RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278		B9A039	149 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	C1QL1	O75973	258 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TPM2	P07951	284 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	ATF7	P17544	494 aa	Predicted RBP	5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TNNT2	P45379	298 aa	Predicted RBP	5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	PRKAA2	P54646	552 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	RNASEL	Q05823	741 aa	Known RBP	5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	SIGLEC14	Q08ET2	396 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	GAB1	Q13480	694 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TRIM60	Q495X7	471 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	STRIP1	Q5VSL9	837 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TANGO2	Q6ICL3	276 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	DCDC5	Q6ZRR9	648 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	CHSY1	Q86X52	802 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	NGEF	Q8N5V2	710 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	ADAMTS18	Q8TE60	1221 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	NPIPB3	Q92617	1050 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	RSC1A1	Q92681	617 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	KAZALD1	Q96I82	304 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	ABHD10	Q9NUJ1	306 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	KIF17	Q9P2E2	1029 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	SERGEF	Q9UGK8	458 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	KCND3	Q9UK17	655 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	NIP7	Q9Y221	180 aa	Known RBP eCLIP	5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	GPR52	Q9Y2T5	361 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	PCDHA10	Q9Y5I2	948 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	SHROOM3	Q8TF72	1996 aa		5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	IBTK	Q9P2D0	1353 aa	Predicted RBP	5.52	□□□□□ -1.53
CACNA1C-223	ENST00000465278	LOC105369274	A0A096LPK9	316 aa		5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	LOC102723532	A0A0G2JNH3	316 aa		5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	STARD3NL	O95772	234 aa		5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	PLA2G2A	P14555	144 aa		5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	SSR1	P43307	286 aa	Known RBP	5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	AGTR2	P50052	363 aa		5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	SF3A3	Q12874	501 aa	Known RBP eCLIP	5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	FAM187B	Q17R55	369 aa		5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	KRTAP21-3	Q3LHN1	58 aa		5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	LCE5A	Q5TCM9	118 aa		5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	NFRKB	Q6P4R8	1299 aa		5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	KYAT3	Q6YP21	454 aa	Known RBP	5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	SLC39A5	Q6ZMH5	540 aa		5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	RINL	Q6ZS11	566 aa		5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	ANKRD23	Q86SG2	305 aa		5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	OR4N4	Q8N0Y3	316 aa		5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	BOLL	Q8N9W6	283 aa	Known RBP	5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	PNLDC1	Q8NA58	520 aa	Known RBP	5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	NEK9	Q8TD19	979 aa		5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	AFG1L	Q8WV93	481 aa		5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	SARAF	Q96BY9	339 aa		5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	ZNF830	Q96NB3	372 aa	Predicted RBP	5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	PAAF1	Q9BRP4	392 aa		5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	DDX23	Q9BUQ8	820 aa	Known RBP	5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	DEFB129	Q9H1M3	183 aa		5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	RAI14	Q9P0K7	980 aa		5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	CDK5RAP2	Q96SN8	1893 aa		5.51	□□□□□ -1.53
CACNA1C-223	ENST00000465278	SALL1	Q9NSC2	1324 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	LOC285556	D6RIA3	1793 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TMEM8B	A6NDV4	472 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	ENO4	A6NNW6	628 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	EFCAB8	A8MWE9	144 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278		H0Y3Z8	333 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	PDHX	O00330	501 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	DNM1L	O00429	736 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	KAT7	O95251	611 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	CST5	P28325	142 aa	Predicted RBP	5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	VPS41	P49754	854 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	FAM3B	P58499	235 aa	Predicted RBP	5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	RPL15	P61313	204 aa	Known RBP	5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	WDR5	P61964	334 aa	Known RBP	5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	SLC14A1	Q13336	389 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	VGLL4	Q14135	290 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	MYBPC2	Q14324	1141 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	PRAMEF17	Q5VTA0	474 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	RAB11FIP2	Q7L804	512 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	SYT13	Q7L8C5	426 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	CPXCR1	Q8N123	301 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	LINC01465	Q8N7H1	131 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	FAM98A	Q8NCA5	519 aa	Known RBP	5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	OR52L2P	Q8NGH6	319 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	KCNG4	Q8TDN1	519 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TRIB2	Q92519	343 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	COG3	Q96JB2	828 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	SAYSD1	Q9NPB0	183 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	RXFP3	Q9NSD7	469 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	LIN7C	Q9NUP9	197 aa	Known RBP	5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	RBM28	Q9NW13	759 aa	Known RBP	5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	POLK	Q9UBT6	870 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	DGKB	Q9Y6T7	804 aa		5.5	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TBC1D3D	A0A087WVF3	549 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TBC1D3I	A0A087WXS9	549 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TBC1D3E	A0A087X179	549 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TBC1D3K	A0A087X1G2	549 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TBC1D3B	A6NDS4	549 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TBC1D3F	A6NER0	549 aa	Predicted RBP	5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	AGAP5	A6NIR3	686 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	EIF4E1B	A6NMX2	242 aa	Known RBP	5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	C16orf96	A6NNT2	1141 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	TBC1D3L	B9A6J9	549 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278		E7EVH7	732 aa		5.49	□□□□□ -1.53
CACNA1C-223	ENST00000465278	POC1B-GALNT4	F8VUJ3	575 aa		5.49	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms