RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 FAM207AQ9NSI2 230 aaPredicted RBP12.69□□□□□ -0.38
SOX2-OT-203ENST00000466034 NDFIP2Q9NV92 336 aa12.69□□□□□ -0.38
SOX2-OT-203ENST00000466034 FCF1Q9Y324 198 aaKnown RBP12.69□□□□□ -0.38
SOX2-OT-203ENST00000466034 LOC400499M0QZD8 3231 aa12.69□□□□□ -0.38
SOX2-OT-203ENST00000466034 FAM72CH0Y354 149 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 PIAS2O75928 621 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 LRIG2O94898 1065 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 CALB1P05937 261 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 PLEKP08567 350 aaPredicted RBP12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 GIMD1P0DJR0 217 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 KRT3P12035 628 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 NSFP46459 744 aaKnown RBP12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 COPB1P53618 953 aaKnown RBP12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 CLDN6P56747 220 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 FOXK1P85037 733 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 TARDBPQ13148 414 aaKnown RBP eCLIP12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 FGL2Q14314 439 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 CLEC16AQ2KHT3 1053 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 FAM72AQ5TYM5 149 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 FAM72DQ6L9T8 149 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 FAM72BQ86X60 149 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 DCBLD1Q8N8Z6 715 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 C3orf20Q8ND61 904 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 DENND6BQ8NEG7 585 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 SLC30A5Q8TAD4 765 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 GPT2Q8TD30 523 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 FAM172AQ8WUF8 416 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 HNRNPLLQ8WVV9 542 aaKnown RBP12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 VOPP1Q96AW1 172 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 BMFQ96LC9 184 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 CALN1Q9BXU9 219 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 ADAM22Q9P0K1 906 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 LIMA1Q9UHB6 759 aaKnown RBP12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 ACTL7AQ9Y615 435 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 BAHCC1Q9P281 2608 aa12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 TDRD6O60522 2096 aaKnown RBP12.68□□□□□ -0.38
SOX2-OT-203ENST00000466034 FASNP49327 2511 aaKnown RBP12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 ZSCAN5CA6NGD5 496 aaPredicted RBP12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 LRRC10BA6NIK2 292 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 SIGLEC16A6NMB1 481 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 C16orf96A6NNT2 1141 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 LGALS16A8MUM7 142 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 TSPAN6O43657 245 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 RAMP2O60895 175 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 GJB6O95452 261 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 ALPPL2P10696 532 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 CKMT1AP12532 417 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 GPD1P21695 349 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 RFC1P35251 1148 aaPredicted RBP12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 RABIFP47224 123 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 DNA2P51530 1060 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 CLDN2P57739 230 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 HNRNPKP61978 463 aaKnown RBP eCLIP12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 SNRPD1P62314 119 aaKnown RBP12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 INSM1Q01101 510 aaPredicted RBP12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 POLD3Q15054 466 aaPredicted RBP12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 SYCP1Q15431 976 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 HS1BP3Q53T59 392 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 ZNF805Q5CZA5 627 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 RWDD4Q6NW29 188 aaKnown RBP12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 WDR59Q6PJI9 974 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 Q6ZSR6 202 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 CCDC185Q8N715 623 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 FAM181AQ8N9Y4 354 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 NEK11Q8NG66 645 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 OR2AP1Q8NGE2 309 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 CASKIN2Q8WXE0 1202 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 ERGIC2Q96RQ1 377 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 KLF6Q99612 283 aaPredicted RBP12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 SELENOOQ9BVL4 669 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 C1QTNF2Q9BXJ5 285 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 OSBPL1AQ9BXW6 950 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 TM6SF2Q9BZW4 377 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 ZDHHC6Q9H6R6 413 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 USP29Q9HBJ7 922 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 FANCLQ9NW38 375 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 UCKL1Q9NWZ5 548 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 NLGN3Q9NZ94 848 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 DNAI1Q9UI46 699 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 HPCAL4Q9UM19 191 aa12.67□□□□□ -0.38
SOX2-OT-203ENST00000466034 SPTY2D1-AS1A0A0U1RR47 76 aa12.66□□□□□ -0.38
SOX2-OT-203ENST00000466034 TCRBV5S1A1TA0A578 114 aa12.66□□□□□ -0.38
SOX2-OT-203ENST00000466034 POM121BA6NF01 834 aa12.66□□□□□ -0.38
SOX2-OT-203ENST00000466034 NEMP2A6NFY4 417 aa12.66□□□□□ -0.38
SOX2-OT-203ENST00000466034 WASH4PA8MWX3 477 aa12.66□□□□□ -0.38
SOX2-OT-203ENST00000466034 SCAMP1O15126 338 aa12.66□□□□□ -0.38
SOX2-OT-203ENST00000466034 RAD51BO15315 384 aa12.66□□□□□ -0.38
SOX2-OT-203ENST00000466034 KDELR3O43731 214 aa12.66□□□□□ -0.38
SOX2-OT-203ENST00000466034 POP4O95707 220 aaKnown RBP12.66□□□□□ -0.38
SOX2-OT-203ENST00000466034 PAK4O96013 591 aaPredicted RBP12.66□□□□□ -0.38
SOX2-OT-203ENST00000466034 CSF2P04141 144 aa12.66□□□□□ -0.38
SOX2-OT-203ENST00000466034 ABL2P42684 1182 aa12.66□□□□□ -0.38
SOX2-OT-203ENST00000466034 AIF1P55008 147 aa12.66□□□□□ -0.38
SOX2-OT-203ENST00000466034 DAB2P98082 770 aa12.66□□□□□ -0.38
SOX2-OT-203ENST00000466034 FZD2Q14332 565 aa12.66□□□□□ -0.38
SOX2-OT-203ENST00000466034 MYLK3Q32MK0 819 aa12.66□□□□□ -0.38
SOX2-OT-203ENST00000466034 MON1BQ7L1V2 547 aa12.66□□□□□ -0.38
SOX2-OT-203ENST00000466034 PTAR1Q7Z6K3 402 aaPredicted RBP12.66□□□□□ -0.38
SOX2-OT-203ENST00000466034 PHLDB2Q86SQ0 1253 aa12.66□□□□□ -0.38
SOX2-OT-203ENST00000466034 ANKRD20A12PQ8NF67 263 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms