3Q9UH03 358 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 ASIC3Q9UHC3 531 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 RSPH14Q9UHP6 348 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 SLCO3A1Q9UIG8 710 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 HCN2Q9UL51 889 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 HS3ST2Q9Y278 367 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 DRG1Q9Y295 367 aaKnown RBP8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 PLXNB3Q9ULL4 1909 aa8.52□□□□□ -1.05
GAPVD1-213ENST00000469498 OPHN1O60890 802 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms