RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 J3KR12 359 aa3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 EYA2O00167 538 aa3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 CCNT1O60563 726 aaKnown RBP3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 YWHAQP27348 245 aa3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 RFC1P35251 1148 aaPredicted RBP3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 BRWD1-AS2P59051 145 aa3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 TNFAIP2Q03169 654 aa3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 DDR1Q08345 913 aa3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 DLG1Q12959 904 aa3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 PDCLQ13371 301 aa3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 DHX34Q14147 1143 aaKnown RBP3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 SLC39A14Q15043 492 aa3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 SMAD1Q15797 465 aaKnown RBP3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 OTUD3Q5T2D3 398 aaPredicted RBP3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 SULT6B1Q6IMI4 303 aa3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 CCSAPQ6IQ19 270 aaPredicted RBP3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 RETSATQ6NUM9 610 aa3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 RINLQ6ZS11 566 aa3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 TMC8Q8IU68 726 aa3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 CACNA2D3Q8IZS8 1091 aa3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 SPATA20Q8TB22 786 aa3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 TMEM255BQ8WV15 326 aa3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 KTI12Q96EK9 354 aaPredicted RBP3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 BICD1Q96G01 975 aa3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 ELAC2Q9BQ52 826 aaKnown RBP3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 PLEKHA2Q9HB19 425 aa3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 CLDN16Q9Y5I7 305 aa3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 A0A1B0GVM2 712 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 KDM4EB2RXH2 506 aaPredicted RBP3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 PRAC2D3DTV9 90 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 METTL18O95568 372 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 IGHV4-30-4P0DP06 118 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 VEGFAP15692 232 aaPredicted RBP3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 CTPS1P17812 591 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 FMO4P31512 558 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 PNPLA4P41247 253 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 PTPN9P43378 593 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 GPR12P47775 334 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 HILS1P60008 231 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 SLC18A2Q05940 514 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 FOXO1Q12778 655 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 BYSLQ13895 437 aaKnown RBP3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 SF3B4Q15427 424 aaKnown RBP eCLIP3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 ME3Q16798 604 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 TMEM268Q5VZI3 342 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 HIST2H2BCQ6DN03 193 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 KLHL17Q6TDP4 642 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 SYNE3Q6ZMZ3 975 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 CCDC129Q6ZRS4 1044 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 TOGARAM2Q6ZUX3 1019 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 AADATQ8N5Z0 425 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 ATG16L2Q8NAA4 619 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 SETD9Q8NE22 299 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 MCPH1Q8NEM0 835 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 SVIPQ8NHG7 77 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 OTUD7AQ8TE49 926 aaPredicted RBP3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 SORCS1Q8WY21 1168 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 ATOH1Q92858 354 aaPredicted RBP3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 C3orf49Q96BT1 292 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 BRD8Q9H0E9 1235 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 NLKQ9UBE8 527 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 NOTCH3Q9UM47 2321 aa3.1□□□□□ -1.91
GTF3C3-209ENST00000466862 CPED1A4D0V7 1026 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 OR6C68A6NDL8 312 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 PRR23AA6NEV1 266 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 PRC1O43663 620 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 PAK4O96013 591 aaPredicted RBP3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 TFRCP02786 760 aaKnown RBP3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 KRT18P05783 430 aaKnown RBP3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 CENPAP49450 140 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 PRKAA2P54646 552 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 ARL16Q0P5N6 197 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 ST3GAL1Q11201 340 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 RPS6KA2Q15349 733 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 PUM3Q15397 648 aaKnown RBP3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 XKR9Q5GH70 373 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 NCAPH2Q6IBW4 605 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 FBXL22Q6P050 247 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 GJB7Q6PEY0 223 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 RHBDF2Q6PJF5 856 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 RRAGAQ7L523 313 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 PGBD5Q8N414 524 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 WBP1Q96G27 269 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 SCMH1Q96GD3 660 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 CRB3Q9BUF7 120 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 EBF2Q9HAK2 575 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 TCF7L2Q9NQB0 619 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 ATP8A2Q9NTI2 1148 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 TMEM51Q9NW97 253 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 DACT1Q9NYF0 836 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 BAG5Q9UL15 447 aa3.09□□□□□ -1.91
GTF3C3-209ENST00000466862 SAA2-SAA4A0A096LPE2 208 aa3.08□□□□□ -1.92
GTF3C3-209ENST00000466862 A0A096LPK6 155 aa3.08□□□□□ -1.92
GTF3C3-209ENST00000466862 ABHD14A-ACY1A0A1B0GW23 586 aa3.08□□□□□ -1.92
GTF3C3-209ENST00000466862 MAGEA13PA6NCF6 341 aa3.08□□□□□ -1.92
GTF3C3-209ENST00000466862 FAM157AC9JC47 383 aa3.08□□□□□ -1.92
GTF3C3-209ENST00000466862 CHL1O00533 1208 aa3.08□□□□□ -1.92
GTF3C3-209ENST00000466862 CH25HO95992 272 aa3.08□□□□□ -1.92
GTF3C3-209ENST00000466862 CGAP01215 116 aa3.08□□□□□ -1.92
GTF3C3-209ENST00000466862 TTKP33981 857 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms