RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 CCZ1P86791 482 aaPredicted RBP8.69□□□□□ -1.02
SSBP1-208ENST00000469123 MMRN1Q13201 1228 aa8.69□□□□□ -1.02
SSBP1-208ENST00000469123 LBRQ14739 615 aaKnown RBP8.69□□□□□ -1.02
SSBP1-208ENST00000469123 MYLK3Q32MK0 819 aa8.69□□□□□ -1.02
SSBP1-208ENST00000469123 ATP13A4Q4VNC1 1196 aa8.69□□□□□ -1.02
SSBP1-208ENST00000469123 MARC1Q5VT66 337 aa8.69□□□□□ -1.02
SSBP1-208ENST00000469123 BRAT1Q6PJG6 821 aa8.69□□□□□ -1.02
SSBP1-208ENST00000469123 CYP2U1Q7Z449 544 aa8.69□□□□□ -1.02
SSBP1-208ENST00000469123 NT5DC3Q86UY8 548 aa8.69□□□□□ -1.02
SSBP1-208ENST00000469123 RFX6Q8HWS3 928 aa8.69□□□□□ -1.02
SSBP1-208ENST00000469123 FAM160A2Q8N612 972 aaPredicted RBP8.69□□□□□ -1.02
SSBP1-208ENST00000469123 TRIM58Q8NG06 486 aa8.69□□□□□ -1.02
SSBP1-208ENST00000469123 OR2T34Q8NGX1 318 aa8.69□□□□□ -1.02
SSBP1-208ENST00000469123 RLN3Q8WXF3 142 aa8.69□□□□□ -1.02
SSBP1-208ENST00000469123 TOE1Q96GM8 510 aaKnown RBP8.69□□□□□ -1.02
SSBP1-208ENST00000469123 ZNF641Q96N77 438 aaPredicted RBP8.69□□□□□ -1.02
SSBP1-208ENST00000469123 PSKH2Q96QS6 385 aa8.69□□□□□ -1.02
SSBP1-208ENST00000469123 ATP13A3Q9H7F0 1226 aa8.69□□□□□ -1.02
SSBP1-208ENST00000469123 VPS45Q9NRW7 570 aa8.69□□□□□ -1.02
SSBP1-208ENST00000469123 ETNK2Q9NVF9 386 aa8.69□□□□□ -1.02
SSBP1-208ENST00000469123 HECAQ9UBI9 543 aaPredicted RBP8.69□□□□□ -1.02
SSBP1-208ENST00000469123 DKK3Q9UBP4 350 aa8.69□□□□□ -1.02
SSBP1-208ENST00000469123 RAPGEFL1Q9UHV5 662 aa8.69□□□□□ -1.02
SSBP1-208ENST00000469123 SALL4Q9UJQ4 1053 aa8.69□□□□□ -1.02
SSBP1-208ENST00000469123 DUSP10Q9Y6W6 482 aa8.69□□□□□ -1.02
SSBP1-208ENST00000469123 ZFHX2Q9C0A1 2572 aaPredicted RBP8.69□□□□□ -1.02
SSBP1-208ENST00000469123 KNL1Q8NG31 2342 aa8.69□□□□□ -1.02
SSBP1-208ENST00000469123 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.68□□□□□ -1.02
SSBP1-208ENST00000469123 A0A1W2PP55 124 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 BCLAF3A2AJT9 711 aaKnown RBP8.68□□□□□ -1.02
SSBP1-208ENST00000469123 GOLGA6L9A6NEM1 432 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 METTL12A8MUP2 240 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 MEI4A8MW99 385 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 HACD1B0YJ81 288 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 J3KR12 359 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 KPNA3O00505 521 aaPredicted RBP8.68□□□□□ -1.02
SSBP1-208ENST00000469123 MATN3O15232 486 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 PLRG1O43660 514 aaKnown RBP8.68□□□□□ -1.02
SSBP1-208ENST00000469123 AP1G1O43747 822 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 MFSD11O43934 449 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 BNIP3LO60238 219 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 MAFKO60675 156 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 LEFTY1O75610 366 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 RNASEH2AO75792 299 aaKnown RBP8.68□□□□□ -1.02
SSBP1-208ENST00000469123 TJP3O95049 919 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 VAV1P15498 845 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 SERPINA4P29622 427 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 MMP13P45452 471 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 CCR5P51681 352 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 NEK3P51956 506 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 ADPRHP54922 357 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 PPIDQ08752 370 aaKnown RBP8.68□□□□□ -1.02
SSBP1-208ENST00000469123 CCDC173Q0VFZ6 552 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 ZNF805Q5CZA5 627 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 PEAR1Q5VY43 1037 aaPredicted RBP8.68□□□□□ -1.02
SSBP1-208ENST00000469123 MFSD7Q6UXD7 560 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 SPOCD1Q6ZMY3 1216 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 ERN2Q76MJ5 926 aaKnown RBP8.68□□□□□ -1.02
SSBP1-208ENST00000469123 TRIM69Q86WT6 500 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 SYT12Q8IV01 421 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 CCDC50Q8IVM0 306 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 RYBPQ8N488 228 aaPredicted RBP8.68□□□□□ -1.02
SSBP1-208ENST00000469123 HDDC3Q8N4P3 179 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 TEX26Q8N6G2 289 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 PQLC3Q8N755 202 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 PLD5Q8N7P1 536 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 TTC13Q8NBP0 860 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 FAM174AQ8TBP5 190 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 DNASE2BQ8WZ79 361 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 SPOCK2Q92563 424 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 MAML1Q92585 1016 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 P3H4Q92791 437 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 RNF25Q96BH1 459 aaPredicted RBP8.68□□□□□ -1.02
SSBP1-208ENST00000469123 HAUS1Q96CS2 278 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 VAT1Q99536 393 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 HINFPQ9BQA5 517 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 MGME1Q9BQP7 344 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 TM6SF2Q9BZW4 377 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 TNKS2Q9H2K2 1166 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 MTG2Q9H4K7 406 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 ZDHHC6Q9H6R6 413 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 KLHL11Q9NVR0 708 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 DTLQ9NZJ0 730 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 EVLQ9UI08 416 aaPredicted RBP8.68□□□□□ -1.02
SSBP1-208ENST00000469123 MBD1Q9UIS9 605 aaPredicted RBP8.68□□□□□ -1.02
SSBP1-208ENST00000469123 GUCA1BQ9UMX6 200 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 WASF2Q9Y6W5 498 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 TNRC6BQ9UPQ9 1833 aaKnown RBP8.68□□□□□ -1.02
SSBP1-208ENST00000469123 ANKRD36A6QL64 1941 aa8.68□□□□□ -1.02
SSBP1-208ENST00000469123 hCG_1818297A0A087WSY0 165 aa8.67□□□□□ -1.02
SSBP1-208ENST00000469123 APOC4-APOC2K7ER74 178 aa8.67□□□□□ -1.02
SSBP1-208ENST00000469123 KRIT1O00522 736 aa8.67□□□□□ -1.02
SSBP1-208ENST00000469123 CST8O60676 142 aa8.67□□□□□ -1.02
SSBP1-208ENST00000469123 RNGTTO60942 597 aaKnown RBP8.67□□□□□ -1.02
SSBP1-208ENST00000469123 SOCS5O75159 536 aa8.67□□□□□ -1.02
SSBP1-208ENST00000469123 APOC2P02655 101 aa8.67□□□□□ -1.02
SSBP1-208ENST00000469123 CTSLP07711 333 aa8.67□□□□□ -1.02
SSBP1-208ENST00000469123 KRT10P13645 584 aa8.67□□□□□ -1.02
SSBP1-208ENST00000469123 TNNT1P13805 278 aa8.67□□□□□ -1.02
SSBP1-208ENST00000469123 BCKDHBP21953 392 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms