RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 AAK1Q2M2I8 961 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 LRRC8BQ6P9F7 803 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 CENPUQ71F23 418 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 KDELC2Q7Z4H8 507 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 RELL1Q8IUW5 271 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 PDIK1LQ8N165 341 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 CPA6Q8N4T0 437 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 MREGQ8N565 214 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 ATP11CQ8NB49 1132 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 SORCS1Q8WY21 1168 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 TTC17Q96AE7 1141 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 MRGPRX2Q96LB1 330 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 APOL2Q9BQE5 337 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 PHF7Q9BWX1 381 aaPredicted RBP13.02□□□□□ -0.33
RUNX1-213ENST00000469087 NOD2Q9HC29 1040 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 SAYSD1Q9NPB0 183 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 PIH1D1Q9NWS0 290 aaKnown RBP13.02□□□□□ -0.33
RUNX1-213ENST00000469087 DEC1Q9P2X7 70 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 LHX3Q9UBR4 397 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 LIMD1Q9UGP4 676 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 SLCO3A1Q9UIG8 710 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 MIA3Q5JRA6 1907 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 CXorf51AA0A1B0GTR3 108 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 PRRT4C9JH25 899 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 PSMD3O43242 534 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 POLR2EP19388 210 aaKnown RBP13.01□□□□□ -0.33
RUNX1-213ENST00000469087 ADRA1AP35348 466 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 HSD17B3P37058 310 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 MAGEA3P43357 314 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 MAGEA4P43358 317 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 WNT3AP56704 352 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 GEMIN4P57678 1058 aaKnown RBP13.01□□□□□ -0.33
RUNX1-213ENST00000469087 SARNPP82979 210 aaKnown RBP13.01□□□□□ -0.33
RUNX1-213ENST00000469087 MPP3Q13368 585 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 SMAD2Q15796 467 aaKnown RBP13.01□□□□□ -0.33
RUNX1-213ENST00000469087 KYNUQ16719 465 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 ITPRIPL2Q3MIP1 535 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 BBS9Q3SYG4 887 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 DGKKQ5KSL6 1271 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 KDELC1Q6UW63 502 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 RANBP10Q6VN20 620 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 PPP1R21Q6ZMI0 780 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 IGDCC3Q8IVU1 814 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 ZBED8Q8IZ13 594 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 PHTF2Q8N3S3 785 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 OR52K1Q8NGK4 314 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 C9orf72Q96LT7 481 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 WDR83Q9BRX9 315 aaKnown RBP13.01□□□□□ -0.33
RUNX1-213ENST00000469087 FRMD8Q9BZ67 464 aaPredicted RBP13.01□□□□□ -0.33
RUNX1-213ENST00000469087 EPB41L4BQ9H329 900 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 CDC42EP4Q9H3Q1 356 aaKnown RBP13.01□□□□□ -0.33
RUNX1-213ENST00000469087 BRD9Q9H8M2 597 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 LRRC40Q9H9A6 602 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 KCNK12Q9HB15 430 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 HS3ST2Q9Y278 367 aa13.01□□□□□ -0.33
RUNX1-213ENST00000469087 INSIG1O15503 277 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 SASH3O75995 380 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 MLNP12872 115 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 RHOAP61586 193 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 SULT2A1Q06520 285 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 PCSK7Q16549 785 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 LEXMQ3ZCV2 418 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 ATXN7L2Q5T6C5 722 aaPredicted RBP13□□□□□ -0.33
RUNX1-213ENST00000469087 DENND5AQ6IQ26 1287 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 ANKMY2Q8IV38 441 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 SFTPA1Q8IWL2 248 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 MPP5Q8N3R9 675 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 SLC44A3Q8N4M1 653 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 SH2D3CQ8N5H7 860 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 IPMKQ8NFU5 416 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 CYB5D2Q8WUJ1 264 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 NXPE3Q969Y0 559 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 SIGLEC10Q96LC7 697 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 PPP1R2P1Q96PQ5 205 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 NUDCD1Q96RS6 583 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 XAB2Q9HCS7 855 aaKnown RBP13□□□□□ -0.33
RUNX1-213ENST00000469087 CASS4Q9NQ75 786 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 VPS45Q9NRW7 570 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 ERVW-1Q9UQF0 538 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 TEX264Q9Y6I9 313 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 MYO10Q9HD67 2058 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 COL4A3Q01955 1670 aa13□□□□□ -0.33
RUNX1-213ENST00000469087 GOLGA6CA6NDK9 693 aa12.99□□□□□ -0.33
RUNX1-213ENST00000469087 GOLGA6BA6NDN3 693 aa12.99□□□□□ -0.33
RUNX1-213ENST00000469087 MAP2K7O14733 419 aa12.99□□□□□ -0.33
RUNX1-213ENST00000469087 EIF3HO15372 352 aaKnown RBP eCLIP12.99□□□□□ -0.33
RUNX1-213ENST00000469087 GOLGA6DP0CG33 693 aa12.99□□□□□ -0.33
RUNX1-213ENST00000469087 CES1P23141 567 aa12.99□□□□□ -0.33
RUNX1-213ENST00000469087 ELK3P41970 407 aa12.99□□□□□ -0.33
RUNX1-213ENST00000469087 GRAMD4Q6IC98 578 aa12.99□□□□□ -0.33
RUNX1-213ENST00000469087 NAPEPLDQ6IQ20 393 aa12.99□□□□□ -0.33
RUNX1-213ENST00000469087 HDXQ7Z353 690 aa12.99□□□□□ -0.33
RUNX1-213ENST00000469087 PLCD3Q8N3E9 789 aa12.99□□□□□ -0.33
RUNX1-213ENST00000469087 UBLCP1Q8WVY7 318 aaPredicted RBP12.99□□□□□ -0.33
RUNX1-213ENST00000469087 ZBTB9Q96C00 473 aa12.99□□□□□ -0.33
RUNX1-213ENST00000469087 MRGPRX3Q96LB0 322 aa12.99□□□□□ -0.33
RUNX1-213ENST00000469087 TBL1YQ9BQ87 522 aa12.99□□□□□ -0.33
RUNX1-213ENST00000469087 FICDQ9BVA6 458 aa12.99□□□□□ -0.33
RUNX1-213ENST00000469087 TM6SF2Q9BZW4 377 aa12.99□□□□□ -0.33
RUNX1-213ENST00000469087 CIPCQ9C0C6 399 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms