RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 CXXC1Q9P0U4 656 aaPredicted RBP9.47□□□□□ -0.89
SMC1A-205ENST00000469129 ZCWPW2A0A1B0GU75 182 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 A0A1W2PPC1 479 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 LINC01553A4QN01 128 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 C2orf71A6NGG8 1288 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 FOXO6A8MYZ6 492 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 TCP11X1B4DZS4 312 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 H0Y626 953 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 H3BNC9 293 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 TBL1XO60907 577 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 XYLBO75191 536 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 KIAA0754O94854 1291 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 LUC7L3O95232 432 aaKnown RBP9.46□□□□□ -0.9
SMC1A-205ENST00000469129 PAPSS2O95340 614 aaPredicted RBP9.46□□□□□ -0.9
SMC1A-205ENST00000469129 KLKB1P03952 638 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 ITGA2BP08514 1039 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 POU2F2P09086 479 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 HNRNPA1P09651 372 aaKnown RBP eCLIP9.46□□□□□ -0.9
SMC1A-205ENST00000469129 PYGBP11216 843 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 CLCN4P51793 760 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 LIMK2P53671 638 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 EPHA5P54756 1037 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 WDR4P57081 412 aaKnown RBP9.46□□□□□ -0.9
SMC1A-205ENST00000469129 RPS24P62847 133 aaKnown RBP9.46□□□□□ -0.9
SMC1A-205ENST00000469129 CYP4F8P98187 520 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 DSC2Q02487 901 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 OLIG2Q13516 323 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 CDH18Q13634 790 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 BMPR2Q13873 1038 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 SEPT6Q14141 434 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 MPP2Q14168 576 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 ITIH4Q14624 930 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 POU6F1Q14863 301 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 PCSK7Q16549 785 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 MPPE1Q53F39 396 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 RALGPS1Q5JS13 557 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 MPP7Q5T2T1 576 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 STXBP5Q5T5C0 1151 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 TXNDC8Q6A555 127 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 RANBP10Q6VN20 620 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 METTL3Q86U44 580 aaKnown RBP9.46□□□□□ -0.9
SMC1A-205ENST00000469129 CNTN4Q8IWV2 1026 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 LMNTD2Q8IXW0 634 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.46□□□□□ -0.9
SMC1A-205ENST00000469129 ARL14EPQ8N8R7 260 aaPredicted RBP9.46□□□□□ -0.9
SMC1A-205ENST00000469129 MRPL43Q8N983 215 aaKnown RBP9.46□□□□□ -0.9
SMC1A-205ENST00000469129 OR7D4Q8NG98 312 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 RAB3IL1Q8TBN0 382 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 TCP10LQ8TDR4 215 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 POF1BQ8WVV4 589 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 PEX13Q92968 403 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 TADA1Q96BN2 335 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 ZNF419Q96HQ0 510 aaPredicted RBP9.46□□□□□ -0.9
SMC1A-205ENST00000469129 SERAC1Q96JX3 654 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 PSKH2Q96QS6 385 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 SRPK1Q96SB4 655 aaKnown RBP9.46□□□□□ -0.9
SMC1A-205ENST00000469129 TRIM56Q9BRZ2 755 aaKnown RBP9.46□□□□□ -0.9
SMC1A-205ENST00000469129 LRRC3Q9BY71 257 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 ACE2Q9BYF1 805 aaPredicted RBP9.46□□□□□ -0.9
SMC1A-205ENST00000469129 VPS11Q9H270 941 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 ATXN3LQ9H3M9 355 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 RABEP2Q9H5N1 569 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 MLXIPLQ9NP71 852 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 GKN1Q9NS71 199 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 PCMTD2Q9NV79 361 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 MID2Q9UJV3 735 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 KIF26AQ9ULI4 1882 aaPredicted RBP9.46□□□□□ -0.9
SMC1A-205ENST00000469129 C2orf16Q68DN1 1984 aa9.46□□□□□ -0.9
SMC1A-205ENST00000469129 NOTCH4Q99466 2003 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 CXorf51AA0A1B0GTR3 108 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 GOLGA8RI6L899 631 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 TSPAN3O60637 253 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 UGT1A9O60656 530 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 RFPL1O75677 317 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 PIAS1O75925 651 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 EPOP01588 193 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 CYBBP04839 570 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 MPOP05164 745 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 MMP2P08253 660 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 GSTA1P08263 222 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 SPATA31D3P0C874 917 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 ERVK-10P10266 1014 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 MYL4P12829 197 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 PTPN2P17706 415 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 TPH1P17752 444 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 NMBRP28336 390 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 CRHR1P34998 444 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 POLD2P49005 469 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 MAXP61244 160 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 PDE1BQ01064 536 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 PPARDQ03181 441 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 NSUN2Q08J23 767 aaKnown RBP eCLIP9.45□□□□□ -0.9
SMC1A-205ENST00000469129 THOC5Q13769 683 aaKnown RBP9.45□□□□□ -0.9
SMC1A-205ENST00000469129 SLC1A5Q15758 541 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 INSCQ1MX18 579 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 MROH9Q5TGP6 573 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 FYB2Q5VWT5 728 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 RNF219Q5W0B1 726 aaPredicted RBP9.45□□□□□ -0.9
SMC1A-205ENST00000469129 DENND5AQ6IQ26 1287 aa9.45□□□□□ -0.9
SMC1A-205ENST00000469129 CXorf57Q6NSI4 855 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms