RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 ATP5BP06576 529 aaKnown RBP17.2■□□□□ 0.34
EXOSC3-203ENST00000465229 CCNB1P14635 433 aa17.2■□□□□ 0.34
EXOSC3-203ENST00000465229 CD72P21854 359 aa17.2■□□□□ 0.34
EXOSC3-203ENST00000465229 STIP1P31948 543 aaKnown RBP17.2■□□□□ 0.34
EXOSC3-203ENST00000465229 NRLP54845 237 aa17.2■□□□□ 0.34
EXOSC3-203ENST00000465229 SLC20A2Q08357 652 aa17.2■□□□□ 0.34
EXOSC3-203ENST00000465229 SLC10A7Q0GE19 358 aa17.2■□□□□ 0.34
EXOSC3-203ENST00000465229 WASHC5Q12768 1159 aa17.2■□□□□ 0.34
EXOSC3-203ENST00000465229 HNRNPDQ14103 355 aaKnown RBP17.2■□□□□ 0.34
EXOSC3-203ENST00000465229 EIF4HQ15056 248 aaKnown RBP17.2■□□□□ 0.34
EXOSC3-203ENST00000465229 HEATR6Q6AI08 1181 aaKnown RBP17.2■□□□□ 0.34
EXOSC3-203ENST00000465229 FSTL4Q6MZW2 842 aa17.2■□□□□ 0.34
EXOSC3-203ENST00000465229 UBALD2Q8IYN6 164 aa17.2■□□□□ 0.34
EXOSC3-203ENST00000465229 FAM71DQ8N9W8 422 aa17.2■□□□□ 0.34
EXOSC3-203ENST00000465229 CYB5D2Q8WUJ1 264 aa17.2■□□□□ 0.34
EXOSC3-203ENST00000465229 ZNF419Q96HQ0 510 aaPredicted RBP17.2■□□□□ 0.34
EXOSC3-203ENST00000465229 RPL10LQ96L21 214 aaKnown RBP17.2■□□□□ 0.34
EXOSC3-203ENST00000465229 ZNF599Q96NL3 588 aa17.2■□□□□ 0.34
EXOSC3-203ENST00000465229 UBA2Q9UBT2 640 aaPredicted RBP17.2■□□□□ 0.34
EXOSC3-203ENST00000465229 HCN2Q9UL51 889 aa17.2■□□□□ 0.34
EXOSC3-203ENST00000465229 CA14Q9ULX7 337 aa17.2■□□□□ 0.34
EXOSC3-203ENST00000465229 NYNRINQ9P2P1 1898 aaKnown RBP17.2■□□□□ 0.34
EXOSC3-203ENST00000465229 CXorf51AA0A1B0GTR3 108 aa17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 SRRM3A6NNA2 597 aaPredicted RBP17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 K7EQS6 105 aa17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 SGK1O00141 431 aa17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 KCNN4O15554 427 aa17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 TCEA3O75764 348 aa17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 JCHAINP01591 159 aa17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 SHBGP04278 402 aa17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 DLDP09622 509 aaKnown RBP17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 TNFRSF4P43489 277 aa17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 VPS41P49754 854 aa17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 STK19P49842 368 aaPredicted RBP17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 GDF10P55107 478 aa17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 ZBTB17Q13105 803 aa17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 PTPRNQ16849 979 aa17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 INO80DQ53TQ3 878 aaPredicted RBP17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 NUDT18Q6ZVK8 323 aa17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 CCDC25Q86WR0 208 aa17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 FAM3CQ92520 227 aa17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 MRGPRX3Q96LB0 322 aa17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 STMN4Q9H169 189 aaPredicted RBP17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 ARHGEF3Q9NR81 526 aa17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 SEPT10Q9P0V9 454 aa17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 SLCO3A1Q9UIG8 710 aa17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 ERVW-1Q9UQF0 538 aa17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 HS3ST2Q9Y278 367 aa17.19■□□□□ 0.34
EXOSC3-203ENST00000465229 CFAP69A5D8W1 941 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 KRBA1A5PL33 1030 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 K7ERQ8 282 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 MAN2B1O00754 1011 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 MTSS1O43312 755 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 SMAD6O43541 496 aaKnown RBP17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 EGFP01133 1207 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 ASLP04424 464 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 DRD1P21728 446 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 PTPN3P26045 913 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 IFI35P80217 286 aaPredicted RBP17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 PRKCQQ04759 706 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 GRSF1Q12849 480 aaKnown RBP eCLIP17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 GPS1Q13098 491 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 LBRQ14739 615 aaKnown RBP17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 CYTH1Q15438 398 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 TMCO4Q5TGY1 634 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 TEX26Q8N6G2 289 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 USP33Q8TEY7 942 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 NSMCE1Q8WV22 266 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 IL12RB2Q99665 862 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 CEP41Q9BYV8 373 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 RBM22Q9NW64 420 aaKnown RBP eCLIP17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 SLC25A13Q9UJS0 675 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 FBXL21Q9UKT6 434 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 STARD13Q9Y3M8 1113 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 MYO18AQ92614 2054 aaKnown RBP17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 RNF103O00237 685 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 AGTP01019 485 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 ABHD2P08910 425 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 SRCP12931 536 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 SERPINH1P50454 418 aaKnown RBP17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 RENBPP51606 427 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 GEMIN4P57678 1058 aaKnown RBP17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 RFTN1Q14699 578 aaPredicted RBP17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 TEX44Q53QW1 395 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 TNFAIP8L3Q5GJ75 292 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 RNASEH2BQ5TBB1 312 aaKnown RBP17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 MARC1Q5VT66 337 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 CNTD1Q8N815 330 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 ATP11CQ8NB49 1132 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 GLIS1Q8NBF1 620 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 RTP4Q96DX8 246 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 MYO19Q96H55 970 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 FERMT1Q9BQL6 677 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 CENPHQ9H3R5 247 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 PLA2G4CQ9UP65 541 aa17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 FARP1Q9Y4F1 1045 aaPredicted RBP17.18■□□□□ 0.34
EXOSC3-203ENST00000465229 MIA3Q5JRA6 1907 aa17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 KIAA1549LQ6ZVL6 1849 aa17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.17■□□□□ 0.34
EXOSC3-203ENST00000465229 C5orf60A6NFR6 353 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms