RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 K7ENP7 123 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 RIOK3O14730 519 aaKnown RBP13.32□□□□□ -0.28
PTPN7-207ENST00000468385 FPGTO14772 594 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 TPP1O14773 563 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 CASC3O15234 703 aaKnown RBP13.32□□□□□ -0.28
PTPN7-207ENST00000468385 CD160O95971 181 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 C6P13671 934 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 JUNDP17535 347 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 RBMS1P29558 406 aaKnown RBP13.32□□□□□ -0.28
PTPN7-207ENST00000468385 CLCN1P35523 988 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 ABL2P42684 1182 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 CCNHP51946 323 aaPredicted RBP13.32□□□□□ -0.28
PTPN7-207ENST00000468385 SNX16P57768 344 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 RNASE9P60153 205 aaKnown RBP13.32□□□□□ -0.28
PTPN7-207ENST00000468385 PFN3P60673 137 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 PTK2Q05397 1052 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 DEUP1Q05D60 604 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 PERM1Q5SV97 790 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 RETSATQ6NUM9 610 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 INO80CQ6PI98 192 aaPredicted RBP13.32□□□□□ -0.28
PTPN7-207ENST00000468385 ZNF783Q6ZMS7 281 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 GBP6Q6ZN66 633 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 RBM44Q6ZP01 1051 aaKnown RBP13.32□□□□□ -0.28
PTPN7-207ENST00000468385 SLC47A2Q86VL8 602 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 ZSCAN30Q86W11 494 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 TPCN2Q8NHX9 752 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 LMX1AQ8TE12 382 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 SPON2Q9BUD6 331 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 BOCQ9BWV1 1114 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 C1QTNF2Q9BXJ5 285 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 TCEAL2Q9H3H9 227 aaPredicted RBP13.32□□□□□ -0.28
PTPN7-207ENST00000468385 SYNCQ9H7C4 482 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 ATP13A1Q9HD20 1204 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 NCKIPSDQ9NZQ3 722 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 IPO11Q9UI26 975 aaKnown RBP13.32□□□□□ -0.28
PTPN7-207ENST00000468385 PNMA8BQ9ULN7 279 aaPredicted RBP13.32□□□□□ -0.28
PTPN7-207ENST00000468385 FCF1Q9Y324 198 aaKnown RBP13.32□□□□□ -0.28
PTPN7-207ENST00000468385 COL6A6A6NMZ7 2263 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 IGLON5A6NGN9 336 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 CYSRT1A8MQ03 144 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 SRGAP2O75044 1071 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 TCEA3O75764 348 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 FGFR1OPO95684 399 aaKnown RBP13.31□□□□□ -0.28
PTPN7-207ENST00000468385 F9P00740 461 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 PNMA6AP0CW24 399 aaPredicted RBP13.31□□□□□ -0.28
PTPN7-207ENST00000468385 PON1P27169 355 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 KRT9P35527 623 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 DNA2P51530 1060 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 PDX1P52945 283 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 SLC20A2Q08357 652 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 NR0B2Q15466 257 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 EXOC3L4Q17RC7 722 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 SLC25A52Q3SY17 297 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 ACBD5Q5T8D3 534 aaPredicted RBP13.31□□□□□ -0.28
PTPN7-207ENST00000468385 KIAA1614Q5VZ46 1190 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 SMYD5Q6GMV2 418 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 BNIPLQ7Z465 357 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 RBFAQ8N0V3 343 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 DENND6BQ8NEG7 585 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 ASB12Q8WXK4 309 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 VOPP1Q96AW1 172 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 IL12RB2Q99665 862 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 SIX2Q9NPC8 291 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 GGT7Q9UJ14 662 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 PAXBP1Q9Y5B6 917 aa13.31□□□□□ -0.28
PTPN7-207ENST00000468385 GTPBP10A4D1E9 387 aaKnown RBP13.3□□□□□ -0.28
PTPN7-207ENST00000468385 C16orf96A6NNT2 1141 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 PYCARD-AS1I3L0S3 204 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 FOXN3O00409 490 aaPredicted RBP13.3□□□□□ -0.28
PTPN7-207ENST00000468385 MUSKO15146 869 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 TSPAN6O43657 245 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 GCATO75600 419 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 GKP32189 559 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 CDH5P33151 784 aaPredicted RBP13.3□□□□□ -0.28
PTPN7-207ENST00000468385 FLT3P36888 993 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 SCNN1AP37088 669 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 GABRB2P47870 512 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 GNA12Q03113 381 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 CLN3Q13286 438 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 SGCGQ13326 291 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 C1orf61Q13536 156 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 FAM102AQ5T9C2 384 aaPredicted RBP13.3□□□□□ -0.28
PTPN7-207ENST00000468385 TRNP1Q6NT89 227 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 FOXR1Q6PIV2 292 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 CLEC14AQ86T13 490 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 SLC35F3Q8IY50 421 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 WDR36Q8NI36 951 aaKnown RBP13.3□□□□□ -0.28
PTPN7-207ENST00000468385 BTN2A2Q8WVV5 523 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 CCDC97Q96F63 343 aaPredicted RBP13.3□□□□□ -0.28
PTPN7-207ENST00000468385 MED8Q96G25 268 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 HAPLN3Q96S86 360 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 TM6SF2Q9BZW4 377 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 ZYG11BQ9C0D3 744 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 ZDHHC6Q9H6R6 413 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 HECAQ9UBI9 543 aaPredicted RBP13.3□□□□□ -0.28
PTPN7-207ENST00000468385 SPASTQ9UBP0 616 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 APOBEC3BQ9UH17 382 aaKnown RBP13.3□□□□□ -0.28
PTPN7-207ENST00000468385 DNAJC12Q9UKB3 198 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 ITM2BQ9Y287 266 aa13.3□□□□□ -0.28
PTPN7-207ENST00000468385 DOCK4Q8N1I0 1966 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms