RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 EML5Q05BV3 1969 aa20.33■□□□□ 0.84
NPHP4-206ENST00000468253 NUP205Q92621 2012 aa20.32■□□□□ 0.84
NPHP4-206ENST00000468253 KPNA3O00505 521 aaPredicted RBP20.32■□□□□ 0.84
NPHP4-206ENST00000468253 NRDCO43847 1150 aa20.32■□□□□ 0.84
NPHP4-206ENST00000468253 PEX11BO96011 259 aa20.32■□□□□ 0.84
NPHP4-206ENST00000468253 ITGB7P26010 798 aa20.32■□□□□ 0.84
NPHP4-206ENST00000468253 HSPA9P38646 679 aaKnown RBP20.32■□□□□ 0.84
NPHP4-206ENST00000468253 SLC9A4Q6AI14 798 aa20.32■□□□□ 0.84
NPHP4-206ENST00000468253 ARHGAP36Q6ZRI8 547 aa20.32■□□□□ 0.84
NPHP4-206ENST00000468253 ZNF662Q6ZS27 426 aa20.32■□□□□ 0.84
NPHP4-206ENST00000468253 ERN2Q76MJ5 926 aaKnown RBP20.32■□□□□ 0.84
NPHP4-206ENST00000468253 LRRC57Q8N9N7 239 aa20.32■□□□□ 0.84
NPHP4-206ENST00000468253 OR14C36Q8NHC7 312 aa20.32■□□□□ 0.84
NPHP4-206ENST00000468253 VOPP1Q96AW1 172 aa20.32■□□□□ 0.84
NPHP4-206ENST00000468253 C6orf106Q9H6K1 298 aaPredicted RBP20.32■□□□□ 0.84
NPHP4-206ENST00000468253 TMEM74BQ9NUR3 256 aa20.32■□□□□ 0.84
NPHP4-206ENST00000468253 KLHL11Q9NVR0 708 aa20.32■□□□□ 0.84
NPHP4-206ENST00000468253 SUSD2Q9UGT4 822 aa20.32■□□□□ 0.84
NPHP4-206ENST00000468253 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.32■□□□□ 0.84
NPHP4-206ENST00000468253 PLXND1Q9Y4D7 1925 aa20.31■□□□□ 0.84
NPHP4-206ENST00000468253 PLRG1O43660 514 aaKnown RBP20.31■□□□□ 0.84
NPHP4-206ENST00000468253 GNSP15586 552 aa20.31■□□□□ 0.84
NPHP4-206ENST00000468253 CCNCP24863 283 aa20.31■□□□□ 0.84
NPHP4-206ENST00000468253 NUDT1P36639 197 aa20.31■□□□□ 0.84
NPHP4-206ENST00000468253 GARSP41250 739 aaKnown RBP20.31■□□□□ 0.84
NPHP4-206ENST00000468253 ADPRHP54922 357 aa20.31■□□□□ 0.84
NPHP4-206ENST00000468253 HNRNPDQ14103 355 aaKnown RBP20.31■□□□□ 0.84
NPHP4-206ENST00000468253 LBRQ14739 615 aaKnown RBP20.31■□□□□ 0.84
NPHP4-206ENST00000468253 DUOXA1Q1HG43 343 aa20.31■□□□□ 0.84
NPHP4-206ENST00000468253 ZNF805Q5CZA5 627 aa20.31■□□□□ 0.84
NPHP4-206ENST00000468253 AGBL4Q5VU57 503 aa20.31■□□□□ 0.84
NPHP4-206ENST00000468253 DCAF12L1Q5VU92 463 aa20.31■□□□□ 0.84
NPHP4-206ENST00000468253 KIAA0895LQ68EN5 471 aa20.31■□□□□ 0.84
NPHP4-206ENST00000468253 SLC23A3Q6PIS1 610 aa20.31■□□□□ 0.84
NPHP4-206ENST00000468253 NCEH1Q6PIU2 408 aa20.31■□□□□ 0.84
NPHP4-206ENST00000468253 SYCE1Q8N0S2 351 aa20.31■□□□□ 0.84
NPHP4-206ENST00000468253 BBS5Q8N3I7 341 aa20.31■□□□□ 0.84
NPHP4-206ENST00000468253 RYBPQ8N488 228 aaPredicted RBP20.31■□□□□ 0.84
NPHP4-206ENST00000468253 ATPAF2Q8N5M1 289 aa20.31■□□□□ 0.84
NPHP4-206ENST00000468253 EXD1Q8NHP7 514 aa20.31■□□□□ 0.84
NPHP4-206ENST00000468253 NSMCE1Q8WV22 266 aa20.31■□□□□ 0.84
NPHP4-206ENST00000468253 RAB7BQ96AH8 199 aa20.31■□□□□ 0.84
NPHP4-206ENST00000468253 ARRDC3Q96B67 414 aa20.31■□□□□ 0.84
NPHP4-206ENST00000468253 RNF25Q96BH1 459 aaPredicted RBP20.31■□□□□ 0.84
NPHP4-206ENST00000468253 ZNF641Q96N77 438 aaPredicted RBP20.31■□□□□ 0.84
NPHP4-206ENST00000468253 DESI2Q9BSY9 194 aa20.31■□□□□ 0.84
NPHP4-206ENST00000468253 TSGA10Q9BZW7 698 aa20.31■□□□□ 0.84
NPHP4-206ENST00000468253 DKK3Q9UBP4 350 aa20.31■□□□□ 0.84
NPHP4-206ENST00000468253 PRR5-ARHGAP8B1AHC4 643 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 KRIT1O00522 736 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 KHNYNO15037 678 aaKnown RBP20.3■□□□□ 0.84
NPHP4-206ENST00000468253 KRT1P04264 644 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 CDKN2BP42772 138 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 MAPK8P45983 427 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 NR2C2P49116 596 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 SUOXP51687 545 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 METAP1P53582 386 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 COPS2P61201 443 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 ARHGAP8P85298 464 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 SLC10A2Q12908 348 aaPredicted RBP20.3■□□□□ 0.84
NPHP4-206ENST00000468253 TFDP2Q14188 446 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 ATXN7L2Q5T6C5 722 aaPredicted RBP20.3■□□□□ 0.84
NPHP4-206ENST00000468253 PIP5KL1Q5T9C9 394 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 TIGD7Q6NT04 549 aaPredicted RBP20.3■□□□□ 0.84
NPHP4-206ENST00000468253 MFSD7Q6UXD7 560 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 GDPD4Q6W3E5 623 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 BZW1Q7L1Q6 419 aaKnown RBP20.3■□□□□ 0.84
NPHP4-206ENST00000468253 ARMCX6Q7L4S7 300 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 SRLQ86TD4 932 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 RGL4Q8IZJ4 473 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 TEX26Q8N6G2 289 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 PLD5Q8N7P1 536 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 NETO2Q8NC67 525 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 TSEN2Q8NCE0 465 aaKnown RBP20.3■□□□□ 0.84
NPHP4-206ENST00000468253 C1orf216Q8TAB5 229 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 GRIN3AQ8TCU5 1115 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.3■□□□□ 0.84
NPHP4-206ENST00000468253 BIRC7Q96CA5 298 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 TUBGCP5Q96RT8 1024 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 BRD8Q9H0E9 1235 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 ZDHHC6Q9H6R6 413 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 PREBQ9HCU5 417 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 DTLQ9NZJ0 730 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 AMACRQ9UHK6 382 aa20.3■□□□□ 0.84
NPHP4-206ENST00000468253 TBC1D3DA0A087WVF3 549 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 TBC1D3IA0A087WXS9 549 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 TBC1D3EA0A087X179 549 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 TBC1D3KA0A087X1G2 549 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 CCDC66A2RUB6 948 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 TBC1D3FA6NER0 549 aaPredicted RBP20.29■□□□□ 0.84
NPHP4-206ENST00000468253 MEI4A8MW99 385 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 TBC1D3LB9A6J9 549 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 APOL1O14791 398 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 MATN3O15232 486 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 AP1G1O43747 822 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 SERPINF2P08697 491 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 TBC1D3HP0C7X1 549 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 TNNT1P13805 278 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 CTNNA2P26232 953 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 CD27P26842 260 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms