RNA–Protein interactions for RNA: ENST00000466829.5

COL16A1-207, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 254 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-207ENST00000466829 IL21RQ9HBE5 538 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 ATP13A1Q9HD20 1204 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 DYRK4Q9NR20 520 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 ANKRD6Q9Y2G4 727 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.34■□□□□ 0.21
COL16A1-207ENST00000466829 SLCO1B1Q9Y6L6 691 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 TNRC6BQ9UPQ9 1833 aaKnown RBP16.33■□□□□ 0.21
COL16A1-207ENST00000466829 CEP192Q8TEP8 1941 aa16.33■□□□□ 0.21
COL16A1-207ENST00000466829 ILVBLA1L0T0 632 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 UPK3BL1B0FP48 263 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 UPK3BL2E5RIL1 263 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 K7ERQ8 282 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 PLK4O00444 970 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 MCF2LO15068 1137 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 SRCP12931 536 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 CD59P13987 128 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 CXCR5P32302 372 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 ADPRHP54922 357 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 RPL7AP62424 266 aaKnown RBP16.33■□□□□ 0.2
COL16A1-207ENST00000466829 KIF19Q2TAC6 998 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 LRRC38Q5VT99 294 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 LAYNQ6UX15 382 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 ZNF783Q6ZMS7 281 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 PIP4P1Q86T03 277 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 ZNF354CQ86Y25 554 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 C1orf216Q8TAB5 229 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 PIP4K2CQ8TBX8 421 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 UBXN4Q92575 508 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 CAPZA3Q96KX2 299 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 CAMK1GQ96NX5 476 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 MCEEQ96PE7 176 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 NCAPGQ9BPX3 1015 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 ACE2Q9BYF1 805 aaPredicted RBP16.33■□□□□ 0.2
COL16A1-207ENST00000466829 TRIM7Q9C029 511 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 PPARGC1AQ9UBK2 798 aaKnown RBP16.33■□□□□ 0.2
COL16A1-207ENST00000466829 HS3ST2Q9Y278 367 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 SNX11Q9Y5W9 270 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 PI4KAP42356 2102 aa16.33■□□□□ 0.2
COL16A1-207ENST00000466829 A0A1W2PPC4 97 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 KPNA3O00505 521 aaPredicted RBP16.32■□□□□ 0.2
COL16A1-207ENST00000466829 ALOX15BO15296 676 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 PSTPIP1O43586 416 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 CEP104O60308 925 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 IGHV4-34P06331 123 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 GLDCP23378 1020 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 GRIA4P48058 902 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 CLCN6P51797 869 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 METAP1P53582 386 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 HDAC4P56524 1084 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 RWDD2BP57060 319 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 RACK1P63244 317 aaKnown RBP16.32■□□□□ 0.2
COL16A1-207ENST00000466829 GNA12Q03113 381 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 CCDC15Q0P6D6 951 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 HNRNPDQ14103 355 aaKnown RBP16.32■□□□□ 0.2
COL16A1-207ENST00000466829 NAXDQ8IW45 347 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 RHOT1Q8IXI2 618 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 CCDC185Q8N715 623 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 TBC1D31Q96DN5 1066 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 SERAC1Q96JX3 654 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 SLC6A18Q96N87 628 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 NAP1L3Q99457 506 aaPredicted RBP16.32■□□□□ 0.2
COL16A1-207ENST00000466829 OSBPL2Q9H1P3 480 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 TNKS2Q9H2K2 1166 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 TM7SF3Q9NS93 570 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 SARDHQ9UL12 918 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 PPM1HQ9ULR3 514 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 HPCAL4Q9UM19 191 aa16.32■□□□□ 0.2
COL16A1-207ENST00000466829 FNDC3AQ9Y2H6 1198 aaKnown RBP16.32■□□□□ 0.2
COL16A1-207ENST00000466829 PDE2AO00408 941 aaPredicted RBP16.31■□□□□ 0.2
COL16A1-207ENST00000466829 DYNC1I1O14576 645 aa16.31■□□□□ 0.2
COL16A1-207ENST00000466829 SMAD6O43541 496 aaKnown RBP16.31■□□□□ 0.2
COL16A1-207ENST00000466829 RHOQP17081 205 aa16.31■□□□□ 0.2
COL16A1-207ENST00000466829 MAT2AP31153 395 aaKnown RBP16.31■□□□□ 0.2
COL16A1-207ENST00000466829 CHRNA3P32297 505 aa16.31■□□□□ 0.2
COL16A1-207ENST00000466829 DRD3P35462 400 aa16.31■□□□□ 0.2
COL16A1-207ENST00000466829 ETFBP38117 255 aa16.31■□□□□ 0.2
COL16A1-207ENST00000466829 CCR5P51681 352 aa16.31■□□□□ 0.2
COL16A1-207ENST00000466829 BNC1Q01954 994 aa16.31■□□□□ 0.2
COL16A1-207ENST00000466829 SLC20A2Q08357 652 aa16.31■□□□□ 0.2
COL16A1-207ENST00000466829 CNTN1Q12860 1018 aa16.31■□□□□ 0.2
COL16A1-207ENST00000466829 SUZ12Q15022 739 aaKnown RBP16.31■□□□□ 0.2
COL16A1-207ENST00000466829 TRIP6Q15654 476 aaKnown RBP16.31■□□□□ 0.2
COL16A1-207ENST00000466829 SLC45A4Q5BKX6 768 aa16.31■□□□□ 0.2
COL16A1-207ENST00000466829 EFHC2Q5JST6 749 aa16.31■□□□□ 0.2
COL16A1-207ENST00000466829 PRPF39Q86UA1 669 aaKnown RBP16.31■□□□□ 0.2
COL16A1-207ENST00000466829 GRIN3AQ8TCU5 1115 aa16.31■□□□□ 0.2
COL16A1-207ENST00000466829 CENPIQ92674 756 aaPredicted RBP16.31■□□□□ 0.2
COL16A1-207ENST00000466829 TPX2Q9ULW0 747 aaKnown RBP16.31■□□□□ 0.2
COL16A1-207ENST00000466829 NUMA1Q14980 2115 aa16.3■□□□□ 0.2
COL16A1-207ENST00000466829 FAM72CH0Y354 149 aa16.3■□□□□ 0.2
COL16A1-207ENST00000466829 PGRMC1O00264 195 aaKnown RBP16.3■□□□□ 0.2
COL16A1-207ENST00000466829 SLC7A4O43246 635 aa16.3■□□□□ 0.2
COL16A1-207ENST00000466829 CREB3O43889 395 aa16.3■□□□□ 0.2
COL16A1-207ENST00000466829 GJB3O75712 270 aa16.3■□□□□ 0.2
COL16A1-207ENST00000466829 LRIG2O94898 1065 aa16.3■□□□□ 0.2
COL16A1-207ENST00000466829 PRNPP04156 253 aa16.3■□□□□ 0.2
COL16A1-207ENST00000466829 SPINK2P20155 84 aa16.3■□□□□ 0.2
COL16A1-207ENST00000466829 PSMA2P25787 234 aa16.3■□□□□ 0.2
COL16A1-207ENST00000466829 MAPKAPK2P49137 400 aa16.3■□□□□ 0.2
COL16A1-207ENST00000466829 ZNF143P52747 638 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms