RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 FBXL8Q96CD0 374 aa18.29■□□□□ 0.52
SNAPC3-205ENST00000467062 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.29■□□□□ 0.52
SNAPC3-205ENST00000467062 A0A1W2PPW3 197 aa18.29■□□□□ 0.52
SNAPC3-205ENST00000467062 C7orf72A4D263 438 aa18.29■□□□□ 0.52
SNAPC3-205ENST00000467062 SNAP91O60641 907 aa18.29■□□□□ 0.52
SNAPC3-205ENST00000467062 BEST1O76090 585 aa18.29■□□□□ 0.52
SNAPC3-205ENST00000467062 DCKP27707 260 aa18.29■□□□□ 0.52
SNAPC3-205ENST00000467062 IDH3AP50213 366 aa18.29■□□□□ 0.52
SNAPC3-205ENST00000467062 CCNA1P78396 465 aa18.29■□□□□ 0.52
SNAPC3-205ENST00000467062 OLIG2Q13516 323 aa18.29■□□□□ 0.52
SNAPC3-205ENST00000467062 PEX6Q13608 980 aa18.29■□□□□ 0.52
SNAPC3-205ENST00000467062 PPP2R5DQ14738 602 aa18.29■□□□□ 0.52
SNAPC3-205ENST00000467062 ZBTB6Q15916 424 aa18.29■□□□□ 0.52
SNAPC3-205ENST00000467062 NRF1Q16656 503 aa18.29■□□□□ 0.52
SNAPC3-205ENST00000467062 DGKDQ16760 1214 aa18.29■□□□□ 0.52
SNAPC3-205ENST00000467062 ZNF534Q76KX8 674 aa18.29■□□□□ 0.52
SNAPC3-205ENST00000467062 SLC15A4Q8N697 577 aa18.29■□□□□ 0.52
SNAPC3-205ENST00000467062 SHCBP1Q8NEM2 672 aa18.29■□□□□ 0.52
SNAPC3-205ENST00000467062 C1orf50Q9BV19 199 aa18.29■□□□□ 0.52
SNAPC3-205ENST00000467062 KLHL25Q9H0H3 589 aa18.29■□□□□ 0.52
SNAPC3-205ENST00000467062 DAPK2Q9UIK4 370 aa18.29■□□□□ 0.52
SNAPC3-205ENST00000467062 IFT52Q9Y366 437 aa18.29■□□□□ 0.52
SNAPC3-205ENST00000467062 SMIM28A0A1B0GU29 152 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 ANKRD34BA5PLL1 514 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 NELFEP18615 380 aaKnown RBP18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 EPHA3P29320 983 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 GMPRP36959 345 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 BNIP3Q12983 259 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 DUSP28Q4G0W2 176 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 ANKRD26P1Q6NSI1 321 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 C16orf46Q6P387 395 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 ZCCHC23Q6ZST2 131 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 VASH1Q7L8A9 365 aaPredicted RBP18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 ZNF354CQ86Y25 554 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 BHLHE22Q8NFJ8 381 aaPredicted RBP18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 BEST2Q8NFU1 509 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 BRI3BPQ8WY22 251 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 CSPG4P5Q96PW8 444 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 FRMD8Q9BZ67 464 aaPredicted RBP18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 VPS28Q9UK41 221 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 KPNA7A9QM74 516 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 NOL3O60936 208 aaKnown RBP18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 ZMPSTE24O75844 475 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 HSPA8P11142 646 aaKnown RBP18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 TGM2P21980 687 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 TCEA1P23193 301 aaKnown RBP18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 OXA1LQ15070 435 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 FBXO47Q5MNV8 452 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 LDLRAD1Q5T700 205 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 CASC4Q6P4E1 433 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 BNC2Q6ZN30 1099 aaPredicted RBP18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 ADAM32Q8TC27 787 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 PDCD6IPQ8WUM4 868 aaKnown RBP18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 MS4A4AQ96JQ5 239 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 DTLQ9NZJ0 730 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 SEPT10Q9P0V9 454 aa18.28■□□□□ 0.52
SNAPC3-205ENST00000467062 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.27■□□□□ 0.52
SNAPC3-205ENST00000467062 E2F8A0AVK6 867 aa18.27■□□□□ 0.52
SNAPC3-205ENST00000467062 BCLAF3A2AJT9 711 aaKnown RBP18.27■□□□□ 0.52
SNAPC3-205ENST00000467062 ALOX5P09917 674 aa18.27■□□□□ 0.52
SNAPC3-205ENST00000467062 SMIM10L2AP0DMW4 78 aa18.27■□□□□ 0.52
SNAPC3-205ENST00000467062 SMIM10L2BP0DMW5 78 aa18.27■□□□□ 0.52
SNAPC3-205ENST00000467062 CRHR1P34998 444 aa18.27■□□□□ 0.52
SNAPC3-205ENST00000467062 RCVRNP35243 200 aa18.27■□□□□ 0.52
SNAPC3-205ENST00000467062 FGD3Q5JSP0 725 aa18.27■□□□□ 0.52
SNAPC3-205ENST00000467062 AARS2Q5JTZ9 985 aaKnown RBP18.27■□□□□ 0.52
SNAPC3-205ENST00000467062 MINDY2Q8NBR6 621 aa18.27■□□□□ 0.52
SNAPC3-205ENST00000467062 ARRDC4Q8NCT1 418 aa18.27■□□□□ 0.52
SNAPC3-205ENST00000467062 ZNF778Q96MU6 729 aa18.27■□□□□ 0.52
SNAPC3-205ENST00000467062 TINF2Q9BSI4 451 aa18.27■□□□□ 0.52
SNAPC3-205ENST00000467062 MROQ9BYG7 248 aa18.27■□□□□ 0.52
SNAPC3-205ENST00000467062 CEP44Q9C0F1 390 aa18.27■□□□□ 0.52
SNAPC3-205ENST00000467062 RIC8BQ9NVN3 520 aa18.27■□□□□ 0.52
SNAPC3-205ENST00000467062 MAGED2Q9UNF1 606 aaPredicted RBP18.27■□□□□ 0.52
SNAPC3-205ENST00000467062 HMX2A2RU54 273 aa18.27■□□□□ 0.51
SNAPC3-205ENST00000467062 SLC1A6P48664 564 aa18.27■□□□□ 0.51
SNAPC3-205ENST00000467062 IKBKEQ14164 716 aa18.27■□□□□ 0.51
SNAPC3-205ENST00000467062 SF3B4Q15427 424 aaKnown RBP eCLIP18.27■□□□□ 0.511e-7■■□□□ 13.7
SNAPC3-205ENST00000467062 CES3Q6UWW8 571 aa18.27■□□□□ 0.51
SNAPC3-205ENST00000467062 ITIH5Q86UX2 942 aa18.27■□□□□ 0.51
SNAPC3-205ENST00000467062 CPNE9Q8IYJ1 553 aa18.27■□□□□ 0.51
SNAPC3-205ENST00000467062 DEFB106AQ8N104 65 aa18.27■□□□□ 0.51
SNAPC3-205ENST00000467062 SIGLEC10Q96LC7 697 aa18.27■□□□□ 0.51
SNAPC3-205ENST00000467062 ZNF641Q96N77 438 aaPredicted RBP18.27■□□□□ 0.51
SNAPC3-205ENST00000467062 ZNF670Q9BS34 389 aa18.27■□□□□ 0.51
SNAPC3-205ENST00000467062 CDH19Q9H159 772 aa18.27■□□□□ 0.51
SNAPC3-205ENST00000467062 COQ10BQ9H8M1 238 aa18.27■□□□□ 0.51
SNAPC3-205ENST00000467062 MYO18AQ92614 2054 aaKnown RBP18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 TMX2-CTNND1H3BSU7 103 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 DPYSL4O14531 572 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 MDM4O15151 490 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 TREHO43280 583 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 KRT75O95678 551 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 STAU1O95793 577 aaKnown RBP18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 APOEP02649 317 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 S100BP04271 92 aaPredicted RBP18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 XRCC1P18887 633 aaPredicted RBP18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 SESN2P58004 480 aaPredicted RBP18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 ADIGQ0VDE8 80 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 NME3Q13232 169 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms